Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46447036

Identifier: 46447036

GI number: 46447036

Start: 1679924

End: 1680400

Strand: Direct

Name: 46447036

Synonym: pc1402

Alternate gene names: NA

Gene position: 1679924-1680400 (Clockwise)

Preceding gene: 46447035

Following gene: 46447040

Centisome position: 69.58

GC content: 44.03

Gene sequence:

>477_bases
ATGCTTAAATGTGCTACTCTTCTACGCTCATCAATGGAGCATCTTATGGAAGCAAACAGAAGACATGATAGATCCGACAG
AGTTTGGAATTTACTGGAACCTCATTTGCCAGGAAAAAGAGGGGCTTGGGGTGGTATAGCAAGAGATAATAGGATTTTTA
TCAATGCAGTATTTTGGATATTAAGAACGAAAGCTCCATGGAGGGATTTGCCTCCAGATTACGGTGGTTGGAGCAATACT
CATCGGCGATTTATCCGATGGCGCAATCAGAGAGTCTGGGAAAGGTTGCTTGAGGTGCTGATTGACGATCCAGATTATGA
ATGGCTTGTAATAGATGCTTCGCATTGTAAAGTGCATCCTCATGCAACGGGAGCTAAAGGAGGTAATCAAAGCATGGGTC
GTACAAAAGGGGGCTCAATACAAAATTGCATCTTGCCGTGGATGCGCATGGTCTGCCGATCAGGGTCATTATTATAG

Upstream 100 bases:

>100_bases
TCTTTGCATAACGGGTCGCTATTCCTCTCCAGCGCTTCAAATGTAAAAATGCATTTTCCACCAAATGCCTTAGATAGTGT
AGTCAAGAGAAATAAAATAA

Downstream 100 bases:

>100_bases
AAGGCACAACAGCAGATTGTACTCAAGCAAGCAATTTGATCGCTGGTCTTACAGCTGAGCGATTAATGGCAGACAAAGGA
TATGATAGCGACGTAATCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MLKCATLLRSSMEHLMEANRRHDRSDRVWNLLEPHLPGKRGAWGGIARDNRIFINAVFWILRTKAPWRDLPPDYGGWSNT
HRRFIRWRNQRVWERLLEVLIDDPDYEWLVIDASHCKVHPHATGAKGGNQSMGRTKGGSIQNCILPWMRMVCRSGSLL

Sequences:

>Translated_158_residues
MLKCATLLRSSMEHLMEANRRHDRSDRVWNLLEPHLPGKRGAWGGIARDNRIFINAVFWILRTKAPWRDLPPDYGGWSNT
HRRFIRWRNQRVWERLLEVLIDDPDYEWLVIDASHCKVHPHATGAKGGNQSMGRTKGGSIQNCILPWMRMVCRSGSLL
>Mature_158_residues
MLKCATLLRSSMEHLMEANRRHDRSDRVWNLLEPHLPGKRGAWGGIARDNRIFINAVFWILRTKAPWRDLPPDYGGWSNT
HRRFIRWRNQRVWERLLEVLIDDPDYEWLVIDASHCKVHPHATGAKGGNQSMGRTKGGSIQNCILPWMRMVCRSGSLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To transposase of insertion sequence IS6501 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18437; Mature: 18437

Theoretical pI: Translated: 10.80; Mature: 10.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKCATLLRSSMEHLMEANRRHDRSDRVWNLLEPHLPGKRGAWGGIARDNRIFINAVFWI
CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH
LRTKAPWRDLPPDYGGWSNTHRRFIRWRNQRVWERLLEVLIDDPDYEWLVIDASHCKVHP
HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEECC
HATGAKGGNQSMGRTKGGSIQNCILPWMRMVCRSGSLL
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLKCATLLRSSMEHLMEANRRHDRSDRVWNLLEPHLPGKRGAWGGIARDNRIFINAVFWI
CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH
LRTKAPWRDLPPDYGGWSNTHRRFIRWRNQRVWERLLEVLIDDPDYEWLVIDASHCKVHP
HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEECC
HATGAKGGNQSMGRTKGGSIQNCILPWMRMVCRSGSLL
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424; 8190622 [H]