Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446768

Identifier: 46446768

GI number: 46446768

Start: 1362082

End: 1362756

Strand: Direct

Name: 46446768

Synonym: pc1134

Alternate gene names: NA

Gene position: 1362082-1362756 (Clockwise)

Preceding gene: 46446767

Following gene: 46446769

Centisome position: 56.41

GC content: 30.67

Gene sequence:

>675_bases
ATGAATTTTCACACATTCAAGTCTATCGCCCTTCATTTTATATTCAGTTTCTTTCTTCTCATGAGTATAGGCTTAACAGC
AAAGGAAGAAATTTGTGAAAAAAACTTAAAACAACGTATTGTCCTTGGTAAAAGTGATAGCCCTATCGAAATTTATATTG
TCTCAGACTGGTTTTGCAGGTCTTGTAAAAAGTTAGAACCTAGATTAGAAAATCTGTATGATAAATTTAAAAATAAAGCG
GCATTTTATTTCATTGATTATCCAATCAATCGTCAAAGCTCTAATTTTTCTCCTTATCACCTCTCATTTTTGATTTTTGA
AAAGAAAAACTATCTCAAAGCTCGCCAAGCCTTAATCTGTTTAACAAAAGAAAATCAAAAACCCACAGATTCTGACGTTG
AAAAAATAGCTAAATGTAATAAGTTAAATTTTCAAGAACTTGCCTACGAAGATATTAGTAAGGGAATTGATTTTTTTGAT
TCAATTGTCAAAAAGTATCAAATCGACGCAACTCCCTCAGTGATCGTTGTCAATAAAAATAATAAGCAATTTGAAATTTT
TAAAGGTGGGCAAGCAAAAGAAGAAGCAATTTCTGAAGCAATCGATGTTTTGGAAGGTAAAGCCAAACCAAAAAAAAAGT
CCTGGTTTAAAAGTATTTTTGGATTTTCAACCTAA

Upstream 100 bases:

>100_bases
TCATTTATGCAAATATAAACCATATATTACAAATTTGAGTTATCAAAATTGTCATCATTATTTTTGATGATTACGATTGA
ATTAATTCTTAGGAGGTTAT

Downstream 100 bases:

>100_bases
TGTTAATAAGGCCATGAGAAGCTAATCATGGTTGCTTTTGTTAACATCTTAATGAATAATTATTTGTAATTGTTTATGGG
GTACAAAAAATGTTTTCATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MNFHTFKSIALHFIFSFFLLMSIGLTAKEEICEKNLKQRIVLGKSDSPIEIYIVSDWFCRSCKKLEPRLENLYDKFKNKA
AFYFIDYPINRQSSNFSPYHLSFLIFEKKNYLKARQALICLTKENQKPTDSDVEKIAKCNKLNFQELAYEDISKGIDFFD
SIVKKYQIDATPSVIVVNKNNKQFEIFKGGQAKEEAISEAIDVLEGKAKPKKKSWFKSIFGFST

Sequences:

>Translated_224_residues
MNFHTFKSIALHFIFSFFLLMSIGLTAKEEICEKNLKQRIVLGKSDSPIEIYIVSDWFCRSCKKLEPRLENLYDKFKNKA
AFYFIDYPINRQSSNFSPYHLSFLIFEKKNYLKARQALICLTKENQKPTDSDVEKIAKCNKLNFQELAYEDISKGIDFFD
SIVKKYQIDATPSVIVVNKNNKQFEIFKGGQAKEEAISEAIDVLEGKAKPKKKSWFKSIFGFST
>Mature_224_residues
MNFHTFKSIALHFIFSFFLLMSIGLTAKEEICEKNLKQRIVLGKSDSPIEIYIVSDWFCRSCKKLEPRLENLYDKFKNKA
AFYFIDYPINRQSSNFSPYHLSFLIFEKKNYLKARQALICLTKENQKPTDSDVEKIAKCNKLNFQELAYEDISKGIDFFD
SIVKKYQIDATPSVIVVNKNNKQFEIFKGGQAKEEAISEAIDVLEGKAKPKKKSWFKSIFGFST

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26041; Mature: 26041

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFHTFKSIALHFIFSFFLLMSIGLTAKEEICEKNLKQRIVLGKSDSPIEIYIVSDWFCR
CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEECCCCCCEEEEEECHHHHH
SCKKLEPRLENLYDKFKNKAAFYFIDYPINRQSSNFSPYHLSFLIFEKKNYLKARQALIC
HHHHHCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCEEEEEEEEECHHHHHHHHHEEE
LTKENQKPTDSDVEKIAKCNKLNFQELAYEDISKGIDFFDSIVKKYQIDATPSVIVVNKN
EECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC
NKQFEIFKGGQAKEEAISEAIDVLEGKAKPKKKSWFKSIFGFST
CCEEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MNFHTFKSIALHFIFSFFLLMSIGLTAKEEICEKNLKQRIVLGKSDSPIEIYIVSDWFCR
CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEECCCCCCEEEEEECHHHHH
SCKKLEPRLENLYDKFKNKAAFYFIDYPINRQSSNFSPYHLSFLIFEKKNYLKARQALIC
HHHHHCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCEEEEEEEEECHHHHHHHHHEEE
LTKENQKPTDSDVEKIAKCNKLNFQELAYEDISKGIDFFDSIVKKYQIDATPSVIVVNKN
EECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC
NKQFEIFKGGQAKEEAISEAIDVLEGKAKPKKKSWFKSIFGFST
CCEEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA