| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446735
Identifier: 46446735
GI number: 46446735
Start: 1320367
End: 1320621
Strand: Reverse
Name: 46446735
Synonym: pc1101
Alternate gene names: NA
Gene position: 1320621-1320367 (Counterclockwise)
Preceding gene: 46446736
Following gene: 46446734
Centisome position: 54.7
GC content: 36.86
Gene sequence:
>255_bases ATGAGCTCATTCAGGAGGTGTATGATGGTTGTCAAAAATTTTGTTCAGGCATCGACAGAAAATAAACAGATCACAAAACT TACTTCCAAAAATGAAATAGGTATAGAAGCGACTATTGAAGAACAAGTGAATGAAGTTTTGGAAATAAAAGGACAAGATG CTTCAAAAAATCTTTCTAGATCCCATCGCATTCAAACAGCTGAAGGATGGAAAAGAGAGCAACTTCGCCGACGATTAGAA AAGCGAAAGGTCTGA
Upstream 100 bases:
>100_bases GTAAGTGGAAAACAGGAGTCAGAAAAATTTAAGAAAGAGGAATTAGAAAGCTAATTAATTTTTTTATCTGACTCTCCTTC AACAATCGTCCATCAGTAAG
Downstream 100 bases:
>100_bases GGTTGAAAGTTTTTCTCTAATGAGCTATCCTTACTCTTCTTAATTTGTTAACAGATCAGCTATTGTAAATTTATAGATAG CGTAGAGTAAGGATCTCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 84; Mature: 83
Protein sequence:
>84_residues MSSFRRCMMVVKNFVQASTENKQITKLTSKNEIGIEATIEEQVNEVLEIKGQDASKNLSRSHRIQTAEGWKREQLRRRLE KRKV
Sequences:
>Translated_84_residues MSSFRRCMMVVKNFVQASTENKQITKLTSKNEIGIEATIEEQVNEVLEIKGQDASKNLSRSHRIQTAEGWKREQLRRRLE KRKV >Mature_83_residues SSFRRCMMVVKNFVQASTENKQITKLTSKNEIGIEATIEEQVNEVLEIKGQDASKNLSRSHRIQTAEGWKREQLRRRLEK RKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9848; Mature: 9716
Theoretical pI: Translated: 10.86; Mature: 10.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSFRRCMMVVKNFVQASTENKQITKLTSKNEIGIEATIEEQVNEVLEIKGQDASKNLSR CCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHH SHRIQTAEGWKREQLRRRLEKRKV HHCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure SSFRRCMMVVKNFVQASTENKQITKLTSKNEIGIEATIEEQVNEVLEIKGQDASKNLSR CHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHH SHRIQTAEGWKREQLRRRLEKRKV HHCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA