Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446980

Identifier: 46446980

GI number: 46446980

Start: 1606054

End: 1608501

Strand: Direct

Name: 46446980

Synonym: pc1346

Alternate gene names: NA

Gene position: 1606054-1608501 (Clockwise)

Preceding gene: 46446979

Following gene: 46446987

Centisome position: 66.52

GC content: 35.46

Gene sequence:

>2448_bases
ATGCAACCTGAAGATGTAAGTAATAGCCATCACGTATCGTCTTTGTCATTAGGTGCATTTTCCTACACCTCCCTCATCGA
TGAGCCTGGTTTCGAGGAAATATCTCCGCATAGAAACCTTGAAAATATACTTAGCACCGTACCAGATTATGATGAAGCAG
AATATTTGCACCCCTTAATATTTCGCATAGCAGCAGAACATTTACCATTAATTCCAAAAGATTTTTCTCCAGAAGAAGCT
TATGAGTTATTAGAAAAATTATTTATAGATGTGAATTCACAAAATCTAGGAATAGAATTAAATTTCAATGATTTAAAAGA
AATCCTTCTCAAGAATCCAATAGATAATGACTCATTTGAGGCAGAAATTGTGTCAACTTATGAGACCTTATTTGAACTAG
CTGAAATTCAAATTCAAACAAACTATTTTTTGTCTTCATATGCACTTACTCCAGAATCATCCCAAAGTATCCTTGGCCAG
GTCTTTACTGAAGCCACAATTGGCATAGAAAAAAGCAGAAAAACTACAAATAATGAAAAACTAATCCTTAACCATATGGG
AGCCGATCCCCAAAAAAACGACTATCAAGCAAAACTAGACATTTTAGCTCAATATTATGAGAAGAATCCAAAACAAGCTG
TCAAGCAATTAAAAAAACAAATAAAACCGCTTATTAAGCTAAATGCCATGATGAGAGAACACTATTCAGTACCGAATATT
AACCTTTTAGGAAAAGAAACTCTTAATCGTATGTTATTATCTAATCCTGAATTTACAAAATTTTTACAAGATCCAGATTT
AATCAAAGCCATTATTGCAATGGAAGTCATTGAAAGTATGGAAATTACAACCCCTCAAGAGGAAGAAGCACAGAGCATCG
CTAAGGAAAGCAATAAGCTCTATATTGGTTTTTCCACAAAGGTTAGTACCGTGGTGCGCTTTTGCCTGCAATCACATCCA
AATTCTTTATACCTGATTGTCCCCAACGGTAAAAAACTTGATCCTAATTATCTCAAAAAAGATAAAATTACGAGGACGAA
TTTATTAAAGATGACACAAGCTGTATATAAAACAACTCCAAAGAACGTTTCTTCTTCTAATCATCTTCTGAAAGCTAGTT
GCTTTGATGCAGGTTACCAACCAAAGAATTGGGATAACCAACTTTTTATAGAATTTTCTTCATTTTGCACCAATCTAAAA
CAAAAAACTTCTGTTGAATTGAAGAAATTCGCAGAAACAAGAAAAGATTTAAGTGGATGGGTTGAAAGACAAGGTCCTGA
AGAGTGTAAAGCAGGGATGAAGCTGCTATTTGAGCAATCTGGTATCTCAACAGAAATGGAACTAAAAGAGGTTGTTAAAC
GCTTAGCTTATTCTCCTGCATGGCTTCAACCTTTGATTGCTCATTTGTGTTTAGATCGTTTGCATTTTGGTGCTATCATG
ATGCTTGGTGATAACGAAGAAATGCTCATTCAGCTAGCAGATCAAAAGATTAGCTGTGCTGATTTATTTTTGGCTGTCGC
TGACTATTTACACCACGAAGGTGTAAATAAAGGTAACGCCATTGCTGCTGAGGCTCTTTTTTCTCGAATGGCTCTTGTGA
AAGATTATGGAATAGAGGAATTAGGCTGGTATGAGTTTATTCCCACCAAAAGTCCAATTCTTCAAGAAATAGAAGACAAG
TTTGGTCCTATTACAACGAAAAATTATTTTGAAATGATCTTCTCTTTAAATAGTCAACTAAAAGGGCTTATTTCAAAATA
TGGAACGCTGGAGAAAATCGTAGAGGCAAACGATAAAGAACTCGCTAAGCGTTTGACGTTGTTACAAGGGCTACTGGCAT
CCAATCCAAAAGAAATTATCCAAGCAATCCACAAATATCACCAAAATCCCATGTTTCAATATATGGGCCCTTTAAAATTT
ATTTCATTTCTTGCTCAAAGCCATGCAAATCTTCCAGAAGAAAAAAATGTTCATGGACTCACTTCTCGTCAACGCGTTGC
TTTATATGGATACACGACTGGTGATTATGCAATCATTAATCCTGCGATGAGAAAAGCAAAAGAAGGCAAAATAGAGGATC
CTGGGTTAGCAGCTTATGTTTCTGATGCATTGAAAGGGATGTTGAAGCTTCCTGATTATCAATTAGAGGAAGACTCTGTC
CACCTAGAACGATCTATTTTTACGGAACCTCCAGATAACCCTCTTTGGGGACAACAAACATTCATAAAAAACAAAGTTTT
TAAAGATTTTGCTTTTGTCAGTACAACTCCTAAGTCGAACGTGAAAGGTGCGTGGAACTTAACTTACACAAGTACAAAAG
GTGCAAAAGATGTAGGTCGTTATTCTGCATGGCCTGGCGAAAACGAAATACTTATTCTTCCGGGAATTGAGTATATTGTT
GAAAATGTGGATAAAAACAATGTTACTTTAAAACTCAAAGAAGATTAA

Upstream 100 bases:

>100_bases
ACAAATCAAGCTATATCTTTACAAGCTCTAAAGCAGAAATTAGAGAGAAAGATTCAGCAAATGAAAAATAAAAAAATACT
TATATAATTGGGAGAAAAAC

Downstream 100 bases:

>100_bases
ATTGGCATTGCACGGATTTGTGGACTTTACTTTAATTTCTGTCTAAATTCCTACTCCATTTAGGAGCTAAAAGCCTACTT
AAAGCTTAACCGTTGACAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 815; Mature: 815

Protein sequence:

>815_residues
MQPEDVSNSHHVSSLSLGAFSYTSLIDEPGFEEISPHRNLENILSTVPDYDEAEYLHPLIFRIAAEHLPLIPKDFSPEEA
YELLEKLFIDVNSQNLGIELNFNDLKEILLKNPIDNDSFEAEIVSTYETLFELAEIQIQTNYFLSSYALTPESSQSILGQ
VFTEATIGIEKSRKTTNNEKLILNHMGADPQKNDYQAKLDILAQYYEKNPKQAVKQLKKQIKPLIKLNAMMREHYSVPNI
NLLGKETLNRMLLSNPEFTKFLQDPDLIKAIIAMEVIESMEITTPQEEEAQSIAKESNKLYIGFSTKVSTVVRFCLQSHP
NSLYLIVPNGKKLDPNYLKKDKITRTNLLKMTQAVYKTTPKNVSSSNHLLKASCFDAGYQPKNWDNQLFIEFSSFCTNLK
QKTSVELKKFAETRKDLSGWVERQGPEECKAGMKLLFEQSGISTEMELKEVVKRLAYSPAWLQPLIAHLCLDRLHFGAIM
MLGDNEEMLIQLADQKISCADLFLAVADYLHHEGVNKGNAIAAEALFSRMALVKDYGIEELGWYEFIPTKSPILQEIEDK
FGPITTKNYFEMIFSLNSQLKGLISKYGTLEKIVEANDKELAKRLTLLQGLLASNPKEIIQAIHKYHQNPMFQYMGPLKF
ISFLAQSHANLPEEKNVHGLTSRQRVALYGYTTGDYAIINPAMRKAKEGKIEDPGLAAYVSDALKGMLKLPDYQLEEDSV
HLERSIFTEPPDNPLWGQQTFIKNKVFKDFAFVSTTPKSNVKGAWNLTYTSTKGAKDVGRYSAWPGENEILILPGIEYIV
ENVDKNNVTLKLKED

Sequences:

>Translated_815_residues
MQPEDVSNSHHVSSLSLGAFSYTSLIDEPGFEEISPHRNLENILSTVPDYDEAEYLHPLIFRIAAEHLPLIPKDFSPEEA
YELLEKLFIDVNSQNLGIELNFNDLKEILLKNPIDNDSFEAEIVSTYETLFELAEIQIQTNYFLSSYALTPESSQSILGQ
VFTEATIGIEKSRKTTNNEKLILNHMGADPQKNDYQAKLDILAQYYEKNPKQAVKQLKKQIKPLIKLNAMMREHYSVPNI
NLLGKETLNRMLLSNPEFTKFLQDPDLIKAIIAMEVIESMEITTPQEEEAQSIAKESNKLYIGFSTKVSTVVRFCLQSHP
NSLYLIVPNGKKLDPNYLKKDKITRTNLLKMTQAVYKTTPKNVSSSNHLLKASCFDAGYQPKNWDNQLFIEFSSFCTNLK
QKTSVELKKFAETRKDLSGWVERQGPEECKAGMKLLFEQSGISTEMELKEVVKRLAYSPAWLQPLIAHLCLDRLHFGAIM
MLGDNEEMLIQLADQKISCADLFLAVADYLHHEGVNKGNAIAAEALFSRMALVKDYGIEELGWYEFIPTKSPILQEIEDK
FGPITTKNYFEMIFSLNSQLKGLISKYGTLEKIVEANDKELAKRLTLLQGLLASNPKEIIQAIHKYHQNPMFQYMGPLKF
ISFLAQSHANLPEEKNVHGLTSRQRVALYGYTTGDYAIINPAMRKAKEGKIEDPGLAAYVSDALKGMLKLPDYQLEEDSV
HLERSIFTEPPDNPLWGQQTFIKNKVFKDFAFVSTTPKSNVKGAWNLTYTSTKGAKDVGRYSAWPGENEILILPGIEYIV
ENVDKNNVTLKLKED
>Mature_815_residues
MQPEDVSNSHHVSSLSLGAFSYTSLIDEPGFEEISPHRNLENILSTVPDYDEAEYLHPLIFRIAAEHLPLIPKDFSPEEA
YELLEKLFIDVNSQNLGIELNFNDLKEILLKNPIDNDSFEAEIVSTYETLFELAEIQIQTNYFLSSYALTPESSQSILGQ
VFTEATIGIEKSRKTTNNEKLILNHMGADPQKNDYQAKLDILAQYYEKNPKQAVKQLKKQIKPLIKLNAMMREHYSVPNI
NLLGKETLNRMLLSNPEFTKFLQDPDLIKAIIAMEVIESMEITTPQEEEAQSIAKESNKLYIGFSTKVSTVVRFCLQSHP
NSLYLIVPNGKKLDPNYLKKDKITRTNLLKMTQAVYKTTPKNVSSSNHLLKASCFDAGYQPKNWDNQLFIEFSSFCTNLK
QKTSVELKKFAETRKDLSGWVERQGPEECKAGMKLLFEQSGISTEMELKEVVKRLAYSPAWLQPLIAHLCLDRLHFGAIM
MLGDNEEMLIQLADQKISCADLFLAVADYLHHEGVNKGNAIAAEALFSRMALVKDYGIEELGWYEFIPTKSPILQEIEDK
FGPITTKNYFEMIFSLNSQLKGLISKYGTLEKIVEANDKELAKRLTLLQGLLASNPKEIIQAIHKYHQNPMFQYMGPLKF
ISFLAQSHANLPEEKNVHGLTSRQRVALYGYTTGDYAIINPAMRKAKEGKIEDPGLAAYVSDALKGMLKLPDYQLEEDSV
HLERSIFTEPPDNPLWGQQTFIKNKVFKDFAFVSTTPKSNVKGAWNLTYTSTKGAKDVGRYSAWPGENEILILPGIEYIV
ENVDKNNVTLKLKED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 92495; Mature: 92495

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPEDVSNSHHVSSLSLGAFSYTSLIDEPGFEEISPHRNLENILSTVPDYDEAEYLHPLI
CCCCCCCCCCCCCEEECCHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHH
FRIAAEHLPLIPKDFSPEEAYELLEKLFIDVNSQNLGIELNFNDLKEILLKNPIDNDSFE
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHCCCCCCCCCH
AEIVSTYETLFELAEIQIQTNYFLSSYALTPESSQSILGQVFTEATIGIEKSRKTTNNEK
HHHHHHHHHHHHHHHHEEEEEEEEEHEECCCCCHHHHHHHHHHHHHHCCHHCCCCCCCCE
LILNHMGADPQKNDYQAKLDILAQYYEKNPKQAVKQLKKQIKPLIKLNAMMREHYSVPNI
EEEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
NLLGKETLNRMLLSNPEFTKFLQDPDLIKAIIAMEVIESMEITTPQEEEAQSIAKESNKL
EECCHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEE
YIGFSTKVSTVVRFCLQSHPNSLYLIVPNGKKLDPNYLKKDKITRTNLLKMTQAVYKTTP
EEEECHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCC
KNVSSSNHLLKASCFDAGYQPKNWDNQLFIEFSSFCTNLKQKTSVELKKFAETRKDLSGW
CCCCCCCCEEEEHHHCCCCCCCCCCCEEEEEHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
VERQGPEECKAGMKLLFEQSGISTEMELKEVVKRLAYSPAWLQPLIAHLCLDRLHFGAIM
HHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCEEE
MLGDNEEMLIQLADQKISCADLFLAVADYLHHEGVNKGNAIAAEALFSRMALVKDYGIEE
EECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCC
LGWYEFIPTKSPILQEIEDKFGPITTKNYFEMIFSLNSQLKGLISKYGTLEKIVEANDKE
CCCEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LAKRLTLLQGLLASNPKEIIQAIHKYHQNPMFQYMGPLKFISFLAQSHANLPEEKNVHGL
HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
TSRQRVALYGYTTGDYAIINPAMRKAKEGKIEDPGLAAYVSDALKGMLKLPDYQLEEDSV
CCCCEEEEEEECCCCEEEECHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCH
HLERSIFTEPPDNPLWGQQTFIKNKVFKDFAFVSTTPKSNVKGAWNLTYTSTKGAKDVGR
HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHEECCCCCCCCCEEEEEEECCCCCHHHHC
YSAWPGENEILILPGIEYIVENVDKNNVTLKLKED
CCCCCCCCCEEEECCHHHHHHCCCCCCEEEEEECC
>Mature Secondary Structure
MQPEDVSNSHHVSSLSLGAFSYTSLIDEPGFEEISPHRNLENILSTVPDYDEAEYLHPLI
CCCCCCCCCCCCCEEECCHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHH
FRIAAEHLPLIPKDFSPEEAYELLEKLFIDVNSQNLGIELNFNDLKEILLKNPIDNDSFE
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHCCCCCCCCCH
AEIVSTYETLFELAEIQIQTNYFLSSYALTPESSQSILGQVFTEATIGIEKSRKTTNNEK
HHHHHHHHHHHHHHHHEEEEEEEEEHEECCCCCHHHHHHHHHHHHHHCCHHCCCCCCCCE
LILNHMGADPQKNDYQAKLDILAQYYEKNPKQAVKQLKKQIKPLIKLNAMMREHYSVPNI
EEEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
NLLGKETLNRMLLSNPEFTKFLQDPDLIKAIIAMEVIESMEITTPQEEEAQSIAKESNKL
EECCHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEE
YIGFSTKVSTVVRFCLQSHPNSLYLIVPNGKKLDPNYLKKDKITRTNLLKMTQAVYKTTP
EEEECHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCC
KNVSSSNHLLKASCFDAGYQPKNWDNQLFIEFSSFCTNLKQKTSVELKKFAETRKDLSGW
CCCCCCCCEEEEHHHCCCCCCCCCCCEEEEEHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
VERQGPEECKAGMKLLFEQSGISTEMELKEVVKRLAYSPAWLQPLIAHLCLDRLHFGAIM
HHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCEEE
MLGDNEEMLIQLADQKISCADLFLAVADYLHHEGVNKGNAIAAEALFSRMALVKDYGIEE
EECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCC
LGWYEFIPTKSPILQEIEDKFGPITTKNYFEMIFSLNSQLKGLISKYGTLEKIVEANDKE
CCCEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LAKRLTLLQGLLASNPKEIIQAIHKYHQNPMFQYMGPLKFISFLAQSHANLPEEKNVHGL
HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
TSRQRVALYGYTTGDYAIINPAMRKAKEGKIEDPGLAAYVSDALKGMLKLPDYQLEEDSV
CCCCEEEEEEECCCCEEEECHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCH
HLERSIFTEPPDNPLWGQQTFIKNKVFKDFAFVSTTPKSNVKGAWNLTYTSTKGAKDVGR
HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHEECCCCCCCCCEEEEEEECCCCCHHHHC
YSAWPGENEILILPGIEYIVENVDKNNVTLKLKED
CCCCCCCCCEEEECCHHHHHHCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA