| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446956
Identifier: 46446956
GI number: 46446956
Start: 1578026
End: 1578358
Strand: Direct
Name: 46446956
Synonym: pc1322
Alternate gene names: NA
Gene position: 1578026-1578358 (Clockwise)
Preceding gene: 46446955
Following gene: 46446957
Centisome position: 65.36
GC content: 31.83
Gene sequence:
>333_bases TTGGAGTTTTATATGAGTTTAGAACAAAAAATGGAAGAAAAATTTCACTCAACTCAAGTAAAAATGAAAGAAATTTCCGT AGGCATGGGAAAATTAGAATCGGAATACCAAAAGCTTTTGAAAGATTTGGGGCTTTCTAGTGAAGAAGTTCATGAATTTG CTTCTAATGCATCCAATTATTCCGCTCCTATATGGGAACAACTGCAAAATGAAAAAAAACAATTAGATGAAAAATTAAAT TTAAATCTAAACAACGTAAGAGACCCTTTAAAAGTAAAAAAAGCTTTTTCGGATCACGCCACTATCCAATCTCACTGGAT TTACGTCCGTTAA
Upstream 100 bases:
>100_bases AATTTATTTCTTACACTTAGAGAAAATATACAAAATTGAAATTTTGAAAATTTATTGAAATTAATTCAAACAAATATTAA AATATTAATTGAGTATTTAT
Downstream 100 bases:
>100_bases TTTTCAAAACTTAAATCATAAAATTTGCTAATCTAATATTTATGTGCATATCCATTCAACCATTCAACCTTAGTCATGCA CAAAACAATAAATTTTTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 110; Mature: 110
Protein sequence:
>110_residues MEFYMSLEQKMEEKFHSTQVKMKEISVGMGKLESEYQKLLKDLGLSSEEVHEFASNASNYSAPIWEQLQNEKKQLDEKLN LNLNNVRDPLKVKKAFSDHATIQSHWIYVR
Sequences:
>Translated_110_residues MEFYMSLEQKMEEKFHSTQVKMKEISVGMGKLESEYQKLLKDLGLSSEEVHEFASNASNYSAPIWEQLQNEKKQLDEKLN LNLNNVRDPLKVKKAFSDHATIQSHWIYVR >Mature_110_residues MEFYMSLEQKMEEKFHSTQVKMKEISVGMGKLESEYQKLLKDLGLSSEEVHEFASNASNYSAPIWEQLQNEKKQLDEKLN LNLNNVRDPLKVKKAFSDHATIQSHWIYVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12936; Mature: 12936
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFYMSLEQKMEEKFHSTQVKMKEISVGMGKLESEYQKLLKDLGLSSEEVHEFASNASNY CCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCC SAPIWEQLQNEKKQLDEKLNLNLNNVRDPLKVKKAFSDHATIQSHWIYVR CCHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHCCHHHHCCCEEC >Mature Secondary Structure MEFYMSLEQKMEEKFHSTQVKMKEISVGMGKLESEYQKLLKDLGLSSEEVHEFASNASNY CCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCC SAPIWEQLQNEKKQLDEKLNLNLNNVRDPLKVKKAFSDHATIQSHWIYVR CCHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHCCHHHHCCCEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA