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The map label for this gene is 46446751

Identifier: 46446751

GI number: 46446751

Start: 1338417

End: 1340465

Strand: Reverse

Name: 46446751

Synonym: pc1117

Alternate gene names: NA

Gene position: 1340465-1338417 (Counterclockwise)

Preceding gene: 46446752

Following gene: 46446749

Centisome position: 55.52

GC content: 37.38

Gene sequence:

>2049_bases
TTGGAAATTCAAGATGCTCAGACATTTGAACACTTGGATTATTTCAAAGATTCACAAATGTGGACTACAATGACGATTGA
TGAACGGTCTTTATTTGCCCGTTTATTGGTCTTGCAAGGAGCCTCACAACTTGCTGAAGGCAATCATCAAGTCTTGGGCA
ATTTTGAAATTGCTAATCAAGTAACTAATTATTCTCCGGCTATTCTTTATCAACAAGGACTCGTTTTTGCTGCTTATCCA
GACAATTTACGCTGCCTAAATTATGCTCATCAAGCTTTTGATCAAGCAACCCAAAAGGATTCGTCTTTATTTGATGCTTG
GTATCAAGGTGCCTTAGTTTTGTTAAAAATAGGTATGTTTGAAAATGATTTTTATCACTTAACGGAAGCCCAGCAAAAAT
TTCAAAAAGCTTCTAATATGCTTATTGAGAATTCACCTGTTGAAAAAGAATTTTATTGGAAATGGGGTCTCTGCTTAGCT
GTTTTGGGTCGTTGCTGTGGCGAACCAAATGATTTTTACCGTTCGGTCGAAAAATATCGAAAAGCAGAAGAAGTGGGATC
TGCTAGCGAGGAATTTTATATTGATTATGGGCATGCTTTAGCCGATTTAGCTTCTTTATTAGATCAGTCCACCTACTATC
ATGAAGCATTGCAATGTTTTAATCGCTCCACTCAAATAAATCCTTTGAATTTTGAGGGCTGGTACCAGCAAGCCTGTTGT
TTACTTCGTCTTAGTGAAACTTCATTAGAACCTTTTTTTATCGAACAAGCGGATGAATGCTTTGCAAAAGCTTCTGAATT
AGACGCGCTAAATAGTTTGCTATGGCTGAAATGGGGCCAAATGGAAATGCTTTTTGGAAAAGCAACTCGAGATTTAAAGA
AAGTGGAAGAAAGTTTGAATAAATTCCAAAAAGCAAATGACATCGATCCGAATCATCCTCATGTTTTAAGTAGTTGGGCT
GAAACAGAACTCTTTTTAGGAGCTCAGCATGAAAAATTAGATTGGATTCAATCTGCCAAAACAAAAATTACAAAAAGTTT
GGAAATTAATCCTGAGTCTCCAGATGGGTGGTATCTTTACGGCTCTTGTTTAAATGAGTTGGGCCGCTATTTTGGTGAGG
AGGTTTACTATCGTCAAGCAATTGAAAAATTTCAGTATGGTTTGTCCCTGACACGACAAAACCCACTTCTTTGGTATGGA
CTCGCTCTGGCCCACTTTGCGATTGGAGAGTTGAGTGAAGATCAATTATTTTTTGAAAAGGCAGTTCATTACTGTTCCCG
TGTTATCGAGTGTGGCGGAGGAGTTTTTGCTCAATTTTGGAATGACTGGGGCGTCTCTCTCATGAAATTAGCAGAAATGA
CAGGCCAACGACATTTAGTCGAACAAGCAATTGAAAAATTTGAACGAGCACTTAAACAGCCTCTCGTTGATCTCGACATG
ACTGATTTAGATTTAGAATGGGTCTATAACTATGGTTGTGCCTACGATTTATTGGGTGATATCACTGAAGAGCCTCAATA
TTTTGAAAAGTCTATTCAAATTTTATTACAAATTTTAGAACTTGATCCCGATTATGTTCAAGCTCGATACAACCTTGCAA
TGGCTTATTCCCACTTGGGAGAAGCTTTGTGCGATATCGAGCCTTACTTTAAAGCGATTGAACATTTTCAGTTAATCCTT
GAACAAGATTCTGAGGATGAAATCATTCATATGGATTTCGGCGTTTCTCTGATTAATTTAGCGATCTTGGTTCATGACAT
TCATCATATTGAAAAATCTCATGGCTTTTATAGGCAAGCTGAAAGTCATTTAATGCAATCGATTGCATTAGGCAATACGC
AAGCTTATTATCAGATTGCTGGTTTATATTCATTGACAGGGCATTCGCAGCATACCATGCATTATCTTGAGAAAGCGTTA
AATTCCGGAGCTCTTCCTCCGTTGGAAGATTTACTTCATGATGAATGGTTAGAAGGTGTTAGACAAACTCCCGCTTTCAA
ACAATTTATTAATCAACTTTCCAGTCAACATTTTAATGATGACAAATAA

Upstream 100 bases:

>100_bases
TTTAAGAGTTTATAATTAAACGTTTCTATAAAAACCGCAGAATTAGTATAATAGGCTTCTTTAACCATGGCGGATAATGA
CAGCAATTTATAAAAAACTT

Downstream 100 bases:

>100_bases
ATGAGTTTACATTTTTTAAACTTACTAGAAGATAAATGATGCAGCTCATGTTTTTTAAAGTTTTTTCGTGAAAAAACCTT
ACTTTTTATCCTTATTATTA

Product: hypothetical protein

Products: NA

Alternate protein names: O-Linked N-Acetylglucosamine Transferase; Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein; Tetratricopeptide Repeat Family; Peptidase S1 And S6 Chymotrypsin/Hap; Tetratricopeptide Domain-Containing Protein; Tetratricopeptide Repeat Domain Protein

Number of amino acids: Translated: 682; Mature: 682

Protein sequence:

>682_residues
MEIQDAQTFEHLDYFKDSQMWTTMTIDERSLFARLLVLQGASQLAEGNHQVLGNFEIANQVTNYSPAILYQQGLVFAAYP
DNLRCLNYAHQAFDQATQKDSSLFDAWYQGALVLLKIGMFENDFYHLTEAQQKFQKASNMLIENSPVEKEFYWKWGLCLA
VLGRCCGEPNDFYRSVEKYRKAEEVGSASEEFYIDYGHALADLASLLDQSTYYHEALQCFNRSTQINPLNFEGWYQQACC
LLRLSETSLEPFFIEQADECFAKASELDALNSLLWLKWGQMEMLFGKATRDLKKVEESLNKFQKANDIDPNHPHVLSSWA
ETELFLGAQHEKLDWIQSAKTKITKSLEINPESPDGWYLYGSCLNELGRYFGEEVYYRQAIEKFQYGLSLTRQNPLLWYG
LALAHFAIGELSEDQLFFEKAVHYCSRVIECGGGVFAQFWNDWGVSLMKLAEMTGQRHLVEQAIEKFERALKQPLVDLDM
TDLDLEWVYNYGCAYDLLGDITEEPQYFEKSIQILLQILELDPDYVQARYNLAMAYSHLGEALCDIEPYFKAIEHFQLIL
EQDSEDEIIHMDFGVSLINLAILVHDIHHIEKSHGFYRQAESHLMQSIALGNTQAYYQIAGLYSLTGHSQHTMHYLEKAL
NSGALPPLEDLLHDEWLEGVRQTPAFKQFINQLSSQHFNDDK

Sequences:

>Translated_682_residues
MEIQDAQTFEHLDYFKDSQMWTTMTIDERSLFARLLVLQGASQLAEGNHQVLGNFEIANQVTNYSPAILYQQGLVFAAYP
DNLRCLNYAHQAFDQATQKDSSLFDAWYQGALVLLKIGMFENDFYHLTEAQQKFQKASNMLIENSPVEKEFYWKWGLCLA
VLGRCCGEPNDFYRSVEKYRKAEEVGSASEEFYIDYGHALADLASLLDQSTYYHEALQCFNRSTQINPLNFEGWYQQACC
LLRLSETSLEPFFIEQADECFAKASELDALNSLLWLKWGQMEMLFGKATRDLKKVEESLNKFQKANDIDPNHPHVLSSWA
ETELFLGAQHEKLDWIQSAKTKITKSLEINPESPDGWYLYGSCLNELGRYFGEEVYYRQAIEKFQYGLSLTRQNPLLWYG
LALAHFAIGELSEDQLFFEKAVHYCSRVIECGGGVFAQFWNDWGVSLMKLAEMTGQRHLVEQAIEKFERALKQPLVDLDM
TDLDLEWVYNYGCAYDLLGDITEEPQYFEKSIQILLQILELDPDYVQARYNLAMAYSHLGEALCDIEPYFKAIEHFQLIL
EQDSEDEIIHMDFGVSLINLAILVHDIHHIEKSHGFYRQAESHLMQSIALGNTQAYYQIAGLYSLTGHSQHTMHYLEKAL
NSGALPPLEDLLHDEWLEGVRQTPAFKQFINQLSSQHFNDDK
>Mature_682_residues
MEIQDAQTFEHLDYFKDSQMWTTMTIDERSLFARLLVLQGASQLAEGNHQVLGNFEIANQVTNYSPAILYQQGLVFAAYP
DNLRCLNYAHQAFDQATQKDSSLFDAWYQGALVLLKIGMFENDFYHLTEAQQKFQKASNMLIENSPVEKEFYWKWGLCLA
VLGRCCGEPNDFYRSVEKYRKAEEVGSASEEFYIDYGHALADLASLLDQSTYYHEALQCFNRSTQINPLNFEGWYQQACC
LLRLSETSLEPFFIEQADECFAKASELDALNSLLWLKWGQMEMLFGKATRDLKKVEESLNKFQKANDIDPNHPHVLSSWA
ETELFLGAQHEKLDWIQSAKTKITKSLEINPESPDGWYLYGSCLNELGRYFGEEVYYRQAIEKFQYGLSLTRQNPLLWYG
LALAHFAIGELSEDQLFFEKAVHYCSRVIECGGGVFAQFWNDWGVSLMKLAEMTGQRHLVEQAIEKFERALKQPLVDLDM
TDLDLEWVYNYGCAYDLLGDITEEPQYFEKSIQILLQILELDPDYVQARYNLAMAYSHLGEALCDIEPYFKAIEHFQLIL
EQDSEDEIIHMDFGVSLINLAILVHDIHHIEKSHGFYRQAESHLMQSIALGNTQAYYQIAGLYSLTGHSQHTMHYLEKAL
NSGALPPLEDLLHDEWLEGVRQTPAFKQFINQLSSQHFNDDK

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 78767; Mature: 78767

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIQDAQTFEHLDYFKDSQMWTTMTIDERSLFARLLVLQGASQLAEGNHQVLGNFEIANQ
CCCCHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHCHHHHHCCCCEEEECHHHHHH
VTNYSPAILYQQGLVFAAYPDNLRCLNYAHQAFDQATQKDSSLFDAWYQGALVLLKIGMF
HCCCCCHHEEECCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ENDFYHLTEAQQKFQKASNMLIENSPVEKEFYWKWGLCLAVLGRCCGEPNDFYRSVEKYR
CCCHHHHHHHHHHHHHHHCCEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
KAEEVGSASEEFYIDYGHALADLASLLDQSTYYHEALQCFNRSTQINPLNFEGWYQQACC
HHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
LLRLSETSLEPFFIEQADECFAKASELDALNSLLWLKWGQMEMLFGKATRDLKKVEESLN
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
KFQKANDIDPNHPHVLSSWAETELFLGAQHEKLDWIQSAKTKITKSLEINPESPDGWYLY
HHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCEECCCCCCCCCEEH
GSCLNELGRYFGEEVYYRQAIEKFQYGLSLTRQNPLLWYGLALAHFAIGELSEDQLFFEK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHH
AVHYCSRVIECGGGVFAQFWNDWGVSLMKLAEMTGQRHLVEQAIEKFERALKQPLVDLDM
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
TDLDLEWVYNYGCAYDLLGDITEEPQYFEKSIQILLQILELDPDYVQARYNLAMAYSHLG
CCCCHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
EALCDIEPYFKAIEHFQLILEQDSEDEIIHMDFGVSLINLAILVHDIHHIEKSHGFYRQA
HHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCHHHHH
ESHLMQSIALGNTQAYYQIAGLYSLTGHSQHTMHYLEKALNSGALPPLEDLLHDEWLEGV
HHHHHHHHHCCCCHHHHEEHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
RQTPAFKQFINQLSSQHFNDDK
HCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MEIQDAQTFEHLDYFKDSQMWTTMTIDERSLFARLLVLQGASQLAEGNHQVLGNFEIANQ
CCCCHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHCHHHHHCCCCEEEECHHHHHH
VTNYSPAILYQQGLVFAAYPDNLRCLNYAHQAFDQATQKDSSLFDAWYQGALVLLKIGMF
HCCCCCHHEEECCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ENDFYHLTEAQQKFQKASNMLIENSPVEKEFYWKWGLCLAVLGRCCGEPNDFYRSVEKYR
CCCHHHHHHHHHHHHHHHCCEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
KAEEVGSASEEFYIDYGHALADLASLLDQSTYYHEALQCFNRSTQINPLNFEGWYQQACC
HHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
LLRLSETSLEPFFIEQADECFAKASELDALNSLLWLKWGQMEMLFGKATRDLKKVEESLN
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
KFQKANDIDPNHPHVLSSWAETELFLGAQHEKLDWIQSAKTKITKSLEINPESPDGWYLY
HHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCEECCCCCCCCCEEH
GSCLNELGRYFGEEVYYRQAIEKFQYGLSLTRQNPLLWYGLALAHFAIGELSEDQLFFEK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHH
AVHYCSRVIECGGGVFAQFWNDWGVSLMKLAEMTGQRHLVEQAIEKFERALKQPLVDLDM
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
TDLDLEWVYNYGCAYDLLGDITEEPQYFEKSIQILLQILELDPDYVQARYNLAMAYSHLG
CCCCHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
EALCDIEPYFKAIEHFQLILEQDSEDEIIHMDFGVSLINLAILVHDIHHIEKSHGFYRQA
HHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCHHHHH
ESHLMQSIALGNTQAYYQIAGLYSLTGHSQHTMHYLEKALNSGALPPLEDLLHDEWLEGV
HHHHHHHHHCCCCHHHHEEHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
RQTPAFKQFINQLSSQHFNDDK
HCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA