Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446992

Identifier: 46446992

GI number: 46446992

Start: 1621290

End: 1621724

Strand: Direct

Name: 46446992

Synonym: pc1358

Alternate gene names: NA

Gene position: 1621290-1621724 (Clockwise)

Preceding gene: 46446988

Following gene: 46446993

Centisome position: 67.15

GC content: 31.72

Gene sequence:

>435_bases
ATGAAAGATAAAAATCCAATAGAACCCTTGCTTTCGCAAATTACAGAGATTCTGCATAAAATTCAAAATCATGATGGCTC
CATTTCCAATAATTTAACACCTCAAATTATAGAGGAAATTGAAAGACTAGAAAATGCAATTGCTCTTTTTAATGATGTAA
ATCAAAAGACTTTTCAAGATGCGAATATTGACGTTGAAAACTTAAAAATAGATTCTAGCCGCTCTCAAATGATTAGTGAT
AAAGATAAGCGCGTATTAAAGCAAGCGCAAGAAATCGAGAAAGATGCGAAAAAACTACAGTTCGCCTTTTCAAAAATCAT
GGAAAGAGGACAAAAAGTTTCTGTTAAAAAAGAAGATCCGCTTAAACAAAAAATCAAAGAACGGCGTAAACGATTTAAAC
CATTAGGTGGTGATAAAAATTGGATTCCTATGTAA

Upstream 100 bases:

>100_bases
TAAACTCTCTCTATTTCAGAAAATTTAAACTTGGAATCTTTTAATGCTTTCGTTATTTAGAAATAATAGAACAAAAGTAG
AAAATCATGGAGGAAAGAAG

Downstream 100 bases:

>100_bases
TAGCAATTTTGTAATAGCAATTTTGATTGAGAAAATTTGCAAGACATTCGCTTTTCTGTTAAATGATATTTAAATCCCGT
TAAAGGAAAAAGAATGTCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MKDKNPIEPLLSQITEILHKIQNHDGSISNNLTPQIIEEIERLENAIALFNDVNQKTFQDANIDVENLKIDSSRSQMISD
KDKRVLKQAQEIEKDAKKLQFAFSKIMERGQKVSVKKEDPLKQKIKERRKRFKPLGGDKNWIPM

Sequences:

>Translated_144_residues
MKDKNPIEPLLSQITEILHKIQNHDGSISNNLTPQIIEEIERLENAIALFNDVNQKTFQDANIDVENLKIDSSRSQMISD
KDKRVLKQAQEIEKDAKKLQFAFSKIMERGQKVSVKKEDPLKQKIKERRKRFKPLGGDKNWIPM
>Mature_144_residues
MKDKNPIEPLLSQITEILHKIQNHDGSISNNLTPQIIEEIERLENAIALFNDVNQKTFQDANIDVENLKIDSSRSQMISD
KDKRVLKQAQEIEKDAKKLQFAFSKIMERGQKVSVKKEDPLKQKIKERRKRFKPLGGDKNWIPM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16766; Mature: 16766

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDKNPIEPLLSQITEILHKIQNHDGSISNNLTPQIIEEIERLENAIALFNDVNQKTFQD
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
ANIDVENLKIDSSRSQMISDKDKRVLKQAQEIEKDAKKLQFAFSKIMERGQKVSVKKEDP
CCCCHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
LKQKIKERRKRFKPLGGDKNWIPM
HHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MKDKNPIEPLLSQITEILHKIQNHDGSISNNLTPQIIEEIERLENAIALFNDVNQKTFQD
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
ANIDVENLKIDSSRSQMISDKDKRVLKQAQEIEKDAKKLQFAFSKIMERGQKVSVKKEDP
CCCCHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
LKQKIKERRKRFKPLGGDKNWIPM
HHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA