Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446729

Identifier: 46446729

GI number: 46446729

Start: 1313892

End: 1314359

Strand: Direct

Name: 46446729

Synonym: pc1095

Alternate gene names: NA

Gene position: 1313892-1314359 (Clockwise)

Preceding gene: 46446728

Following gene: 46446730

Centisome position: 54.42

GC content: 39.74

Gene sequence:

>468_bases
ATGAAACATATCAAAAGTGAAAGATTAAAAAAACTCGAGACAGAGCTTAATGATCTCGAACAATGGTTAAAACTTGGACT
AGTTCCCAAAAAAGATGTAGATAAACACAAAGAAGAAATTTTAGCTGTTAGGACAAAAATCGAAGAAGAAAAAGAAAGGC
TGCAATTTCTTAAAGAAAGTGGAGAAGCGGAAGAATATATCACTCCCAAGCGAATCCCTGGTCGAGCCGGTTACAATGAT
ATGCCTACAATCCCAGATATTGACATTGGGGAAACGATGGGTGGAAATGAAACTGGCTTCGATATGGAAACAGATGCCAT
TGAAGTTGAAAATACAATTGGCGCAAGGGAAGATGATGAAGATGGCGAAAATGAGGAAGAGGATGATGAAGATGACGAAT
CCTATTTCAGTGATCGCAATCGATGGCGGCGTGGAGGAATCGTAGACCCAGATGCTAACGATTGGTAA

Upstream 100 bases:

>100_bases
ACGTCATTTCGTTATCTGCATAAATTGGTTTTTTTGAGATTAATGGCTATCTCTTTAAACAATGTGGAAACGTGGACAGA
TTTTAATTAATGGAAGTATC

Downstream 100 bases:

>100_bases
CCCCACTTCATCGGAAATCAGTCTTTATTTTCATATCCCTTTTTGTACAAAAAAGTGTAATTACTGCCACTTTTATGTCC
TTCCTGATCAAGAGCCTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MKHIKSERLKKLETELNDLEQWLKLGLVPKKDVDKHKEEILAVRTKIEEEKERLQFLKESGEAEEYITPKRIPGRAGYND
MPTIPDIDIGETMGGNETGFDMETDAIEVENTIGAREDDEDGENEEEDDEDDESYFSDRNRWRRGGIVDPDANDW

Sequences:

>Translated_155_residues
MKHIKSERLKKLETELNDLEQWLKLGLVPKKDVDKHKEEILAVRTKIEEEKERLQFLKESGEAEEYITPKRIPGRAGYND
MPTIPDIDIGETMGGNETGFDMETDAIEVENTIGAREDDEDGENEEEDDEDDESYFSDRNRWRRGGIVDPDANDW
>Mature_155_residues
MKHIKSERLKKLETELNDLEQWLKLGLVPKKDVDKHKEEILAVRTKIEEEKERLQFLKESGEAEEYITPKRIPGRAGYND
MPTIPDIDIGETMGGNETGFDMETDAIEVENTIGAREDDEDGENEEEDDEDDESYFSDRNRWRRGGIVDPDANDW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17986; Mature: 17986

Theoretical pI: Translated: 4.10; Mature: 4.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHIKSERLKKLETELNDLEQWLKLGLVPKKDVDKHKEEILAVRTKIEEEKERLQFLKES
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GEAEEYITPKRIPGRAGYNDMPTIPDIDIGETMGGNETGFDMETDAIEVENTIGAREDDE
CCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCC
DGENEEEDDEDDESYFSDRNRWRRGGIVDPDANDW
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MKHIKSERLKKLETELNDLEQWLKLGLVPKKDVDKHKEEILAVRTKIEEEKERLQFLKES
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GEAEEYITPKRIPGRAGYNDMPTIPDIDIGETMGGNETGFDMETDAIEVENTIGAREDDE
CCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCC
DGENEEEDDEDDESYFSDRNRWRRGGIVDPDANDW
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA