| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446729
Identifier: 46446729
GI number: 46446729
Start: 1313892
End: 1314359
Strand: Direct
Name: 46446729
Synonym: pc1095
Alternate gene names: NA
Gene position: 1313892-1314359 (Clockwise)
Preceding gene: 46446728
Following gene: 46446730
Centisome position: 54.42
GC content: 39.74
Gene sequence:
>468_bases ATGAAACATATCAAAAGTGAAAGATTAAAAAAACTCGAGACAGAGCTTAATGATCTCGAACAATGGTTAAAACTTGGACT AGTTCCCAAAAAAGATGTAGATAAACACAAAGAAGAAATTTTAGCTGTTAGGACAAAAATCGAAGAAGAAAAAGAAAGGC TGCAATTTCTTAAAGAAAGTGGAGAAGCGGAAGAATATATCACTCCCAAGCGAATCCCTGGTCGAGCCGGTTACAATGAT ATGCCTACAATCCCAGATATTGACATTGGGGAAACGATGGGTGGAAATGAAACTGGCTTCGATATGGAAACAGATGCCAT TGAAGTTGAAAATACAATTGGCGCAAGGGAAGATGATGAAGATGGCGAAAATGAGGAAGAGGATGATGAAGATGACGAAT CCTATTTCAGTGATCGCAATCGATGGCGGCGTGGAGGAATCGTAGACCCAGATGCTAACGATTGGTAA
Upstream 100 bases:
>100_bases ACGTCATTTCGTTATCTGCATAAATTGGTTTTTTTGAGATTAATGGCTATCTCTTTAAACAATGTGGAAACGTGGACAGA TTTTAATTAATGGAAGTATC
Downstream 100 bases:
>100_bases CCCCACTTCATCGGAAATCAGTCTTTATTTTCATATCCCTTTTTGTACAAAAAAGTGTAATTACTGCCACTTTTATGTCC TTCCTGATCAAGAGCCTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MKHIKSERLKKLETELNDLEQWLKLGLVPKKDVDKHKEEILAVRTKIEEEKERLQFLKESGEAEEYITPKRIPGRAGYND MPTIPDIDIGETMGGNETGFDMETDAIEVENTIGAREDDEDGENEEEDDEDDESYFSDRNRWRRGGIVDPDANDW
Sequences:
>Translated_155_residues MKHIKSERLKKLETELNDLEQWLKLGLVPKKDVDKHKEEILAVRTKIEEEKERLQFLKESGEAEEYITPKRIPGRAGYND MPTIPDIDIGETMGGNETGFDMETDAIEVENTIGAREDDEDGENEEEDDEDDESYFSDRNRWRRGGIVDPDANDW >Mature_155_residues MKHIKSERLKKLETELNDLEQWLKLGLVPKKDVDKHKEEILAVRTKIEEEKERLQFLKESGEAEEYITPKRIPGRAGYND MPTIPDIDIGETMGGNETGFDMETDAIEVENTIGAREDDEDGENEEEDDEDDESYFSDRNRWRRGGIVDPDANDW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17986; Mature: 17986
Theoretical pI: Translated: 4.10; Mature: 4.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHIKSERLKKLETELNDLEQWLKLGLVPKKDVDKHKEEILAVRTKIEEEKERLQFLKES CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GEAEEYITPKRIPGRAGYNDMPTIPDIDIGETMGGNETGFDMETDAIEVENTIGAREDDE CCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCC DGENEEEDDEDDESYFSDRNRWRRGGIVDPDANDW CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MKHIKSERLKKLETELNDLEQWLKLGLVPKKDVDKHKEEILAVRTKIEEEKERLQFLKES CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GEAEEYITPKRIPGRAGYNDMPTIPDIDIGETMGGNETGFDMETDAIEVENTIGAREDDE CCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCC DGENEEEDDEDDESYFSDRNRWRRGGIVDPDANDW CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA