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The map label for this gene is traB [H]

Identifier: 46447059

GI number: 46447059

Start: 1699404

End: 1700630

Strand: Direct

Name: traB [H]

Synonym: pc1425

Alternate gene names: 46447059

Gene position: 1699404-1700630 (Clockwise)

Preceding gene: 46447058

Following gene: 46447062

Centisome position: 70.38

GC content: 42.46

Gene sequence:

>1227_bases
GTGTTTGGTTTGATCAAATATGCATATGATCATTATGAACCCACTTCTTATGACTTATTTGAACCAAGGATCGATTTACC
TGTGGATGAATTTCAATCCAAAGAAGTGTGGATGGATCGTTTGGAAACGCAAGTGGGCTTCTTGATCCAAAAGCAAAAGT
ACTATGAAGAGACGTTACTTGAGTATAAAGAAAGAGAAAGAGCGAACGAAAAAGAGAAAATCGAACTCAAGCAGTATTTG
ACTCTTTTGAAAAAGAAAATGGAAGCATCCCAAGTTAGAGAAGAGGAGTTAAAGAATAAAAAGGATACCTCAGCTCTAGA
AATAGCCTCTTCAAGCAAAAACACATTTGACCGCCCCGTGTTTGAGCAAGCAGAGGAAAGCTTGCTTCCACCTTCTTCTT
ATCGATTTCCTTCTTCCTCTTTTTCTAGTGATCCGTTTGTCTCCCAAGGAACAATAGCCTCTTTCGGACAGGAGGCTGTC
AAAGCGACTGAGACAGCTGCTTTAAGACCGCCTCTTTGTGAATATACGCTGCCTCAGGAAGCAAAAAATGAACTTTTTTC
CCTTGAAAAAAGAACGCCTGCCAATGTAAGTGTGCGTGCCATTCTCCTTTCTAGTGTGGATGCTGTTTGTAGACTAGACG
CTCAAAGCGATCCTATCCCTGTAAAATTACGCCTCTTAGATGATGCTCATTTACCCGGAGGAATGAAAGTAAAGTTGAAA
GGATGTCTGATTGGAGCGAGCGCTTACGGAGATATTTCCAGTGAACGTGTCTATATGCGATTAGAAAACTTAACGCAAGT
CAATCTCAGCGGGCAAGCCATTGAAACGGAAGTGACCGGTTATGTGTCAGGAGAAGATGGAAGATTTGGAATGCGAGGGA
TCTTGGTGGATCGCTCCGCTAAAATATTAAAACCAGCCCTTGGCAGTGGGATCTTATCTGGAATTGCTCAAACGCTTCAG
TCGGCATGCGCTCGCCCATCCAAAGAAACGATTAATACCTACTCGCTCAGCTCGGATTTTGCTCAAAATACGGTGGCTAA
AACTTCAGATGCCTTTAGCCTTTTGGCTTCTTACTATATTAAACGAGCAGAACAAGTCCAACCTGTCCTTCAAATTGATG
CAGGTCGCTTAGTCGATGTCACGTTTACGCAAGGATTTAGCATGGGAGATCTCCATGCTAAGGAAAATTTAAAACAGATT
CGCAATAAACACAGGCCTTCCTCATGA

Upstream 100 bases:

>100_bases
TGTATTCTTGCGGTGAAAAACCATGCCTGATCTTTCGGAAAAAGTACTGAAAAAGCAAAAAATCCACTTAATTCTTGTTG
CAGCTGTGATAGGTTTTGCC

Downstream 100 bases:

>100_bases
AAAAATGGAAATGGAACATTTTTCTTTTAACCTTGGGTTTGCCCATGTGGGGGTTCAGCTTAGACAAGCTCGCTGAAAAA
TATCTGATTGAATTTGGAGA

Product: putative F pilus assembly protein traB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 408

Protein sequence:

>408_residues
MFGLIKYAYDHYEPTSYDLFEPRIDLPVDEFQSKEVWMDRLETQVGFLIQKQKYYEETLLEYKERERANEKEKIELKQYL
TLLKKKMEASQVREEELKNKKDTSALEIASSSKNTFDRPVFEQAEESLLPPSSYRFPSSSFSSDPFVSQGTIASFGQEAV
KATETAALRPPLCEYTLPQEAKNELFSLEKRTPANVSVRAILLSSVDAVCRLDAQSDPIPVKLRLLDDAHLPGGMKVKLK
GCLIGASAYGDISSERVYMRLENLTQVNLSGQAIETEVTGYVSGEDGRFGMRGILVDRSAKILKPALGSGILSGIAQTLQ
SACARPSKETINTYSLSSDFAQNTVAKTSDAFSLLASYYIKRAEQVQPVLQIDAGRLVDVTFTQGFSMGDLHAKENLKQI
RNKHRPSS

Sequences:

>Translated_408_residues
MFGLIKYAYDHYEPTSYDLFEPRIDLPVDEFQSKEVWMDRLETQVGFLIQKQKYYEETLLEYKERERANEKEKIELKQYL
TLLKKKMEASQVREEELKNKKDTSALEIASSSKNTFDRPVFEQAEESLLPPSSYRFPSSSFSSDPFVSQGTIASFGQEAV
KATETAALRPPLCEYTLPQEAKNELFSLEKRTPANVSVRAILLSSVDAVCRLDAQSDPIPVKLRLLDDAHLPGGMKVKLK
GCLIGASAYGDISSERVYMRLENLTQVNLSGQAIETEVTGYVSGEDGRFGMRGILVDRSAKILKPALGSGILSGIAQTLQ
SACARPSKETINTYSLSSDFAQNTVAKTSDAFSLLASYYIKRAEQVQPVLQIDAGRLVDVTFTQGFSMGDLHAKENLKQI
RNKHRPSS
>Mature_408_residues
MFGLIKYAYDHYEPTSYDLFEPRIDLPVDEFQSKEVWMDRLETQVGFLIQKQKYYEETLLEYKERERANEKEKIELKQYL
TLLKKKMEASQVREEELKNKKDTSALEIASSSKNTFDRPVFEQAEESLLPPSSYRFPSSSFSSDPFVSQGTIASFGQEAV
KATETAALRPPLCEYTLPQEAKNELFSLEKRTPANVSVRAILLSSVDAVCRLDAQSDPIPVKLRLLDDAHLPGGMKVKLK
GCLIGASAYGDISSERVYMRLENLTQVNLSGQAIETEVTGYVSGEDGRFGMRGILVDRSAKILKPALGSGILSGIAQTLQ
SACARPSKETINTYSLSSDFAQNTVAKTSDAFSLLASYYIKRAEQVQPVLQIDAGRLVDVTFTQGFSMGDLHAKENLKQI
RNKHRPSS

Specific function: Involved in F pilus assembly [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the traB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005498 [H]

Pfam domain/function: PF03743 TrbI [H]

EC number: NA

Molecular weight: Translated: 45633; Mature: 45633

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGLIKYAYDHYEPTSYDLFEPRIDLPVDEFQSKEVWMDRLETQVGFLIQKQKYYEETLL
CCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EYKERERANEKEKIELKQYLTLLKKKMEASQVREEELKNKKDTSALEIASSSKNTFDRPV
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEECCCCCCCCCCHH
FEQAEESLLPPSSYRFPSSSFSSDPFVSQGTIASFGQEAVKATETAALRPPLCEYTLPQE
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
AKNELFSLEKRTPANVSVRAILLSSVDAVCRLDAQSDPIPVKLRLLDDAHLPGGMKVKLK
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHEECCCCCCCCEEEEEEECCCCCCCCEEEEE
GCLIGASAYGDISSERVYMRLENLTQVNLSGQAIETEVTGYVSGEDGRFGMRGILVDRSA
EEEEECCCCCCCCCCEEEEEECCCEEECCCCCEEEEEEEEEEECCCCCCCCEEEEECCCH
KILKPALGSGILSGIAQTLQSACARPSKETINTYSLSSDFAQNTVAKTSDAFSLLASYYI
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHH
KRAEQVQPVLQIDAGRLVDVTFTQGFSMGDLHAKENLKQIRNKHRPSS
HHHHHHCHHHEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MFGLIKYAYDHYEPTSYDLFEPRIDLPVDEFQSKEVWMDRLETQVGFLIQKQKYYEETLL
CCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EYKERERANEKEKIELKQYLTLLKKKMEASQVREEELKNKKDTSALEIASSSKNTFDRPV
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEECCCCCCCCCCHH
FEQAEESLLPPSSYRFPSSSFSSDPFVSQGTIASFGQEAVKATETAALRPPLCEYTLPQE
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
AKNELFSLEKRTPANVSVRAILLSSVDAVCRLDAQSDPIPVKLRLLDDAHLPGGMKVKLK
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHEECCCCCCCCEEEEEEECCCCCCCCEEEEE
GCLIGASAYGDISSERVYMRLENLTQVNLSGQAIETEVTGYVSGEDGRFGMRGILVDRSA
EEEEECCCCCCCCCCEEEEEECCCEEECCCCCEEEEEEEEEEECCCCCCCCEEEEECCCH
KILKPALGSGILSGIAQTLQSACARPSKETINTYSLSSDFAQNTVAKTSDAFSLLASYYI
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHH
KRAEQVQPVLQIDAGRLVDVTFTQGFSMGDLHAKENLKQIRNKHRPSS
HHHHHHCHHHEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7915817; 8655498 [H]