Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446831

Identifier: 46446831

GI number: 46446831

Start: 1429613

End: 1431613

Strand: Direct

Name: 46446831

Synonym: pc1197

Alternate gene names: NA

Gene position: 1429613-1431613 (Clockwise)

Preceding gene: 46446830

Following gene: 46446833

Centisome position: 59.21

GC content: 38.63

Gene sequence:

>2001_bases
TTGCCTAATTTAGAAGAAAGTAGTACGCCAACGATCCCAGCTTCCGCTCTTTCACCTTCATCTGATGAAATTCAACTGAG
CTTTCAAGAGGGAACTTTTCTAACTATTTCTCCTTCTCAGCTAGATTTATTAAGGGAAAAATCATATTACTTTAAGAATC
TATGGTCGGGGCAATTTCAAGAAACCCTGCAACACCCTCTCGATTTAACACAAAAAGACTTTACGCTTTTGCTTAATTTC
CTGATGGACGCTAACTTTAAAGTTCCCTTAGAAGAAATTACTTCTGCCATTCAACTCGCCGATTATTATGAATTGACAGA
AGTGGTGAAGAATTTAGAAGAACAGCTGATAGATGGGTACGAATCTCAGAGATTTGAACCTTTTAACTCCACTGAAGAAA
GTTTAGTCGGATTAAAAAAACTTTTAAATTTTGCACATCGCTGTCAATTAAATAGATTGAAGGATTATTTAGAATCGACC
GTTGTGAACGCCTTATTAAACCAGACTTTTCAGTTAGCGGAGTTTGAAAGAATTATAAATCACCTCTCAGATGAGATAGA
AGCTCTTGATTTTTTTAACAATATTTATTTGACCGATGCCCATCTTTTAGCATTAAAAAATTGTAAAAATTTAAAAATAC
TTCATTTTAAGAATTGTCGAGTCATCACTGATGCAGGATTAGCACATTTAACACCCTTAACGTCTTTACAGCGTTTAAAT
CTAAGCAAACTATGGTGTATCACCGATGCTGGATTAGCCCATTTGACAACTTTAAAGGCTTTGCAGCATCTAGATCTAAG
CCAATGCAGTAAACTCACTGACGATGGATTAGCACATTTAACACCCTTAACAGCTTTGCAGCATTTAGGTCTAAATTACT
GTGAGAATCTCACCGATGCAGGATTAGCCCATTTGACACTCTTAACGGGTTTGCAGCATCTTGATTTAAGCAATTGTAAG
AATCTTACCGATGCAGGATTGGCGCATTTAACATCCTTAATGGCTTTGCAGCATCTAGATCTAAGTTGGTGCCTTAAACT
CACCGATGCAGGATTAGCCCATTTGACATCTTTAACGGGTTTGCAGCATCTAGATTTAAGCAATTGTAAGAATCTTACCG
ATGCAGGATTGGCGCATTTAACATCCTTAATGGCTTTGCAGCATCTAAATCTAAGTTGGTGCCTTAAACTCACCGATGCA
GGATTAGCCCATTTGACACCCTTAACGGCCTTGCAGCATCTAAATCTGAGTAGATATAATCTCACGTATGCTGGATTAGC
GCATTTGACATCTTTAACGGGTTTGCAGCATCTAGATTTAAGCGGAAGCAGGAAACTTATTGATGCAGGATTAGCCCATT
TGAGGCCCTTAGTAGCTTTACAGCATTTAAATCTGACGGGATGCTGGAAACTCACCGATGCAGGATTAGCCCATTTGTCA
CCCTTAAAGGCTTTGCAAACTCTAGGTCTAAGTTGGTGCCAGAATCTTACGGGTGCTGGATTAGCCCATTTGAAACCTTT
AGTAGCTTTGCAGTATTTAGATTTAAGTAATTGCAATAATCTCACTGATGCTGGATTAGCCCATTTGAGGCCCTTAGTAG
CTTTACAGCATTTAAATCTGACGGGATGCTGGAAACTCACCGATGCAGGATTGGCGCATTTAACATCCTTAATGGCTTTG
CAGCATCTAAATCTAAGTTGGTGCCTTAAACTCACCGATGCAGGATTAGCCCATTTGAAACCTTTAGTAGCTTTGCAGCA
TTTAGATTTAAGTAATTGCAATAATCTCACTGATGAGGGATTAACCCATTTGAGGCCCTTAGTGGCTTTACAGCATTTAA
ATCTGAGTAGATATAATCTCACCGATGATGGATTAGCGCATTTGACACCCTTAACGACTTTGCAATATCTAGATCTGAGT
AGTTGCTATAATCTCACCGATGCAGGATTAGCACATTTTAAAACTGTAGCAGCTTCGCTCAATTTAAAAATTATTAGGTA
G

Upstream 100 bases:

>100_bases
TAATTCTAGTCATCTTGTCCGTACAACGGCTCCATCTTATGATCCCCCGCAAGACATTAACGATCAACTTGAGAATGAAA
ATACTCCCTTAGGCAATCCT

Downstream 100 bases:

>100_bases
AAAAAACTTTCAATTAAACGAGAAATCTGGCGCCAAAAATCAAGGTAATTTGTCTTAAGACAAAGGATAAAATTTCATTA
AAGTTGATCAATTTCCATTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 666; Mature: 665

Protein sequence:

>666_residues
MPNLEESSTPTIPASALSPSSDEIQLSFQEGTFLTISPSQLDLLREKSYYFKNLWSGQFQETLQHPLDLTQKDFTLLLNF
LMDANFKVPLEEITSAIQLADYYELTEVVKNLEEQLIDGYESQRFEPFNSTEESLVGLKKLLNFAHRCQLNRLKDYLEST
VVNALLNQTFQLAEFERIINHLSDEIEALDFFNNIYLTDAHLLALKNCKNLKILHFKNCRVITDAGLAHLTPLTSLQRLN
LSKLWCITDAGLAHLTTLKALQHLDLSQCSKLTDDGLAHLTPLTALQHLGLNYCENLTDAGLAHLTLLTGLQHLDLSNCK
NLTDAGLAHLTSLMALQHLDLSWCLKLTDAGLAHLTSLTGLQHLDLSNCKNLTDAGLAHLTSLMALQHLNLSWCLKLTDA
GLAHLTPLTALQHLNLSRYNLTYAGLAHLTSLTGLQHLDLSGSRKLIDAGLAHLRPLVALQHLNLTGCWKLTDAGLAHLS
PLKALQTLGLSWCQNLTGAGLAHLKPLVALQYLDLSNCNNLTDAGLAHLRPLVALQHLNLTGCWKLTDAGLAHLTSLMAL
QHLNLSWCLKLTDAGLAHLKPLVALQHLDLSNCNNLTDEGLTHLRPLVALQHLNLSRYNLTDDGLAHLTPLTTLQYLDLS
SCYNLTDAGLAHFKTVAASLNLKIIR

Sequences:

>Translated_666_residues
MPNLEESSTPTIPASALSPSSDEIQLSFQEGTFLTISPSQLDLLREKSYYFKNLWSGQFQETLQHPLDLTQKDFTLLLNF
LMDANFKVPLEEITSAIQLADYYELTEVVKNLEEQLIDGYESQRFEPFNSTEESLVGLKKLLNFAHRCQLNRLKDYLEST
VVNALLNQTFQLAEFERIINHLSDEIEALDFFNNIYLTDAHLLALKNCKNLKILHFKNCRVITDAGLAHLTPLTSLQRLN
LSKLWCITDAGLAHLTTLKALQHLDLSQCSKLTDDGLAHLTPLTALQHLGLNYCENLTDAGLAHLTLLTGLQHLDLSNCK
NLTDAGLAHLTSLMALQHLDLSWCLKLTDAGLAHLTSLTGLQHLDLSNCKNLTDAGLAHLTSLMALQHLNLSWCLKLTDA
GLAHLTPLTALQHLNLSRYNLTYAGLAHLTSLTGLQHLDLSGSRKLIDAGLAHLRPLVALQHLNLTGCWKLTDAGLAHLS
PLKALQTLGLSWCQNLTGAGLAHLKPLVALQYLDLSNCNNLTDAGLAHLRPLVALQHLNLTGCWKLTDAGLAHLTSLMAL
QHLNLSWCLKLTDAGLAHLKPLVALQHLDLSNCNNLTDEGLTHLRPLVALQHLNLSRYNLTDDGLAHLTPLTTLQYLDLS
SCYNLTDAGLAHFKTVAASLNLKIIR
>Mature_665_residues
PNLEESSTPTIPASALSPSSDEIQLSFQEGTFLTISPSQLDLLREKSYYFKNLWSGQFQETLQHPLDLTQKDFTLLLNFL
MDANFKVPLEEITSAIQLADYYELTEVVKNLEEQLIDGYESQRFEPFNSTEESLVGLKKLLNFAHRCQLNRLKDYLESTV
VNALLNQTFQLAEFERIINHLSDEIEALDFFNNIYLTDAHLLALKNCKNLKILHFKNCRVITDAGLAHLTPLTSLQRLNL
SKLWCITDAGLAHLTTLKALQHLDLSQCSKLTDDGLAHLTPLTALQHLGLNYCENLTDAGLAHLTLLTGLQHLDLSNCKN
LTDAGLAHLTSLMALQHLDLSWCLKLTDAGLAHLTSLTGLQHLDLSNCKNLTDAGLAHLTSLMALQHLNLSWCLKLTDAG
LAHLTPLTALQHLNLSRYNLTYAGLAHLTSLTGLQHLDLSGSRKLIDAGLAHLRPLVALQHLNLTGCWKLTDAGLAHLSP
LKALQTLGLSWCQNLTGAGLAHLKPLVALQYLDLSNCNNLTDAGLAHLRPLVALQHLNLTGCWKLTDAGLAHLTSLMALQ
HLNLSWCLKLTDAGLAHLKPLVALQHLDLSNCNNLTDEGLTHLRPLVALQHLNLSRYNLTDDGLAHLTPLTTLQYLDLSS
CYNLTDAGLAHFKTVAASLNLKIIR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI22748931, Length=340, Percent_Identity=33.5294117647059, Blast_Score=149, Evalue=6e-36,
Organism=Homo sapiens, GI161333852, Length=464, Percent_Identity=26.7241379310345, Blast_Score=119, Evalue=9e-27,
Organism=Homo sapiens, GI161333854, Length=328, Percent_Identity=29.5731707317073, Blast_Score=115, Evalue=1e-25,
Organism=Homo sapiens, GI284447308, Length=338, Percent_Identity=31.6568047337278, Blast_Score=110, Evalue=3e-24,
Organism=Homo sapiens, GI27734755, Length=310, Percent_Identity=32.258064516129, Blast_Score=106, Evalue=9e-23,
Organism=Homo sapiens, GI296531375, Length=375, Percent_Identity=29.6, Blast_Score=98, Evalue=3e-20,
Organism=Homo sapiens, GI6912466, Length=305, Percent_Identity=28.8524590163934, Blast_Score=96, Evalue=9e-20,
Organism=Homo sapiens, GI289666746, Length=261, Percent_Identity=35.2490421455939, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI284447314, Length=276, Percent_Identity=31.1594202898551, Blast_Score=89, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI25151694, Length=315, Percent_Identity=29.8412698412698, Blast_Score=98, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI25151696, Length=315, Percent_Identity=29.8412698412698, Blast_Score=97, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6322549, Length=360, Percent_Identity=27.5, Blast_Score=90, Evalue=1e-18,
Organism=Drosophila melanogaster, GI17647819, Length=320, Percent_Identity=33.75, Blast_Score=133, Evalue=4e-31,
Organism=Drosophila melanogaster, GI24662818, Length=178, Percent_Identity=38.7640449438202, Blast_Score=96, Evalue=6e-20,
Organism=Drosophila melanogaster, GI161076547, Length=312, Percent_Identity=29.4871794871795, Blast_Score=85, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24652783, Length=312, Percent_Identity=29.4871794871795, Blast_Score=85, Evalue=2e-16,
Organism=Drosophila melanogaster, GI161076549, Length=312, Percent_Identity=29.4871794871795, Blast_Score=85, Evalue=2e-16,
Organism=Drosophila melanogaster, GI161076545, Length=310, Percent_Identity=29.6774193548387, Blast_Score=84, Evalue=3e-16,
Organism=Drosophila melanogaster, GI21357913, Length=275, Percent_Identity=32.3636363636364, Blast_Score=80, Evalue=4e-15,
Organism=Drosophila melanogaster, GI19921840, Length=383, Percent_Identity=25.8485639686684, Blast_Score=76, Evalue=9e-14,
Organism=Drosophila melanogaster, GI24646754, Length=249, Percent_Identity=28.1124497991968, Blast_Score=68, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 73606; Mature: 73475

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: PS50097 BTB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNLEESSTPTIPASALSPSSDEIQLSFQEGTFLTISPSQLDLLREKSYYFKNLWSGQFQ
CCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEECCHHHHHHHHHHHHHHHHCCHHHH
ETLQHPLDLTQKDFTLLLNFLMDANFKVPLEEITSAIQLADYYELTEVVKNLEEQLIDGY
HHHHCHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
ESQRFEPFNSTEESLVGLKKLLNFAHRCQLNRLKDYLESTVVNALLNQTFQLAEFERIIN
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HLSDEIEALDFFNNIYLTDAHLLALKNCKNLKILHFKNCRVITDAGLAHLTPLTSLQRLN
HHHHHHHHHHHHHCEEEECHHHHHHHCCCCEEEEEECCCEEEECCCHHHHHHHHHHHHCC
LSKLWCITDAGLAHLTTLKALQHLDLSQCSKLTDDGLAHLTPLTALQHLGLNYCENLTDA
CHHEEEEECCCHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHCHHHH
GLAHLTLLTGLQHLDLSNCKNLTDAGLAHLTSLMALQHLDLSWCLKLTDAGLAHLTSLTG
HHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC
LQHLDLSNCKNLTDAGLAHLTSLMALQHLNLSWCLKLTDAGLAHLTPLTALQHLNLSRYN
CCCCCHHHCCCCHHHHHHHHHHHHHHHHCCHHHEEEECCCCHHHHHHHHHHHHCCCCHHC
LTYAGLAHLTSLTGLQHLDLSGSRKLIDAGLAHLRPLVALQHLNLTGCWKLTDAGLAHLS
CHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHH
PLKALQTLGLSWCQNLTGAGLAHLKPLVALQYLDLSNCNNLTDAGLAHLRPLVALQHLNL
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCC
TGCWKLTDAGLAHLTSLMALQHLNLSWCLKLTDAGLAHLKPLVALQHLDLSNCNNLTDEG
CEEEEHHHHHHHHHHHHHHHHHCCHHHEEEEHHCCHHHHHHHHHHHHCCCCCCCCCCHHH
LTHLRPLVALQHLNLSRYNLTDDGLAHLTPLTTLQYLDLSSCYNLTDAGLAHFKTVAASL
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHC
NLKIIR
CEEEEC
>Mature Secondary Structure 
PNLEESSTPTIPASALSPSSDEIQLSFQEGTFLTISPSQLDLLREKSYYFKNLWSGQFQ
CCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEECCHHHHHHHHHHHHHHHHCCHHHH
ETLQHPLDLTQKDFTLLLNFLMDANFKVPLEEITSAIQLADYYELTEVVKNLEEQLIDGY
HHHHCHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
ESQRFEPFNSTEESLVGLKKLLNFAHRCQLNRLKDYLESTVVNALLNQTFQLAEFERIIN
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HLSDEIEALDFFNNIYLTDAHLLALKNCKNLKILHFKNCRVITDAGLAHLTPLTSLQRLN
HHHHHHHHHHHHHCEEEECHHHHHHHCCCCEEEEEECCCEEEECCCHHHHHHHHHHHHCC
LSKLWCITDAGLAHLTTLKALQHLDLSQCSKLTDDGLAHLTPLTALQHLGLNYCENLTDA
CHHEEEEECCCHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHCHHHH
GLAHLTLLTGLQHLDLSNCKNLTDAGLAHLTSLMALQHLDLSWCLKLTDAGLAHLTSLTG
HHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC
LQHLDLSNCKNLTDAGLAHLTSLMALQHLNLSWCLKLTDAGLAHLTPLTALQHLNLSRYN
CCCCCHHHCCCCHHHHHHHHHHHHHHHHCCHHHEEEECCCCHHHHHHHHHHHHCCCCHHC
LTYAGLAHLTSLTGLQHLDLSGSRKLIDAGLAHLRPLVALQHLNLTGCWKLTDAGLAHLS
CHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHH
PLKALQTLGLSWCQNLTGAGLAHLKPLVALQYLDLSNCNNLTDAGLAHLRPLVALQHLNL
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCC
TGCWKLTDAGLAHLTSLMALQHLNLSWCLKLTDAGLAHLKPLVALQHLDLSNCNNLTDEG
CEEEEHHHHHHHHHHHHHHHHHCCHHHEEEEHHCCHHHHHHHHHHHHCCCCCCCCCCHHH
LTHLRPLVALQHLNLSRYNLTDDGLAHLTPLTTLQYLDLSSCYNLTDAGLAHFKTVAASL
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHC
NLKIIR
CEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA