Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446721

Identifier: 46446721

GI number: 46446721

Start: 1301057

End: 1302202

Strand: Direct

Name: 46446721

Synonym: pc1087

Alternate gene names: NA

Gene position: 1301057-1302202 (Clockwise)

Preceding gene: 46446720

Following gene: 46446725

Centisome position: 53.89

GC content: 31.59

Gene sequence:

>1146_bases
TTGCGAACCAGGACTGGTTTTTTTAAAAATAAAAGTTTAAAATTAAGTGAACCAATAATTTACCAATTAAGAGGTATTAT
TATGATTCCCAAGCCAAAAGATTATTTTTTTACTCCAACTGATTTACAAGGAACTATAGACACTTTTTTAAGACCTAATG
CAATTCTTACTCAACAAAGACAACGACAACTAGAATTAGTTCTGGAAAATTTTTTCTTAAAAAAAGACCAAGAAAATCTT
ACTCAGCAATTGACAGATATCAAGTGCAATATAACTGGTAAGCAAATTGAAAATGAGGAATTGAAAAACAAAAGTCAGCA
GGAATTACAACAAATCATAAAAATAAGCGAGAAGTTATTAGCTGCGTGTAAAAAGGAGTGCGAAGATCATGCGCAGTTTA
AAAAAGAAGCAGATCAAAAAGTAGCTTCTATCTCTCAATCTTTTGCCAAGTTACGCGAAAATGATGCTAAACAACTTCAT
GAACTCAAAAGAATGCATCAGCAATGTGATGACTTACAGTTATCTCATAAGCAGGATATGCAATTACTTGGTCAACTCAA
TGAACAGGTCCAAAAAATAAAAGAATCTTTTCACTTTCTTGGACAAGAATATAAGCAACACTTCAAAGACTTTCAAGTTC
TTAAGCAACAATTTGGCCAAATTCGCAAAGATTTAGAACTTATTAAAAATCAATTAGACTACATGGGAAAGGATCTTGAA
GACATTAGACAAGATTTTAAACGTTTTAAAGAAGAGATGAACAGCTTAACTCAAGATTTTCGAGTAATTAGAGCCCAAAT
AGAAGAATTGGACCGTCGAGAAGATATTAGCAACAAAGCTATTGCGGATCGATTAGAAAAAATGCAAGTCGCATTTGATC
AACTTGCAGCTCAGATGAATAAGGATAAATTTGTACAGTCAACAAGTCTACCTCAAATTTCAGAGAGTTCTTTTGATAGA
TCAAATTCAAAAAATATTTTAACTTTTAGTTTTTTTCGGTCTCTATTTAAATGGAATATCTTCAAGATAATTTGTTTAAA
TCACTTTAATCATCACCATTTATTTCGTCGTACTTCGAATATCTGGACTTCGAATATCTGGGCAAGAAAAATCCCAATAC
CAGTTGATTCTAAAGAACTGGGTTAA

Upstream 100 bases:

>100_bases
CTGAGACCCTTAATGCTTTAAGTTTTATACTTGGTATAGTTGGCGGTGGTATAACAGTATTAGGTTATTTGCGAAAATAA
TTCAATTAGGAAAAACCAAC

Downstream 100 bases:

>100_bases
CTATTTAGTAATAACTAATGCCAAGGTGGAACACCTTGGCTGTTTTTTTATACAACTATAAAACTTCTTAAAAAAACCTT
AATTTTCAAAGTCCGTCATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MRTRTGFFKNKSLKLSEPIIYQLRGIIMIPKPKDYFFTPTDLQGTIDTFLRPNAILTQQRQRQLELVLENFFLKKDQENL
TQQLTDIKCNITGKQIENEELKNKSQQELQQIIKISEKLLAACKKECEDHAQFKKEADQKVASISQSFAKLRENDAKQLH
ELKRMHQQCDDLQLSHKQDMQLLGQLNEQVQKIKESFHFLGQEYKQHFKDFQVLKQQFGQIRKDLELIKNQLDYMGKDLE
DIRQDFKRFKEEMNSLTQDFRVIRAQIEELDRREDISNKAIADRLEKMQVAFDQLAAQMNKDKFVQSTSLPQISESSFDR
SNSKNILTFSFFRSLFKWNIFKIICLNHFNHHHLFRRTSNIWTSNIWARKIPIPVDSKELG

Sequences:

>Translated_381_residues
MRTRTGFFKNKSLKLSEPIIYQLRGIIMIPKPKDYFFTPTDLQGTIDTFLRPNAILTQQRQRQLELVLENFFLKKDQENL
TQQLTDIKCNITGKQIENEELKNKSQQELQQIIKISEKLLAACKKECEDHAQFKKEADQKVASISQSFAKLRENDAKQLH
ELKRMHQQCDDLQLSHKQDMQLLGQLNEQVQKIKESFHFLGQEYKQHFKDFQVLKQQFGQIRKDLELIKNQLDYMGKDLE
DIRQDFKRFKEEMNSLTQDFRVIRAQIEELDRREDISNKAIADRLEKMQVAFDQLAAQMNKDKFVQSTSLPQISESSFDR
SNSKNILTFSFFRSLFKWNIFKIICLNHFNHHHLFRRTSNIWTSNIWARKIPIPVDSKELG
>Mature_381_residues
MRTRTGFFKNKSLKLSEPIIYQLRGIIMIPKPKDYFFTPTDLQGTIDTFLRPNAILTQQRQRQLELVLENFFLKKDQENL
TQQLTDIKCNITGKQIENEELKNKSQQELQQIIKISEKLLAACKKECEDHAQFKKEADQKVASISQSFAKLRENDAKQLH
ELKRMHQQCDDLQLSHKQDMQLLGQLNEQVQKIKESFHFLGQEYKQHFKDFQVLKQQFGQIRKDLELIKNQLDYMGKDLE
DIRQDFKRFKEEMNSLTQDFRVIRAQIEELDRREDISNKAIADRLEKMQVAFDQLAAQMNKDKFVQSTSLPQISESSFDR
SNSKNILTFSFFRSLFKWNIFKIICLNHFNHHHLFRRTSNIWTSNIWARKIPIPVDSKELG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45278; Mature: 45278

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTRTGFFKNKSLKLSEPIIYQLRGIIMIPKPKDYFFTPTDLQGTIDTFLRPNAILTQQR
CCCCCCCCCCCCCCCCCHHHHHHCCCEECCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHH
QRQLELVLENFFLKKDQENLTQQLTDIKCNITGKQIENEELKNKSQQELQQIIKISEKLL
HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHH
AACKKECEDHAQFKKEADQKVASISQSFAKLRENDAKQLHELKRMHQQCDDLQLSHKQDM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLLGQLNEQVQKIKESFHFLGQEYKQHFKDFQVLKQQFGQIRKDLELIKNQLDYMGKDLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
DIRQDFKRFKEEMNSLTQDFRVIRAQIEELDRREDISNKAIADRLEKMQVAFDQLAAQMN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
KDKFVQSTSLPQISESSFDRSNSKNILTFSFFRSLFKWNIFKIICLNHFNHHHLFRRTSN
HHHHHHHCCCCCCCHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
IWTSNIWARKIPIPVDSKELG
HHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRTRTGFFKNKSLKLSEPIIYQLRGIIMIPKPKDYFFTPTDLQGTIDTFLRPNAILTQQR
CCCCCCCCCCCCCCCCCHHHHHHCCCEECCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHH
QRQLELVLENFFLKKDQENLTQQLTDIKCNITGKQIENEELKNKSQQELQQIIKISEKLL
HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHH
AACKKECEDHAQFKKEADQKVASISQSFAKLRENDAKQLHELKRMHQQCDDLQLSHKQDM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLLGQLNEQVQKIKESFHFLGQEYKQHFKDFQVLKQQFGQIRKDLELIKNQLDYMGKDLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
DIRQDFKRFKEEMNSLTQDFRVIRAQIEELDRREDISNKAIADRLEKMQVAFDQLAAQMN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
KDKFVQSTSLPQISESSFDRSNSKNILTFSFFRSLFKWNIFKIICLNHFNHHHLFRRTSN
HHHHHHHCCCCCCCHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
IWTSNIWARKIPIPVDSKELG
HHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA