| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46447015
Identifier: 46447015
GI number: 46447015
Start: 1657029
End: 1658273
Strand: Direct
Name: 46447015
Synonym: pc1381
Alternate gene names: NA
Gene position: 1657029-1658273 (Clockwise)
Preceding gene: 46447014
Following gene: 46447016
Centisome position: 68.63
GC content: 36.95
Gene sequence:
>1245_bases GTGTGTATGGAAGTGGCCATTATAGGACTAGGCGCCGCCTCTGTCAGCCTCACAGAGTATTATAGTATCAATGTCTTACA AAAGTATACAGATTTGATCACCCCTCTAAAAACGATATTTTCAAAAGACTCTTCCGAATTAACGGCTGAAGATTATGATT TAATTTTAAAGCAAGTGGATAGTCTGAAACAGTTAGCAAAAGAGGGTGTCCAAGACACAAACGGAACTGATACTTATCAA AGTTTTATGAATCAGGCCATGGTCACACCATTAAATGATATTATGAAAACTTTATCGATAGTAGGAATTCCTCCAGATCC CAATGCTGGACCCTTAAGTGATTCAGCAAAAATAGCCACTCTCATGGGTTGGAAATCCTTACCTAATTTCCAAATTGATG TTCTAGGACCACTGAATGCAGCATTGTCGATACAATTAGAAGCTTATCAATATACTGTCAATATTGAAAATCCGGGGACA GGAATTATTTCGACCTTAACAGTATTAGCCTCGCCAGGACGTTCTCTGCAAAGTATGCTTGAATTAGAGTATATAGGCGC AGGTAATACTCAAATGGCTGGTAAAATGGCTGATTTGGAGCAAGCTTTAAGTTTGTCTCAACAGATTTTAACGACTTTAA CAGGAATTCAAAATATCTCTAACCAAATTCAAGTTTACAATAAAATTCCTTTCAGATTACCCAATACTGCCGATTTAGAT GACTATAAAAAACAATATAAAAAACAAGCAAGTGCCTATTTTGCTCAAATTTTTCCTACTGCTGAACCAGTTGCCGATTC TGCTCAAAAACTTTTAAATCTCAAACAAACCTTATGGGATCAAATGGTAGCTCTTGAAGCTGCGAACCCTACTAGTGGAC GCAATGTGACAGGTTCACTTGCTAATGCAGTTTACAAAGTTGTTCAAGATATTAGCGCAGCTTTTGTCGGGGTTGATTTA ACTGCTGCCAATGCCCAGGATCAACTATTTGCTTCTGTAAAAAAATGGATCATGGATAACCAAGATGTTCGTATTGACGA TGCAGGAAGCAATAAAAATGCAGGTGCAATTCAAGATCGACTTGCCTCTGCAATGACAACCGCTCAAAATTTAGAAGAGA GCCAAAGAGAAGATGTTCGCCGTTATTTACTACTCTTCCAAGAATTTTATAAATCTGCCATGAGTATGATTCAATTATTG GGAACTATTTTTGACAAAATTAATAAAGGAATATTTAAAGAGTAA
Upstream 100 bases:
>100_bases GAAAATCTATAGATATCATTGTCTAATAAATGGAGATGTAATAAATAAAATAATTTGTTGACAATGCATAAAACAAAGCA TAAATCATAATGTAAGGAGG
Downstream 100 bases:
>100_bases TTATTTGTTTAATTAAATAATTAATAATATAATAAAATTATAGAAATTTTTAATTATTTACTTACATGTTAATAAGTAAG TAATTTAAGGAGTTTGAATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 414; Mature: 414
Protein sequence:
>414_residues MCMEVAIIGLGAASVSLTEYYSINVLQKYTDLITPLKTIFSKDSSELTAEDYDLILKQVDSLKQLAKEGVQDTNGTDTYQ SFMNQAMVTPLNDIMKTLSIVGIPPDPNAGPLSDSAKIATLMGWKSLPNFQIDVLGPLNAALSIQLEAYQYTVNIENPGT GIISTLTVLASPGRSLQSMLELEYIGAGNTQMAGKMADLEQALSLSQQILTTLTGIQNISNQIQVYNKIPFRLPNTADLD DYKKQYKKQASAYFAQIFPTAEPVADSAQKLLNLKQTLWDQMVALEAANPTSGRNVTGSLANAVYKVVQDISAAFVGVDL TAANAQDQLFASVKKWIMDNQDVRIDDAGSNKNAGAIQDRLASAMTTAQNLEESQREDVRRYLLLFQEFYKSAMSMIQLL GTIFDKINKGIFKE
Sequences:
>Translated_414_residues MCMEVAIIGLGAASVSLTEYYSINVLQKYTDLITPLKTIFSKDSSELTAEDYDLILKQVDSLKQLAKEGVQDTNGTDTYQ SFMNQAMVTPLNDIMKTLSIVGIPPDPNAGPLSDSAKIATLMGWKSLPNFQIDVLGPLNAALSIQLEAYQYTVNIENPGT GIISTLTVLASPGRSLQSMLELEYIGAGNTQMAGKMADLEQALSLSQQILTTLTGIQNISNQIQVYNKIPFRLPNTADLD DYKKQYKKQASAYFAQIFPTAEPVADSAQKLLNLKQTLWDQMVALEAANPTSGRNVTGSLANAVYKVVQDISAAFVGVDL TAANAQDQLFASVKKWIMDNQDVRIDDAGSNKNAGAIQDRLASAMTTAQNLEESQREDVRRYLLLFQEFYKSAMSMIQLL GTIFDKINKGIFKE >Mature_414_residues MCMEVAIIGLGAASVSLTEYYSINVLQKYTDLITPLKTIFSKDSSELTAEDYDLILKQVDSLKQLAKEGVQDTNGTDTYQ SFMNQAMVTPLNDIMKTLSIVGIPPDPNAGPLSDSAKIATLMGWKSLPNFQIDVLGPLNAALSIQLEAYQYTVNIENPGT GIISTLTVLASPGRSLQSMLELEYIGAGNTQMAGKMADLEQALSLSQQILTTLTGIQNISNQIQVYNKIPFRLPNTADLD DYKKQYKKQASAYFAQIFPTAEPVADSAQKLLNLKQTLWDQMVALEAANPTSGRNVTGSLANAVYKVVQDISAAFVGVDL TAANAQDQLFASVKKWIMDNQDVRIDDAGSNKNAGAIQDRLASAMTTAQNLEESQREDVRRYLLLFQEFYKSAMSMIQLL GTIFDKINKGIFKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45334; Mature: 45334
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCMEVAIIGLGAASVSLTEYYSINVLQKYTDLITPLKTIFSKDSSELTAEDYDLILKQVD CCEEEEEEECCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH SLKQLAKEGVQDTNGTDTYQSFMNQAMVTPLNDIMKTLSIVGIPPDPNAGPLSDSAKIAT HHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHEECCCCCCCCCCCCCCCHHHH LMGWKSLPNFQIDVLGPLNAALSIQLEAYQYTVNIENPGTGIISTLTVLASPGRSLQSML HHHHCCCCCCEEEEECCCCCEEEEEEEEEEEEEEECCCCCHHHHHHHHHHCCCHHHHHHH ELEYIGAGNTQMAGKMADLEQALSLSQQILTTLTGIQNISNQIQVYNKIPFRLPNTADLD HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH DYKKQYKKQASAYFAQIFPTAEPVADSAQKLLNLKQTLWDQMVALEAANPTSGRNVTGSL HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH ANAVYKVVQDISAAFVGVDLTAANAQDQLFASVKKWIMDNQDVRIDDAGSNKNAGAIQDR HHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHH LASAMTTAQNLEESQREDVRRYLLLFQEFYKSAMSMIQLLGTIFDKINKGIFKE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MCMEVAIIGLGAASVSLTEYYSINVLQKYTDLITPLKTIFSKDSSELTAEDYDLILKQVD CCEEEEEEECCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH SLKQLAKEGVQDTNGTDTYQSFMNQAMVTPLNDIMKTLSIVGIPPDPNAGPLSDSAKIAT HHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHEECCCCCCCCCCCCCCCHHHH LMGWKSLPNFQIDVLGPLNAALSIQLEAYQYTVNIENPGTGIISTLTVLASPGRSLQSML HHHHCCCCCCEEEEECCCCCEEEEEEEEEEEEEEECCCCCHHHHHHHHHHCCCHHHHHHH ELEYIGAGNTQMAGKMADLEQALSLSQQILTTLTGIQNISNQIQVYNKIPFRLPNTADLD HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH DYKKQYKKQASAYFAQIFPTAEPVADSAQKLLNLKQTLWDQMVALEAANPTSGRNVTGSL HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH ANAVYKVVQDISAAFVGVDLTAANAQDQLFASVKKWIMDNQDVRIDDAGSNKNAGAIQDR HHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHH LASAMTTAQNLEESQREDVRRYLLLFQEFYKSAMSMIQLLGTIFDKINKGIFKE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA