| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446768
Identifier: 46446768
GI number: 46446768
Start: 1362082
End: 1362756
Strand: Direct
Name: 46446768
Synonym: pc1134
Alternate gene names: NA
Gene position: 1362082-1362756 (Clockwise)
Preceding gene: 46446767
Following gene: 46446769
Centisome position: 56.41
GC content: 30.67
Gene sequence:
>675_bases ATGAATTTTCACACATTCAAGTCTATCGCCCTTCATTTTATATTCAGTTTCTTTCTTCTCATGAGTATAGGCTTAACAGC AAAGGAAGAAATTTGTGAAAAAAACTTAAAACAACGTATTGTCCTTGGTAAAAGTGATAGCCCTATCGAAATTTATATTG TCTCAGACTGGTTTTGCAGGTCTTGTAAAAAGTTAGAACCTAGATTAGAAAATCTGTATGATAAATTTAAAAATAAAGCG GCATTTTATTTCATTGATTATCCAATCAATCGTCAAAGCTCTAATTTTTCTCCTTATCACCTCTCATTTTTGATTTTTGA AAAGAAAAACTATCTCAAAGCTCGCCAAGCCTTAATCTGTTTAACAAAAGAAAATCAAAAACCCACAGATTCTGACGTTG AAAAAATAGCTAAATGTAATAAGTTAAATTTTCAAGAACTTGCCTACGAAGATATTAGTAAGGGAATTGATTTTTTTGAT TCAATTGTCAAAAAGTATCAAATCGACGCAACTCCCTCAGTGATCGTTGTCAATAAAAATAATAAGCAATTTGAAATTTT TAAAGGTGGGCAAGCAAAAGAAGAAGCAATTTCTGAAGCAATCGATGTTTTGGAAGGTAAAGCCAAACCAAAAAAAAAGT CCTGGTTTAAAAGTATTTTTGGATTTTCAACCTAA
Upstream 100 bases:
>100_bases TCATTTATGCAAATATAAACCATATATTACAAATTTGAGTTATCAAAATTGTCATCATTATTTTTGATGATTACGATTGA ATTAATTCTTAGGAGGTTAT
Downstream 100 bases:
>100_bases TGTTAATAAGGCCATGAGAAGCTAATCATGGTTGCTTTTGTTAACATCTTAATGAATAATTATTTGTAATTGTTTATGGG GTACAAAAAATGTTTTCATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MNFHTFKSIALHFIFSFFLLMSIGLTAKEEICEKNLKQRIVLGKSDSPIEIYIVSDWFCRSCKKLEPRLENLYDKFKNKA AFYFIDYPINRQSSNFSPYHLSFLIFEKKNYLKARQALICLTKENQKPTDSDVEKIAKCNKLNFQELAYEDISKGIDFFD SIVKKYQIDATPSVIVVNKNNKQFEIFKGGQAKEEAISEAIDVLEGKAKPKKKSWFKSIFGFST
Sequences:
>Translated_224_residues MNFHTFKSIALHFIFSFFLLMSIGLTAKEEICEKNLKQRIVLGKSDSPIEIYIVSDWFCRSCKKLEPRLENLYDKFKNKA AFYFIDYPINRQSSNFSPYHLSFLIFEKKNYLKARQALICLTKENQKPTDSDVEKIAKCNKLNFQELAYEDISKGIDFFD SIVKKYQIDATPSVIVVNKNNKQFEIFKGGQAKEEAISEAIDVLEGKAKPKKKSWFKSIFGFST >Mature_224_residues MNFHTFKSIALHFIFSFFLLMSIGLTAKEEICEKNLKQRIVLGKSDSPIEIYIVSDWFCRSCKKLEPRLENLYDKFKNKA AFYFIDYPINRQSSNFSPYHLSFLIFEKKNYLKARQALICLTKENQKPTDSDVEKIAKCNKLNFQELAYEDISKGIDFFD SIVKKYQIDATPSVIVVNKNNKQFEIFKGGQAKEEAISEAIDVLEGKAKPKKKSWFKSIFGFST
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26041; Mature: 26041
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFHTFKSIALHFIFSFFLLMSIGLTAKEEICEKNLKQRIVLGKSDSPIEIYIVSDWFCR CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEECCCCCCEEEEEECHHHHH SCKKLEPRLENLYDKFKNKAAFYFIDYPINRQSSNFSPYHLSFLIFEKKNYLKARQALIC HHHHHCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCEEEEEEEEECHHHHHHHHHEEE LTKENQKPTDSDVEKIAKCNKLNFQELAYEDISKGIDFFDSIVKKYQIDATPSVIVVNKN EECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC NKQFEIFKGGQAKEEAISEAIDVLEGKAKPKKKSWFKSIFGFST CCEEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC >Mature Secondary Structure MNFHTFKSIALHFIFSFFLLMSIGLTAKEEICEKNLKQRIVLGKSDSPIEIYIVSDWFCR CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEECCCCCCEEEEEECHHHHH SCKKLEPRLENLYDKFKNKAAFYFIDYPINRQSSNFSPYHLSFLIFEKKNYLKARQALIC HHHHHCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCEEEEEEEEECHHHHHHHHHEEE LTKENQKPTDSDVEKIAKCNKLNFQELAYEDISKGIDFFDSIVKKYQIDATPSVIVVNKN EECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC NKQFEIFKGGQAKEEAISEAIDVLEGKAKPKKKSWFKSIFGFST CCEEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA