| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446831
Identifier: 46446831
GI number: 46446831
Start: 1429613
End: 1431613
Strand: Direct
Name: 46446831
Synonym: pc1197
Alternate gene names: NA
Gene position: 1429613-1431613 (Clockwise)
Preceding gene: 46446830
Following gene: 46446833
Centisome position: 59.21
GC content: 38.63
Gene sequence:
>2001_bases TTGCCTAATTTAGAAGAAAGTAGTACGCCAACGATCCCAGCTTCCGCTCTTTCACCTTCATCTGATGAAATTCAACTGAG CTTTCAAGAGGGAACTTTTCTAACTATTTCTCCTTCTCAGCTAGATTTATTAAGGGAAAAATCATATTACTTTAAGAATC TATGGTCGGGGCAATTTCAAGAAACCCTGCAACACCCTCTCGATTTAACACAAAAAGACTTTACGCTTTTGCTTAATTTC CTGATGGACGCTAACTTTAAAGTTCCCTTAGAAGAAATTACTTCTGCCATTCAACTCGCCGATTATTATGAATTGACAGA AGTGGTGAAGAATTTAGAAGAACAGCTGATAGATGGGTACGAATCTCAGAGATTTGAACCTTTTAACTCCACTGAAGAAA GTTTAGTCGGATTAAAAAAACTTTTAAATTTTGCACATCGCTGTCAATTAAATAGATTGAAGGATTATTTAGAATCGACC GTTGTGAACGCCTTATTAAACCAGACTTTTCAGTTAGCGGAGTTTGAAAGAATTATAAATCACCTCTCAGATGAGATAGA AGCTCTTGATTTTTTTAACAATATTTATTTGACCGATGCCCATCTTTTAGCATTAAAAAATTGTAAAAATTTAAAAATAC TTCATTTTAAGAATTGTCGAGTCATCACTGATGCAGGATTAGCACATTTAACACCCTTAACGTCTTTACAGCGTTTAAAT CTAAGCAAACTATGGTGTATCACCGATGCTGGATTAGCCCATTTGACAACTTTAAAGGCTTTGCAGCATCTAGATCTAAG CCAATGCAGTAAACTCACTGACGATGGATTAGCACATTTAACACCCTTAACAGCTTTGCAGCATTTAGGTCTAAATTACT GTGAGAATCTCACCGATGCAGGATTAGCCCATTTGACACTCTTAACGGGTTTGCAGCATCTTGATTTAAGCAATTGTAAG AATCTTACCGATGCAGGATTGGCGCATTTAACATCCTTAATGGCTTTGCAGCATCTAGATCTAAGTTGGTGCCTTAAACT CACCGATGCAGGATTAGCCCATTTGACATCTTTAACGGGTTTGCAGCATCTAGATTTAAGCAATTGTAAGAATCTTACCG ATGCAGGATTGGCGCATTTAACATCCTTAATGGCTTTGCAGCATCTAAATCTAAGTTGGTGCCTTAAACTCACCGATGCA GGATTAGCCCATTTGACACCCTTAACGGCCTTGCAGCATCTAAATCTGAGTAGATATAATCTCACGTATGCTGGATTAGC GCATTTGACATCTTTAACGGGTTTGCAGCATCTAGATTTAAGCGGAAGCAGGAAACTTATTGATGCAGGATTAGCCCATT TGAGGCCCTTAGTAGCTTTACAGCATTTAAATCTGACGGGATGCTGGAAACTCACCGATGCAGGATTAGCCCATTTGTCA CCCTTAAAGGCTTTGCAAACTCTAGGTCTAAGTTGGTGCCAGAATCTTACGGGTGCTGGATTAGCCCATTTGAAACCTTT AGTAGCTTTGCAGTATTTAGATTTAAGTAATTGCAATAATCTCACTGATGCTGGATTAGCCCATTTGAGGCCCTTAGTAG CTTTACAGCATTTAAATCTGACGGGATGCTGGAAACTCACCGATGCAGGATTGGCGCATTTAACATCCTTAATGGCTTTG CAGCATCTAAATCTAAGTTGGTGCCTTAAACTCACCGATGCAGGATTAGCCCATTTGAAACCTTTAGTAGCTTTGCAGCA TTTAGATTTAAGTAATTGCAATAATCTCACTGATGAGGGATTAACCCATTTGAGGCCCTTAGTGGCTTTACAGCATTTAA ATCTGAGTAGATATAATCTCACCGATGATGGATTAGCGCATTTGACACCCTTAACGACTTTGCAATATCTAGATCTGAGT AGTTGCTATAATCTCACCGATGCAGGATTAGCACATTTTAAAACTGTAGCAGCTTCGCTCAATTTAAAAATTATTAGGTA G
Upstream 100 bases:
>100_bases TAATTCTAGTCATCTTGTCCGTACAACGGCTCCATCTTATGATCCCCCGCAAGACATTAACGATCAACTTGAGAATGAAA ATACTCCCTTAGGCAATCCT
Downstream 100 bases:
>100_bases AAAAAACTTTCAATTAAACGAGAAATCTGGCGCCAAAAATCAAGGTAATTTGTCTTAAGACAAAGGATAAAATTTCATTA AAGTTGATCAATTTCCATTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 666; Mature: 665
Protein sequence:
>666_residues MPNLEESSTPTIPASALSPSSDEIQLSFQEGTFLTISPSQLDLLREKSYYFKNLWSGQFQETLQHPLDLTQKDFTLLLNF LMDANFKVPLEEITSAIQLADYYELTEVVKNLEEQLIDGYESQRFEPFNSTEESLVGLKKLLNFAHRCQLNRLKDYLEST VVNALLNQTFQLAEFERIINHLSDEIEALDFFNNIYLTDAHLLALKNCKNLKILHFKNCRVITDAGLAHLTPLTSLQRLN LSKLWCITDAGLAHLTTLKALQHLDLSQCSKLTDDGLAHLTPLTALQHLGLNYCENLTDAGLAHLTLLTGLQHLDLSNCK NLTDAGLAHLTSLMALQHLDLSWCLKLTDAGLAHLTSLTGLQHLDLSNCKNLTDAGLAHLTSLMALQHLNLSWCLKLTDA GLAHLTPLTALQHLNLSRYNLTYAGLAHLTSLTGLQHLDLSGSRKLIDAGLAHLRPLVALQHLNLTGCWKLTDAGLAHLS PLKALQTLGLSWCQNLTGAGLAHLKPLVALQYLDLSNCNNLTDAGLAHLRPLVALQHLNLTGCWKLTDAGLAHLTSLMAL QHLNLSWCLKLTDAGLAHLKPLVALQHLDLSNCNNLTDEGLTHLRPLVALQHLNLSRYNLTDDGLAHLTPLTTLQYLDLS SCYNLTDAGLAHFKTVAASLNLKIIR
Sequences:
>Translated_666_residues MPNLEESSTPTIPASALSPSSDEIQLSFQEGTFLTISPSQLDLLREKSYYFKNLWSGQFQETLQHPLDLTQKDFTLLLNF LMDANFKVPLEEITSAIQLADYYELTEVVKNLEEQLIDGYESQRFEPFNSTEESLVGLKKLLNFAHRCQLNRLKDYLEST VVNALLNQTFQLAEFERIINHLSDEIEALDFFNNIYLTDAHLLALKNCKNLKILHFKNCRVITDAGLAHLTPLTSLQRLN LSKLWCITDAGLAHLTTLKALQHLDLSQCSKLTDDGLAHLTPLTALQHLGLNYCENLTDAGLAHLTLLTGLQHLDLSNCK NLTDAGLAHLTSLMALQHLDLSWCLKLTDAGLAHLTSLTGLQHLDLSNCKNLTDAGLAHLTSLMALQHLNLSWCLKLTDA GLAHLTPLTALQHLNLSRYNLTYAGLAHLTSLTGLQHLDLSGSRKLIDAGLAHLRPLVALQHLNLTGCWKLTDAGLAHLS PLKALQTLGLSWCQNLTGAGLAHLKPLVALQYLDLSNCNNLTDAGLAHLRPLVALQHLNLTGCWKLTDAGLAHLTSLMAL QHLNLSWCLKLTDAGLAHLKPLVALQHLDLSNCNNLTDEGLTHLRPLVALQHLNLSRYNLTDDGLAHLTPLTTLQYLDLS SCYNLTDAGLAHFKTVAASLNLKIIR >Mature_665_residues PNLEESSTPTIPASALSPSSDEIQLSFQEGTFLTISPSQLDLLREKSYYFKNLWSGQFQETLQHPLDLTQKDFTLLLNFL MDANFKVPLEEITSAIQLADYYELTEVVKNLEEQLIDGYESQRFEPFNSTEESLVGLKKLLNFAHRCQLNRLKDYLESTV VNALLNQTFQLAEFERIINHLSDEIEALDFFNNIYLTDAHLLALKNCKNLKILHFKNCRVITDAGLAHLTPLTSLQRLNL SKLWCITDAGLAHLTTLKALQHLDLSQCSKLTDDGLAHLTPLTALQHLGLNYCENLTDAGLAHLTLLTGLQHLDLSNCKN LTDAGLAHLTSLMALQHLDLSWCLKLTDAGLAHLTSLTGLQHLDLSNCKNLTDAGLAHLTSLMALQHLNLSWCLKLTDAG LAHLTPLTALQHLNLSRYNLTYAGLAHLTSLTGLQHLDLSGSRKLIDAGLAHLRPLVALQHLNLTGCWKLTDAGLAHLSP LKALQTLGLSWCQNLTGAGLAHLKPLVALQYLDLSNCNNLTDAGLAHLRPLVALQHLNLTGCWKLTDAGLAHLTSLMALQ HLNLSWCLKLTDAGLAHLKPLVALQHLDLSNCNNLTDEGLTHLRPLVALQHLNLSRYNLTDDGLAHLTPLTTLQYLDLSS CYNLTDAGLAHFKTVAASLNLKIIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI22748931, Length=340, Percent_Identity=33.5294117647059, Blast_Score=149, Evalue=6e-36, Organism=Homo sapiens, GI161333852, Length=464, Percent_Identity=26.7241379310345, Blast_Score=119, Evalue=9e-27, Organism=Homo sapiens, GI161333854, Length=328, Percent_Identity=29.5731707317073, Blast_Score=115, Evalue=1e-25, Organism=Homo sapiens, GI284447308, Length=338, Percent_Identity=31.6568047337278, Blast_Score=110, Evalue=3e-24, Organism=Homo sapiens, GI27734755, Length=310, Percent_Identity=32.258064516129, Blast_Score=106, Evalue=9e-23, Organism=Homo sapiens, GI296531375, Length=375, Percent_Identity=29.6, Blast_Score=98, Evalue=3e-20, Organism=Homo sapiens, GI6912466, Length=305, Percent_Identity=28.8524590163934, Blast_Score=96, Evalue=9e-20, Organism=Homo sapiens, GI289666746, Length=261, Percent_Identity=35.2490421455939, Blast_Score=92, Evalue=1e-18, Organism=Homo sapiens, GI284447314, Length=276, Percent_Identity=31.1594202898551, Blast_Score=89, Evalue=2e-17, Organism=Caenorhabditis elegans, GI25151694, Length=315, Percent_Identity=29.8412698412698, Blast_Score=98, Evalue=2e-20, Organism=Caenorhabditis elegans, GI25151696, Length=315, Percent_Identity=29.8412698412698, Blast_Score=97, Evalue=2e-20, Organism=Saccharomyces cerevisiae, GI6322549, Length=360, Percent_Identity=27.5, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI17647819, Length=320, Percent_Identity=33.75, Blast_Score=133, Evalue=4e-31, Organism=Drosophila melanogaster, GI24662818, Length=178, Percent_Identity=38.7640449438202, Blast_Score=96, Evalue=6e-20, Organism=Drosophila melanogaster, GI161076547, Length=312, Percent_Identity=29.4871794871795, Blast_Score=85, Evalue=1e-16, Organism=Drosophila melanogaster, GI24652783, Length=312, Percent_Identity=29.4871794871795, Blast_Score=85, Evalue=2e-16, Organism=Drosophila melanogaster, GI161076549, Length=312, Percent_Identity=29.4871794871795, Blast_Score=85, Evalue=2e-16, Organism=Drosophila melanogaster, GI161076545, Length=310, Percent_Identity=29.6774193548387, Blast_Score=84, Evalue=3e-16, Organism=Drosophila melanogaster, GI21357913, Length=275, Percent_Identity=32.3636363636364, Blast_Score=80, Evalue=4e-15, Organism=Drosophila melanogaster, GI19921840, Length=383, Percent_Identity=25.8485639686684, Blast_Score=76, Evalue=9e-14, Organism=Drosophila melanogaster, GI24646754, Length=249, Percent_Identity=28.1124497991968, Blast_Score=68, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73606; Mature: 73475
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: PS50097 BTB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNLEESSTPTIPASALSPSSDEIQLSFQEGTFLTISPSQLDLLREKSYYFKNLWSGQFQ CCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEECCHHHHHHHHHHHHHHHHCCHHHH ETLQHPLDLTQKDFTLLLNFLMDANFKVPLEEITSAIQLADYYELTEVVKNLEEQLIDGY HHHHCHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH ESQRFEPFNSTEESLVGLKKLLNFAHRCQLNRLKDYLESTVVNALLNQTFQLAEFERIIN HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HLSDEIEALDFFNNIYLTDAHLLALKNCKNLKILHFKNCRVITDAGLAHLTPLTSLQRLN HHHHHHHHHHHHHCEEEECHHHHHHHCCCCEEEEEECCCEEEECCCHHHHHHHHHHHHCC LSKLWCITDAGLAHLTTLKALQHLDLSQCSKLTDDGLAHLTPLTALQHLGLNYCENLTDA CHHEEEEECCCHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHCHHHH GLAHLTLLTGLQHLDLSNCKNLTDAGLAHLTSLMALQHLDLSWCLKLTDAGLAHLTSLTG HHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC LQHLDLSNCKNLTDAGLAHLTSLMALQHLNLSWCLKLTDAGLAHLTPLTALQHLNLSRYN CCCCCHHHCCCCHHHHHHHHHHHHHHHHCCHHHEEEECCCCHHHHHHHHHHHHCCCCHHC LTYAGLAHLTSLTGLQHLDLSGSRKLIDAGLAHLRPLVALQHLNLTGCWKLTDAGLAHLS CHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHH PLKALQTLGLSWCQNLTGAGLAHLKPLVALQYLDLSNCNNLTDAGLAHLRPLVALQHLNL HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCC TGCWKLTDAGLAHLTSLMALQHLNLSWCLKLTDAGLAHLKPLVALQHLDLSNCNNLTDEG CEEEEHHHHHHHHHHHHHHHHHCCHHHEEEEHHCCHHHHHHHHHHHHCCCCCCCCCCHHH LTHLRPLVALQHLNLSRYNLTDDGLAHLTPLTTLQYLDLSSCYNLTDAGLAHFKTVAASL HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHC NLKIIR CEEEEC >Mature Secondary Structure PNLEESSTPTIPASALSPSSDEIQLSFQEGTFLTISPSQLDLLREKSYYFKNLWSGQFQ CCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEECCHHHHHHHHHHHHHHHHCCHHHH ETLQHPLDLTQKDFTLLLNFLMDANFKVPLEEITSAIQLADYYELTEVVKNLEEQLIDGY HHHHCHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH ESQRFEPFNSTEESLVGLKKLLNFAHRCQLNRLKDYLESTVVNALLNQTFQLAEFERIIN HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HLSDEIEALDFFNNIYLTDAHLLALKNCKNLKILHFKNCRVITDAGLAHLTPLTSLQRLN HHHHHHHHHHHHHCEEEECHHHHHHHCCCCEEEEEECCCEEEECCCHHHHHHHHHHHHCC LSKLWCITDAGLAHLTTLKALQHLDLSQCSKLTDDGLAHLTPLTALQHLGLNYCENLTDA CHHEEEEECCCHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHCHHHH GLAHLTLLTGLQHLDLSNCKNLTDAGLAHLTSLMALQHLDLSWCLKLTDAGLAHLTSLTG HHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC LQHLDLSNCKNLTDAGLAHLTSLMALQHLNLSWCLKLTDAGLAHLTPLTALQHLNLSRYN CCCCCHHHCCCCHHHHHHHHHHHHHHHHCCHHHEEEECCCCHHHHHHHHHHHHCCCCHHC LTYAGLAHLTSLTGLQHLDLSGSRKLIDAGLAHLRPLVALQHLNLTGCWKLTDAGLAHLS CHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHH PLKALQTLGLSWCQNLTGAGLAHLKPLVALQYLDLSNCNNLTDAGLAHLRPLVALQHLNL HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCC TGCWKLTDAGLAHLTSLMALQHLNLSWCLKLTDAGLAHLKPLVALQHLDLSNCNNLTDEG CEEEEHHHHHHHHHHHHHHHHHCCHHHEEEEHHCCHHHHHHHHHHHHCCCCCCCCCCHHH LTHLRPLVALQHLNLSRYNLTDDGLAHLTPLTTLQYLDLSSCYNLTDAGLAHFKTVAASL HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHC NLKIIR CEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA