| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446918
Identifier: 46446918
GI number: 46446918
Start: 1540514
End: 1540768
Strand: Direct
Name: 46446918
Synonym: pc1284
Alternate gene names: NA
Gene position: 1540514-1540768 (Clockwise)
Preceding gene: 46446917
Following gene: 46446919
Centisome position: 63.8
GC content: 38.04
Gene sequence:
>255_bases TTGGCATTAATTTACCCCTTTCCCCCTCTAACCAAAAGCAATAAAATCGCATCATCTGAGTATGTTTGTGGTCTACCTAC CAAACCACTACACGATAAAGAAAGCCACTTTTTCCAAAGATGCCTCTTCAAACCAAATAGTTATGTTCTTCTTTTGAATC AATGCTTTGTCAAACTCAGACCAACCCATGCTTTTTTTTATCTTTCCTACTATCCATTTTATTTCAAGCCAATTGCGCAA CATGGCCCCATGTGA
Upstream 100 bases:
>100_bases TGAAGGGTCTTCTCCCTACGAGAAACCTGACTCTAACTAGAAACTAGCCAATCAACTCCTATCACTGAAAATATCGACTT TACAAATCTTTTCAGGCTTC
Downstream 100 bases:
>100_bases AATTGTGAAAATAAATAGTCAATCCTTCGGTTGGTTTGAAATTGCCTTTTCTATATAATTATTTCATTCAATTGCAAAAT TATCAGTTTATATGAAGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 84; Mature: 83
Protein sequence:
>84_residues MALIYPFPPLTKSNKIASSEYVCGLPTKPLHDKESHFFQRCLFKPNSYVLLLNQCFVKLRPTHAFFYLSYYPFYFKPIAQ HGPM
Sequences:
>Translated_84_residues MALIYPFPPLTKSNKIASSEYVCGLPTKPLHDKESHFFQRCLFKPNSYVLLLNQCFVKLRPTHAFFYLSYYPFYFKPIAQ HGPM >Mature_83_residues ALIYPFPPLTKSNKIASSEYVCGLPTKPLHDKESHFFQRCLFKPNSYVLLLNQCFVKLRPTHAFFYLSYYPFYFKPIAQH GPM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9879; Mature: 9748
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALIYPFPPLTKSNKIASSEYVCGLPTKPLHDKESHFFQRCLFKPNSYVLLLNQCFVKLR CEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCEEEEC PTHAFFYLSYYPFYFKPIAQHGPM CCEEEEEEEECCCEEEECHHCCCC >Mature Secondary Structure ALIYPFPPLTKSNKIASSEYVCGLPTKPLHDKESHFFQRCLFKPNSYVLLLNQCFVKLR EEECCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCEEEEC PTHAFFYLSYYPFYFKPIAQHGPM CCEEEEEEEECCCEEEECHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA