Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46447049

Identifier: 46447049

GI number: 46447049

Start: 1689469

End: 1690965

Strand: Direct

Name: 46447049

Synonym: pc1415

Alternate gene names: NA

Gene position: 1689469-1690965 (Clockwise)

Preceding gene: 46447046

Following gene: 46447050

Centisome position: 69.97

GC content: 33.53

Gene sequence:

>1497_bases
ATGCAACAAAACAGCGTGAAAAGCTTTGATAATTTTAATGTGAAAAGTCTTGATAGTTGGCTAAACACCATAGAGCAATT
ACCTTTAAATGACAAAAAATTACTGCCTGAATTAAGAGCTATCTTAAAAATTTTTGATGATTGGTTAAATGATAAAAATG
TAATTCAGTTAACACGAATTTTAAAAAAACATGGTTTAGAGCATAAAAATTCTAAGCTTGATGAAGTGATAAAAGAAATT
AGAGATAAAATATTTAATTACACAACTCCAAAGGGTAGGGGCCTAATACACGAATGCGCATATGCTGGAAATGTTGAAAC
GATCCAAGCACTTACTAATTTAGTTTCTACTAATTCGATTAATAATTTACTTGAATCAAAGAGCAAATCAGGTGAGACTG
CTCTTGGTTATGCTAAACGTAAAGGACATCAAGGCGTAATTGCTTACTTGAAGTTGCCTGAGGCTTTACTTAAGAAAGAA
ATTGTTTGTAAAAAAGGCGCAGATCCCAAACTTGAAGGGTTGCTTTTAAGTATGCAAGCATTAAATTTAAGTATTGAGCA
TAGCTTTGCTTATAAAAATGTTACTTATCACTTTACAAACTGTTTCCTTTTGGAAGAATCCGTATTTGGAAAAAGACCTC
TTATTTTTGCTTTTATAGAAAAATCAGAAAAGATTTATCCCCGTTTATTTTGGCTTAGCCAATCACAATCTATGTGGAGG
AGAACTGATAAAATATTTAAAGATTGGATCGGAAAATCGAATAAGGGTGAAGAATGGCTAGCTCTTCCTATTTTAATCAA
TCTAAAAATTTTTAAAATTTTACAAAAAGGTTTTGCTCCGATTTCAAACAAAACGTATGTAGAAGAATTTCTCAAGAGAG
TTGTGGCATGGAGTGATAAAGGTGTTCAACAACCTGGCTGGTTCTTAAATCCAGCAGGATTTCTTACCAATGGAAATGAG
AAAACCGCTGAAGGAGCTGAAAGTACAGATGATACATCTTCAAGTAGTGCTGACGTTCCAAAAATGCCAGAAACCCATAG
AGGCAATATTCTTTTAGGCCCTGAGCATTTACCAGAAGATCCCCATTTAAATGATTTTATAAACAAACAACAAAGGCCTG
ATTTTTCTAAGAGCGTAGAATCGCAAATTATAGATAGCCGCCTTTATGGCCGTTTAAAAGCTAATGTTTTTTTATCATGT
GATAGAGCAATTCGGTTTTTATTCCTACAAAATCATTTAAACCATGTATTTCTAGCGGGAGCCGAGTTAGTGGAAGAGAA
TGTTACAATACGAGGACTTAAAAAAAACTGGGTACAGCTAGGCTCTTTATCGCTTCCACTTCTAGAATATCGTGATCAAT
TTCATGACAAATTTATAAGTGATTCAGAGTGGGATAAAATTTCACAAGGAAAACAGTTGACTTATGTCCAAACATGGAAT
TACTTGAGAGAGATGCCGTGCATTCAAGAATATTATAGCATTCCTCCAAAGATATAG

Upstream 100 bases:

>100_bases
GTTATTTTTTAATGTCCTATTAATTGTTAAAATTGTCAATAAAGTGATTCTTATATTGAGATAAGAAGTTGAAAAATATA
AAAATAAATTTAGGAAATTT

Downstream 100 bases:

>100_bases
CATGCAGTCCTCTTAGTATATTCAAAAAAGAAACTTTTTGTTTAAATTAGCTACCGCAATTTTGCTTTAATTGCGGTTGG
CTTGTCTCTTGCAAGTAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 498; Mature: 498

Protein sequence:

>498_residues
MQQNSVKSFDNFNVKSLDSWLNTIEQLPLNDKKLLPELRAILKIFDDWLNDKNVIQLTRILKKHGLEHKNSKLDEVIKEI
RDKIFNYTTPKGRGLIHECAYAGNVETIQALTNLVSTNSINNLLESKSKSGETALGYAKRKGHQGVIAYLKLPEALLKKE
IVCKKGADPKLEGLLLSMQALNLSIEHSFAYKNVTYHFTNCFLLEESVFGKRPLIFAFIEKSEKIYPRLFWLSQSQSMWR
RTDKIFKDWIGKSNKGEEWLALPILINLKIFKILQKGFAPISNKTYVEEFLKRVVAWSDKGVQQPGWFLNPAGFLTNGNE
KTAEGAESTDDTSSSSADVPKMPETHRGNILLGPEHLPEDPHLNDFINKQQRPDFSKSVESQIIDSRLYGRLKANVFLSC
DRAIRFLFLQNHLNHVFLAGAELVEENVTIRGLKKNWVQLGSLSLPLLEYRDQFHDKFISDSEWDKISQGKQLTYVQTWN
YLREMPCIQEYYSIPPKI

Sequences:

>Translated_498_residues
MQQNSVKSFDNFNVKSLDSWLNTIEQLPLNDKKLLPELRAILKIFDDWLNDKNVIQLTRILKKHGLEHKNSKLDEVIKEI
RDKIFNYTTPKGRGLIHECAYAGNVETIQALTNLVSTNSINNLLESKSKSGETALGYAKRKGHQGVIAYLKLPEALLKKE
IVCKKGADPKLEGLLLSMQALNLSIEHSFAYKNVTYHFTNCFLLEESVFGKRPLIFAFIEKSEKIYPRLFWLSQSQSMWR
RTDKIFKDWIGKSNKGEEWLALPILINLKIFKILQKGFAPISNKTYVEEFLKRVVAWSDKGVQQPGWFLNPAGFLTNGNE
KTAEGAESTDDTSSSSADVPKMPETHRGNILLGPEHLPEDPHLNDFINKQQRPDFSKSVESQIIDSRLYGRLKANVFLSC
DRAIRFLFLQNHLNHVFLAGAELVEENVTIRGLKKNWVQLGSLSLPLLEYRDQFHDKFISDSEWDKISQGKQLTYVQTWN
YLREMPCIQEYYSIPPKI
>Mature_498_residues
MQQNSVKSFDNFNVKSLDSWLNTIEQLPLNDKKLLPELRAILKIFDDWLNDKNVIQLTRILKKHGLEHKNSKLDEVIKEI
RDKIFNYTTPKGRGLIHECAYAGNVETIQALTNLVSTNSINNLLESKSKSGETALGYAKRKGHQGVIAYLKLPEALLKKE
IVCKKGADPKLEGLLLSMQALNLSIEHSFAYKNVTYHFTNCFLLEESVFGKRPLIFAFIEKSEKIYPRLFWLSQSQSMWR
RTDKIFKDWIGKSNKGEEWLALPILINLKIFKILQKGFAPISNKTYVEEFLKRVVAWSDKGVQQPGWFLNPAGFLTNGNE
KTAEGAESTDDTSSSSADVPKMPETHRGNILLGPEHLPEDPHLNDFINKQQRPDFSKSVESQIIDSRLYGRLKANVFLSC
DRAIRFLFLQNHLNHVFLAGAELVEENVTIRGLKKNWVQLGSLSLPLLEYRDQFHDKFISDSEWDKISQGKQLTYVQTWN
YLREMPCIQEYYSIPPKI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57278; Mature: 57278

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQNSVKSFDNFNVKSLDSWLNTIEQLPLNDKKLLPELRAILKIFDDWLNDKNVIQLTRI
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LKKHGLEHKNSKLDEVIKEIRDKIFNYTTPKGRGLIHECAYAGNVETIQALTNLVSTNSI
HHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHH
NNLLESKSKSGETALGYAKRKGHQGVIAYLKLPEALLKKEIVCKKGADPKLEGLLLSMQA
HHHHHHCCCCCCHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHCCCCCCCHHHHHHHHHH
LNLSIEHSFAYKNVTYHFTNCFLLEESVFGKRPLIFAFIEKSEKIYPRLFWLSQSQSMWR
HCEEEECCCCCCCEEEEEEEEEEEEHHHCCCCCEEEEEECCCCCCCCEEEEECCCHHHHH
RTDKIFKDWIGKSNKGEEWLALPILINLKIFKILQKGFAPISNKTYVEEFLKRVVAWSDK
HHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCC
GVQQPGWFLNPAGFLTNGNEKTAEGAESTDDTSSSSADVPKMPETHRGNILLGPEHLPED
CCCCCCCEECCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECHHCCCCC
PHLNDFINKQQRPDFSKSVESQIIDSRLYGRLKANVFLSCDRAIRFLFLQNHLNHVFLAG
CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHEEHHH
AELVEENVTIRGLKKNWVQLGSLSLPLLEYRDQFHDKFISDSEWDKISQGKQLTYVQTWN
HHHHHCCCEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCEEEEHHHHH
YLREMPCIQEYYSIPPKI
HHHHCHHHHHHHCCCCCC
>Mature Secondary Structure
MQQNSVKSFDNFNVKSLDSWLNTIEQLPLNDKKLLPELRAILKIFDDWLNDKNVIQLTRI
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LKKHGLEHKNSKLDEVIKEIRDKIFNYTTPKGRGLIHECAYAGNVETIQALTNLVSTNSI
HHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHH
NNLLESKSKSGETALGYAKRKGHQGVIAYLKLPEALLKKEIVCKKGADPKLEGLLLSMQA
HHHHHHCCCCCCHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHCCCCCCCHHHHHHHHHH
LNLSIEHSFAYKNVTYHFTNCFLLEESVFGKRPLIFAFIEKSEKIYPRLFWLSQSQSMWR
HCEEEECCCCCCCEEEEEEEEEEEEHHHCCCCCEEEEEECCCCCCCCEEEEECCCHHHHH
RTDKIFKDWIGKSNKGEEWLALPILINLKIFKILQKGFAPISNKTYVEEFLKRVVAWSDK
HHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCC
GVQQPGWFLNPAGFLTNGNEKTAEGAESTDDTSSSSADVPKMPETHRGNILLGPEHLPED
CCCCCCCEECCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECHHCCCCC
PHLNDFINKQQRPDFSKSVESQIIDSRLYGRLKANVFLSCDRAIRFLFLQNHLNHVFLAG
CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHEEHHH
AELVEENVTIRGLKKNWVQLGSLSLPLLEYRDQFHDKFISDSEWDKISQGKQLTYVQTWN
HHHHHCCCEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCEEEEHHHHH
YLREMPCIQEYYSIPPKI
HHHHCHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA