| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446915
Identifier: 46446915
GI number: 46446915
Start: 1535447
End: 1535668
Strand: Direct
Name: 46446915
Synonym: pc1281
Alternate gene names: NA
Gene position: 1535447-1535668 (Clockwise)
Preceding gene: 46446912
Following gene: 46446917
Centisome position: 63.59
GC content: 34.23
Gene sequence:
>222_bases GTGGCAAATGATCTAGACAACAGTGCTGACGATAACTATAAAGTCTACAAAAAAAGATGGCGAATAGAAAAATATTTCAA ATCGATCAAGCAAAATGCAAGCCTTGAAAAATCATCAACTAAAGTGATACGCTCACAAAAACATCTTATTTTCGCATCTA TTATCGCTTATTGCAAGCTAAAATGCTTCGACTTAAAACTTCACTTGGTCATTTCGCGCTAA
Upstream 100 bases:
>100_bases GAAAAAAGGATTATTTGCTTAAGGATTATTCCTTTCCTGTCTCATTCATGGACTTAAGATCTTCAAAAGCGAAGACAGCT CTGTAGGCATCCTATATCTT
Downstream 100 bases:
>100_bases AATACAAGTTATGTGTTAAGGCTAATCAAATGGCTTTTCAATCGTGGAAATTTCTAAGAGAAAAAGCTACGCTTACGTAA TGTGAGTAAGGCATTTTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 73; Mature: 72
Protein sequence:
>73_residues MANDLDNSADDNYKVYKKRWRIEKYFKSIKQNASLEKSSTKVIRSQKHLIFASIIAYCKLKCFDLKLHLVISR
Sequences:
>Translated_73_residues MANDLDNSADDNYKVYKKRWRIEKYFKSIKQNASLEKSSTKVIRSQKHLIFASIIAYCKLKCFDLKLHLVISR >Mature_72_residues ANDLDNSADDNYKVYKKRWRIEKYFKSIKQNASLEKSSTKVIRSQKHLIFASIIAYCKLKCFDLKLHLVISR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8654; Mature: 8523
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANDLDNSADDNYKVYKKRWRIEKYFKSIKQNASLEKSSTKVIRSQKHLIFASIIAYCKL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH KCFDLKLHLVISR HHEEEEEEEEEEC >Mature Secondary Structure ANDLDNSADDNYKVYKKRWRIEKYFKSIKQNASLEKSSTKVIRSQKHLIFASIIAYCKL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH KCFDLKLHLVISR HHEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA