Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446739

Identifier: 46446739

GI number: 46446739

Start: 1324524

End: 1325027

Strand: Reverse

Name: 46446739

Synonym: pc1105

Alternate gene names: NA

Gene position: 1325027-1324524 (Counterclockwise)

Preceding gene: 46446741

Following gene: 46446738

Centisome position: 54.88

GC content: 38.69

Gene sequence:

>504_bases
ATGTCGTTTGAAAATGCAAAAGAAAATCTTAAAGAATTCGGGAAAGAACTTGGCTTAGAGGGATTAGAATTTGATGAAAA
TAATACGTGTATTTTGGGAATCGATGATGAGTTTTCGCTACACTTAACTTATGAGCCAAATTCTAAACGTCTATACCTTT
ACTCCCCTCTTCTTGATGGTCTCCCAAGAGATGAAAAAACGAAATTAAGGCTATATGAGCGTTTATTAGAAGGTTCTATG
CTAGGTGGTCAAATGGCTGGTGGTGGAGTTGGAGTAGCAGTAAAAGAAGAACTCATTCTTATGCACTGCACATTGGATAT
GGAACATGCAGTTTCTTCTGCATTAAGAGCTTTTGCTCCCCTTTATGTTGAAACAGTCGAAAAATGGCGCAAAATTTGTA
GCGAAGTTTCTGAAGGTCGTGATGAGGGTGCAAATGCTTCCAAATCCCTCCCTCCACAAATTACAGGTGGCGGAAAACAA
GGTCAAGGATTTATCAAGATTTAA

Upstream 100 bases:

>100_bases
AATGGTTGTGAATTTAATATAATAAAGAGTCAAAATAGTAAGTTAAAATTAGATAACCCGTAGAAAAAATCGGTGTGTTA
TCTAACCTGAGGAGGTTATT

Downstream 100 bases:

>100_bases
TCCTAAAAAGGGGTACTTACTCCAAATGACATGAAACCTCGAGGAGTTGCTATTAACTATTTAGTTAAAAGCAGCTCTTT
TTTTTAGAAGGGTTTACTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 167; Mature: 166

Protein sequence:

>167_residues
MSFENAKENLKEFGKELGLEGLEFDENNTCILGIDDEFSLHLTYEPNSKRLYLYSPLLDGLPRDEKTKLRLYERLLEGSM
LGGQMAGGGVGVAVKEELILMHCTLDMEHAVSSALRAFAPLYVETVEKWRKICSEVSEGRDEGANASKSLPPQITGGGKQ
GQGFIKI

Sequences:

>Translated_167_residues
MSFENAKENLKEFGKELGLEGLEFDENNTCILGIDDEFSLHLTYEPNSKRLYLYSPLLDGLPRDEKTKLRLYERLLEGSM
LGGQMAGGGVGVAVKEELILMHCTLDMEHAVSSALRAFAPLYVETVEKWRKICSEVSEGRDEGANASKSLPPQITGGGKQ
GQGFIKI
>Mature_166_residues
SFENAKENLKEFGKELGLEGLEFDENNTCILGIDDEFSLHLTYEPNSKRLYLYSPLLDGLPRDEKTKLRLYERLLEGSML
GGQMAGGGVGVAVKEELILMHCTLDMEHAVSSALRAFAPLYVETVEKWRKICSEVSEGRDEGANASKSLPPQITGGGKQG
QGFIKI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18456; Mature: 18325

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFENAKENLKEFGKELGLEGLEFDENNTCILGIDDEFSLHLTYEPNSKRLYLYSPLLDG
CCCCHHHHHHHHHHHHHCCCCCEECCCCEEEEEECCCEEEEEEECCCCCEEEEECCHHCC
LPRDEKTKLRLYERLLEGSMLGGQMAGGGVGVAVKEELILMHCTLDMEHAVSSALRAFAP
CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHCEEEEEECCCHHHHHHHHHHHHHH
LYVETVEKWRKICSEVSEGRDEGANASKSLPPQITGGGKQGQGFIKI
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC
>Mature Secondary Structure 
SFENAKENLKEFGKELGLEGLEFDENNTCILGIDDEFSLHLTYEPNSKRLYLYSPLLDG
CCCHHHHHHHHHHHHHCCCCCEECCCCEEEEEECCCEEEEEEECCCCCEEEEECCHHCC
LPRDEKTKLRLYERLLEGSMLGGQMAGGGVGVAVKEELILMHCTLDMEHAVSSALRAFAP
CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHCEEEEEECCCHHHHHHHHHHHHHH
LYVETVEKWRKICSEVSEGRDEGANASKSLPPQITGGGKQGQGFIKI
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA