Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446906

Identifier: 46446906

GI number: 46446906

Start: 1522243

End: 1524099

Strand: Direct

Name: 46446906

Synonym: pc1272

Alternate gene names: NA

Gene position: 1522243-1524099 (Clockwise)

Preceding gene: 46446905

Following gene: 46446908

Centisome position: 63.05

GC content: 37.16

Gene sequence:

>1857_bases
TTGTGCAAAACAATTTTTCAGTCCTTTCTCAACTTATTCTTTAATTATCTCCAAAAAGAGCAGCTTCAGTCTCAATGGAG
AGAAAGTTTTTGGGGGCAAAAAGAAATTATCGTTTCTAATTTTACCACAACTCATTCAGAATCTGGGATGTCTTTATCAA
ATCCAAGCCAAATTTCATGCTTTGCCTCACCTCCCCCTATATTGAGCTTCCAGGATAATACTTACCTAAAAATTTCAAGT
TCCCAAAAAACTTTGTTAATGGAAAAATCACCCTATTTTAAAATTCTTTGGTCGGGAAATTTTCGGGAAACCCTCCAAGA
TCCCCTCGCTTTGAAGCAAAAAGAGTTTACTCATCTACTCAATTGTTTGATAAATGCTAATTTTAAAGTTCCTTTGCAAA
AGATCCCTTCTTTGATTCAACTAGCAGATTACTATCAACTGACAAAAATTGTAAAAAATTTAGAAAAACAGTTGATTGCT
GAGTGTAAATTAAAGAAATATGAGCTGTTTAACTCTAGAGAAGACAGTCTATTAGAGTTAAAAAAACTTTTAAATTTTGC
GAACCAATATCAATTAAACACTTTAAAAAATTATTTAGAACTCACAGTTGTAAGTTCATTATTAAATCAGACATCTCATT
TAACGGGATTTGAAAAAATTTTAAATCACTTTCCAAATGAAATAGAAGAACTCAATTTTTCAAAGAATGCTTCTTTGACT
GATGCCCATCTCTTAGCGTTAAAAAATTGTAAAAATTTAAAAGTGCTTCATCTCCAAGAGTGCCGCAATCTCACGGATGC
AGGATTAGCATATTTGACACCCTTAACGACTTTACAGCATTTAAATCTGGCTGGATGCAAATTTGCTAATGCAGGATTAG
CGCATTTGACACCTTTGGTGGCTTTACAACATTTGAATCTGAGCCATTGTAGAAATCTTACGGATGCTGGATTACCGCAT
TTGACACTCTTAACGGCTTTGACCTATTTGAATCTGAGCCATTGTAGAAATATCACAGATGCTGGATTAGCGCATTTGAC
ACCTCTAACGGCTTTGACCTATTTGAATCTGAGTTCGTGTAATAATCTCACTGACGCTGGATTAGCGCATTTGACACCCT
TAACGGCTTTGACCTATTTGAATCTGAGTTCGTGTAATAATCTCACTGACGCTGGATTGGCGCATTTGACACCTTTAGTG
ACTTTAACGCATTTGAACCTGAGTTGGTGCTATAATTTCACAGATGCAGGATTAGCGCATTTAACTCCCTTAGTGGCTTT
GCAGCATTTGGATCTGGGCCATTGTAGAAATATCACGGATGCTGGATTGGCGCATTTGACACCTTTAGTAGCTTTAACGC
ATTTGAACCTAAGTTGGTGCTATAATTTTACAGATGCTGGATTGGCGCATTTAGCTCCCTTAGTGGCTTTGCAGCATTTA
GATCTGAACGGATGCTGGCAACTCACCGATGCTGGATTAGCACATTTGGCACCTTTAGTGGCTTTAACGCATTTAGATCT
GAGTTCCTGCAATCATCTCACTGACGCTGGATTGCCGCATTTAACGCCTTTAGTCGCTTTGCAGCACTTAGATTTGAGCT
ATTGTAGAAATCTTACTGACGCTGGATTAGCGCATTTGGCACCTTTAGTGGCTTTAACACATTTGAACCTGAGTTCGTGT
AATCATTTTACTGATGCCGGATTAACACATTTGACACCCTTATTGGCTTTGCAGGATTTGAATTTGAACTATTGCGAAAA
TTTCACTGACGCTGGATTGGCGCATTTTAAATCCTTAGCAACTTTCCCAAATTTGAATCTAATTTGTTACCAAAATTGCA
TCAATCTAGAGGATTAG

Upstream 100 bases:

>100_bases
TAATCCGGTATTTAATTCTAGTAATCTCCTTGTTAGCACAGACACTTATTCTTACTACCAATCGAACAATCATTTAAAAT
TTTCTGAACGAATTCATTTA

Downstream 100 bases:

>100_bases
TGCATTTGATGTACTTAATAATATAATATATTTGCATCTGAGTTGGTGCAAAAACTTTCAATAACGCTGAATATAAAAAT
TTGTTAGTTCCTTAAATTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 618; Mature: 618

Protein sequence:

>618_residues
MCKTIFQSFLNLFFNYLQKEQLQSQWRESFWGQKEIIVSNFTTTHSESGMSLSNPSQISCFASPPPILSFQDNTYLKISS
SQKTLLMEKSPYFKILWSGNFRETLQDPLALKQKEFTHLLNCLINANFKVPLQKIPSLIQLADYYQLTKIVKNLEKQLIA
ECKLKKYELFNSREDSLLELKKLLNFANQYQLNTLKNYLELTVVSSLLNQTSHLTGFEKILNHFPNEIEELNFSKNASLT
DAHLLALKNCKNLKVLHLQECRNLTDAGLAYLTPLTTLQHLNLAGCKFANAGLAHLTPLVALQHLNLSHCRNLTDAGLPH
LTLLTALTYLNLSHCRNITDAGLAHLTPLTALTYLNLSSCNNLTDAGLAHLTPLTALTYLNLSSCNNLTDAGLAHLTPLV
TLTHLNLSWCYNFTDAGLAHLTPLVALQHLDLGHCRNITDAGLAHLTPLVALTHLNLSWCYNFTDAGLAHLAPLVALQHL
DLNGCWQLTDAGLAHLAPLVALTHLDLSSCNHLTDAGLPHLTPLVALQHLDLSYCRNLTDAGLAHLAPLVALTHLNLSSC
NHFTDAGLTHLTPLLALQDLNLNYCENFTDAGLAHFKSLATFPNLNLICYQNCINLED

Sequences:

>Translated_618_residues
MCKTIFQSFLNLFFNYLQKEQLQSQWRESFWGQKEIIVSNFTTTHSESGMSLSNPSQISCFASPPPILSFQDNTYLKISS
SQKTLLMEKSPYFKILWSGNFRETLQDPLALKQKEFTHLLNCLINANFKVPLQKIPSLIQLADYYQLTKIVKNLEKQLIA
ECKLKKYELFNSREDSLLELKKLLNFANQYQLNTLKNYLELTVVSSLLNQTSHLTGFEKILNHFPNEIEELNFSKNASLT
DAHLLALKNCKNLKVLHLQECRNLTDAGLAYLTPLTTLQHLNLAGCKFANAGLAHLTPLVALQHLNLSHCRNLTDAGLPH
LTLLTALTYLNLSHCRNITDAGLAHLTPLTALTYLNLSSCNNLTDAGLAHLTPLTALTYLNLSSCNNLTDAGLAHLTPLV
TLTHLNLSWCYNFTDAGLAHLTPLVALQHLDLGHCRNITDAGLAHLTPLVALTHLNLSWCYNFTDAGLAHLAPLVALQHL
DLNGCWQLTDAGLAHLAPLVALTHLDLSSCNHLTDAGLPHLTPLVALQHLDLSYCRNLTDAGLAHLAPLVALTHLNLSSC
NHFTDAGLTHLTPLLALQDLNLNYCENFTDAGLAHFKSLATFPNLNLICYQNCINLED
>Mature_618_residues
MCKTIFQSFLNLFFNYLQKEQLQSQWRESFWGQKEIIVSNFTTTHSESGMSLSNPSQISCFASPPPILSFQDNTYLKISS
SQKTLLMEKSPYFKILWSGNFRETLQDPLALKQKEFTHLLNCLINANFKVPLQKIPSLIQLADYYQLTKIVKNLEKQLIA
ECKLKKYELFNSREDSLLELKKLLNFANQYQLNTLKNYLELTVVSSLLNQTSHLTGFEKILNHFPNEIEELNFSKNASLT
DAHLLALKNCKNLKVLHLQECRNLTDAGLAYLTPLTTLQHLNLAGCKFANAGLAHLTPLVALQHLNLSHCRNLTDAGLPH
LTLLTALTYLNLSHCRNITDAGLAHLTPLTALTYLNLSSCNNLTDAGLAHLTPLTALTYLNLSSCNNLTDAGLAHLTPLV
TLTHLNLSWCYNFTDAGLAHLTPLVALQHLDLGHCRNITDAGLAHLTPLVALTHLNLSWCYNFTDAGLAHLAPLVALQHL
DLNGCWQLTDAGLAHLAPLVALTHLDLSSCNHLTDAGLPHLTPLVALQHLDLSYCRNLTDAGLAHLAPLVALTHLNLSSC
NHFTDAGLTHLTPLLALQDLNLNYCENFTDAGLAHFKSLATFPNLNLICYQNCINLED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI22748931, Length=305, Percent_Identity=37.0491803278689, Blast_Score=154, Evalue=2e-37,
Organism=Homo sapiens, GI161333852, Length=440, Percent_Identity=27.0454545454545, Blast_Score=126, Evalue=5e-29,
Organism=Homo sapiens, GI161333854, Length=391, Percent_Identity=27.1099744245524, Blast_Score=119, Evalue=1e-26,
Organism=Homo sapiens, GI284447308, Length=314, Percent_Identity=33.1210191082803, Blast_Score=111, Evalue=2e-24,
Organism=Homo sapiens, GI27734755, Length=291, Percent_Identity=32.9896907216495, Blast_Score=106, Evalue=7e-23,
Organism=Homo sapiens, GI6912466, Length=282, Percent_Identity=30.1418439716312, Blast_Score=100, Evalue=6e-21,
Organism=Homo sapiens, GI289666746, Length=255, Percent_Identity=36.078431372549, Blast_Score=95, Evalue=3e-19,
Organism=Homo sapiens, GI296531375, Length=260, Percent_Identity=34.2307692307692, Blast_Score=94, Evalue=4e-19,
Organism=Homo sapiens, GI284447314, Length=242, Percent_Identity=32.2314049586777, Blast_Score=84, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI25151694, Length=307, Percent_Identity=30.2931596091205, Blast_Score=104, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI25151696, Length=307, Percent_Identity=30.2931596091205, Blast_Score=104, Evalue=2e-22,
Organism=Saccharomyces cerevisiae, GI6322549, Length=383, Percent_Identity=29.5039164490862, Blast_Score=102, Evalue=1e-22,
Organism=Drosophila melanogaster, GI17647819, Length=301, Percent_Identity=34.5514950166113, Blast_Score=136, Evalue=4e-32,
Organism=Drosophila melanogaster, GI24662818, Length=259, Percent_Identity=37.4517374517375, Blast_Score=112, Evalue=8e-25,
Organism=Drosophila melanogaster, GI21357913, Length=263, Percent_Identity=33.0798479087452, Blast_Score=96, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24652783, Length=322, Percent_Identity=28.8819875776398, Blast_Score=95, Evalue=2e-19,
Organism=Drosophila melanogaster, GI161076547, Length=322, Percent_Identity=28.8819875776398, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI161076549, Length=322, Percent_Identity=28.8819875776398, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI161076545, Length=322, Percent_Identity=28.8819875776398, Blast_Score=94, Evalue=4e-19,
Organism=Drosophila melanogaster, GI19921840, Length=305, Percent_Identity=29.5081967213115, Blast_Score=68, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68710; Mature: 68710

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCKTIFQSFLNLFFNYLQKEQLQSQWRESFWGQKEIIVSNFTTTHSESGMSLSNPSQISC
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCEEE
FASPPPILSFQDNTYLKISSSQKTLLMEKSPYFKILWSGNFRETLQDPLALKQKEFTHLL
ECCCCCEEEECCCCEEEEECCCCEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHH
NCLINANFKVPLQKIPSLIQLADYYQLTKIVKNLEKQLIAECKLKKYELFNSREDSLLEL
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
KKLLNFANQYQLNTLKNYLELTVVSSLLNQTSHLTGFEKILNHFPNEIEELNFSKNASLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCC
DAHLLALKNCKNLKVLHLQECRNLTDAGLAYLTPLTTLQHLNLAGCKFANAGLAHLTPLV
HHHHHHHHCCCCCEEEEHHHHCCCHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
ALQHLNLSHCRNLTDAGLPHLTLLTALTYLNLSHCRNITDAGLAHLTPLTALTYLNLSSC
HHHHCCHHHHCCCHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEHHHC
NNLTDAGLAHLTPLTALTYLNLSSCNNLTDAGLAHLTPLVTLTHLNLSWCYNFTDAGLAH
CCCCCCCHHHHHHHHHHHHHEHHHCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHH
LTPLVALQHLDLGHCRNITDAGLAHLTPLVALTHLNLSWCYNFTDAGLAHLAPLVALQHL
HHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHCCHHEEECCCCCCHHHHHHHHHHHHC
DLNGCWQLTDAGLAHLAPLVALTHLDLSSCNHLTDAGLPHLTPLVALQHLDLSYCRNLTD
CCCCCEEHHHCCHHHHHHHHHHHHCCHHHCCCHHHCCCCHHHHHHHHHHCCHHHHCCCHH
AGLAHLAPLVALTHLNLSSCNHFTDAGLTHLTPLLALQDLNLNYCENFTDAGLAHFKSLA
HHHHHHHHHHHHHHCCHHHCCCHHHCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHH
TFPNLNLICYQNCINLED
CCCCCCEEEEECCCCCCC
>Mature Secondary Structure
MCKTIFQSFLNLFFNYLQKEQLQSQWRESFWGQKEIIVSNFTTTHSESGMSLSNPSQISC
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCEEE
FASPPPILSFQDNTYLKISSSQKTLLMEKSPYFKILWSGNFRETLQDPLALKQKEFTHLL
ECCCCCEEEECCCCEEEEECCCCEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHH
NCLINANFKVPLQKIPSLIQLADYYQLTKIVKNLEKQLIAECKLKKYELFNSREDSLLEL
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
KKLLNFANQYQLNTLKNYLELTVVSSLLNQTSHLTGFEKILNHFPNEIEELNFSKNASLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCC
DAHLLALKNCKNLKVLHLQECRNLTDAGLAYLTPLTTLQHLNLAGCKFANAGLAHLTPLV
HHHHHHHHCCCCCEEEEHHHHCCCHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
ALQHLNLSHCRNLTDAGLPHLTLLTALTYLNLSHCRNITDAGLAHLTPLTALTYLNLSSC
HHHHCCHHHHCCCHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEHHHC
NNLTDAGLAHLTPLTALTYLNLSSCNNLTDAGLAHLTPLVTLTHLNLSWCYNFTDAGLAH
CCCCCCCHHHHHHHHHHHHHEHHHCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHH
LTPLVALQHLDLGHCRNITDAGLAHLTPLVALTHLNLSWCYNFTDAGLAHLAPLVALQHL
HHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHCCHHEEECCCCCCHHHHHHHHHHHHC
DLNGCWQLTDAGLAHLAPLVALTHLDLSSCNHLTDAGLPHLTPLVALQHLDLSYCRNLTD
CCCCCEEHHHCCHHHHHHHHHHHHCCHHHCCCHHHCCCCHHHHHHHHHHCCHHHHCCCHH
AGLAHLAPLVALTHLNLSSCNHFTDAGLTHLTPLLALQDLNLNYCENFTDAGLAHFKSLA
HHHHHHHHHHHHHHCCHHHCCCHHHCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHH
TFPNLNLICYQNCINLED
CCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA