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The map label for this gene is yidC [H]

Identifier: 46446715

GI number: 46446715

Start: 1292774

End: 1295374

Strand: Direct

Name: yidC [H]

Synonym: pc1081

Alternate gene names: 46446715

Gene position: 1292774-1295374 (Clockwise)

Preceding gene: 46446700

Following gene: 46446716

Centisome position: 53.54

GC content: 35.41

Gene sequence:

>2601_bases
TTGTCTCTTTCAGTCAGGTATGCTAACCTCCTCCTTTTAAACTTTCGTTTTACAATTTTATTTAAAAAATTTACAGGTTA
TTTGTTCATGGATAAACGCACCACCTTGTTCGTGATAGCTCTTTCTTTAACGTTATTTGGAATGAATCTTTTCTTTCAGC
ATCAAAATACTCAGCAAAAGCAAGAATGGGTTACACAGCAACAAGCCAAACAAATTCAAAAAAGTAAAAAATTAGAAGAA
GAAATCAAATCACGGACAGCTAATTCTGAGTCCTTTTCTTTAACAACTATTTATGATGGAGAGCAAAAAGAAGCGATTGC
ACGTGGATTAGTGAAAGATAATTACCTTTTAACTTTCCGCTGGAGTGAAAATCTTCCGACGGAAATTTACATTCGTACTA
GTCCCTCGAATGAAATGCAAGCTTATGAATTAATCTATAATGAATCGGAACAACAAACTCCTGCTATTTATAAAACAAAG
TCAAGCTCAAGTTTTTTACCCATTGCAAACATTCCCGATTTTGGACGTTATGATTTACAACTCGTTTCATTTAATTCTTC
TGATAGTCAATATCCTGCACACATTGCACTTGGAGAGTATACAGATGGACACCTTTCTATTTTAAATCCGCAAAATTTAC
AGATTGATAAAGAAAATAAAAATTCTCAACAAAATTACTATGCCGCAATTGCTTTATTAAAAACTTCTCAAGGCTATTTA
CCAGTTGGATTTTATGATTTCACTAGTCAATCACTTGTTCGCTTTAATAAAATACAAGAATTGTCTTCCTTTATCGCTCC
GACTCAAGACACTCAAATCAATTCTGCAACCAATGGTAAAAGAGAACAAAAATTTTATGTCTTAGAAAATAATTACCAAC
AATTAGTTTTCTCAAACTATGGAGGGGCACTAGCAGAGATTAATCTTCCTTTTAGAACAGACGAAAATCAAGCAAGTGTT
GTCAGAGAAATTGAATTTGATCGCAATATGGTTAAACATCACCCTTATAACGCCTTGTTCCCTAGCCACGCTTATTATAC
TCACGCAAAAGATCAAGGAAAAGATTTTATTTTTCATGAAAAAGGACAATTAGGAGGATACTATCCCCTACTTAGACGCG
ATCTTATCCAAATTTCTCCTCGAAAAAGTGTTCAAATTAAACCTCAACACTATGCTTTGAATATTGTATCTGAATATCCA
GAATTAGCTGAGCTTATCTACGAAGTTATTCATTTTGACAATCGATCCATTACTTTTGAAGCTGTCCAAAATCAACGTCG
CATTACTAAAACTTATTCTTTTGGTGATTCCTTACAAGAAGGGCCTTATTGCCTTAATCTTGCCCTTCAAATTGATGGGG
ATTCGAGAGGTTTATGGTTAACGTCAGGGGTTCCAGAGGTAGAATGGATTTCTGGTGGACCTGCCCCCTCTTTAAAATAT
CGCATCACTCGTAACCAAAAATCTGAAGTGGAAAAGATTGATCTACCTAAAGATGCGTCAACAATCACTTCCATCTATCC
TGATTGGATTTGCAATTCGAATGGATTTTTAGGAATGATTTTAGATCCTCTCAAAGAAATCGATCCCGGATTTAAAATTC
AAGCAATTTCAGGAACAAATGTCCCATCTCGATTAATAGAAATTGATCAAGAATACAACCTTTATCAAGCTGCTAATTTA
CCGGGCTACATGGCTTATCTTCCCTTGAAATCTCAAGGTGGATTGATGAATTTCCGGTTTTTTGCAGGGCCATTTGATGA
TGAAACTTTAAAAACGATCGATGCTAAATATTCCAATTCTGAAACAGGTTATAACCCCGACTATATTGCTTGTCAAACAA
TGCACGGATGGTTCACTTTTATTTCTGAACCGTTTGCCAAGTTTCTTCTAATTTTAATGAAATTTTTTCATTATTTAACG
AACTCTTGGGCACTATCCATTGTTCTCCTTACGGTTAGCTTGCGTTTGATGCTCTATCCATTGAATACTTGGTCCACTAA
ATCTATGGTTCGCATGCAACAAATAGCACCACAAGTTACTGCTATTCAAGAAAAATATAAGAAAGATCCCAAAAAAGCTC
AATTAGAAATCATGTCTCTTTATCGAGAAAGAGGAGTCAACCCAGCTTCTGGATGCTTACCTCTTTTGATTCAAATGCCT
TTTTTGATTGGAATGTTTGATCTTTTAAAATCTAGTTTCGCTCTTCGCGGTGCTCCATTTATTTCTGGATGGATTGACGA
CTTGACAGCTCCCGATGTTTTATTTAGCTGGAGCAAGCCTATTTTTTTTATTGGAACAGAATTTCATCTGCTGCCCATAT
TGCTAGGTTTAGTCATGTTCCTTCAACAACGTTTTATGTCTTCTGGTCCTAAAGACCTAAGTCAGATGACAGATCAGCAA
AGACAACAACGAGCAATGGGAACCATGATGACAGTCGTTTTTGCTGTCATGTTTTATAACTTCCCATCAGGATTAAATAT
TTATTGGCTTTCTTCTATGTTATTAGGAATGGTACAACAATGGTTTGTATCTAAACAAATACAAAAAACGCCTAACCCTA
TTGCAGTGAAAACTGTTCCTAAAAAAGCTCGGTCTCGTTAG

Upstream 100 bases:

>100_bases
CCCTTCAAATTATTTAAATTTCCTGACCAAATAAGATGGCAGCTAATAAAGAAATGATAAATTTGTGCGACCGTACTAAC
AAAGTAAACTTGAGTTTTTC

Downstream 100 bases:

>100_bases
AACAATTTTAGAGGAAGAATTTTCTTCCTCTAATTAATTTTGAGAGATTGACAAGAGTAAAAACTATGCAAGCATGGGAA
GAATTTCTAAAGGCACAAGA

Product: putative inner membrane protein translocase component YidC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 866; Mature: 865

Protein sequence:

>866_residues
MSLSVRYANLLLLNFRFTILFKKFTGYLFMDKRTTLFVIALSLTLFGMNLFFQHQNTQQKQEWVTQQQAKQIQKSKKLEE
EIKSRTANSESFSLTTIYDGEQKEAIARGLVKDNYLLTFRWSENLPTEIYIRTSPSNEMQAYELIYNESEQQTPAIYKTK
SSSSFLPIANIPDFGRYDLQLVSFNSSDSQYPAHIALGEYTDGHLSILNPQNLQIDKENKNSQQNYYAAIALLKTSQGYL
PVGFYDFTSQSLVRFNKIQELSSFIAPTQDTQINSATNGKREQKFYVLENNYQQLVFSNYGGALAEINLPFRTDENQASV
VREIEFDRNMVKHHPYNALFPSHAYYTHAKDQGKDFIFHEKGQLGGYYPLLRRDLIQISPRKSVQIKPQHYALNIVSEYP
ELAELIYEVIHFDNRSITFEAVQNQRRITKTYSFGDSLQEGPYCLNLALQIDGDSRGLWLTSGVPEVEWISGGPAPSLKY
RITRNQKSEVEKIDLPKDASTITSIYPDWICNSNGFLGMILDPLKEIDPGFKIQAISGTNVPSRLIEIDQEYNLYQAANL
PGYMAYLPLKSQGGLMNFRFFAGPFDDETLKTIDAKYSNSETGYNPDYIACQTMHGWFTFISEPFAKFLLILMKFFHYLT
NSWALSIVLLTVSLRLMLYPLNTWSTKSMVRMQQIAPQVTAIQEKYKKDPKKAQLEIMSLYRERGVNPASGCLPLLIQMP
FLIGMFDLLKSSFALRGAPFISGWIDDLTAPDVLFSWSKPIFFIGTEFHLLPILLGLVMFLQQRFMSSGPKDLSQMTDQQ
RQQRAMGTMMTVVFAVMFYNFPSGLNIYWLSSMLLGMVQQWFVSKQIQKTPNPIAVKTVPKKARSR

Sequences:

>Translated_866_residues
MSLSVRYANLLLLNFRFTILFKKFTGYLFMDKRTTLFVIALSLTLFGMNLFFQHQNTQQKQEWVTQQQAKQIQKSKKLEE
EIKSRTANSESFSLTTIYDGEQKEAIARGLVKDNYLLTFRWSENLPTEIYIRTSPSNEMQAYELIYNESEQQTPAIYKTK
SSSSFLPIANIPDFGRYDLQLVSFNSSDSQYPAHIALGEYTDGHLSILNPQNLQIDKENKNSQQNYYAAIALLKTSQGYL
PVGFYDFTSQSLVRFNKIQELSSFIAPTQDTQINSATNGKREQKFYVLENNYQQLVFSNYGGALAEINLPFRTDENQASV
VREIEFDRNMVKHHPYNALFPSHAYYTHAKDQGKDFIFHEKGQLGGYYPLLRRDLIQISPRKSVQIKPQHYALNIVSEYP
ELAELIYEVIHFDNRSITFEAVQNQRRITKTYSFGDSLQEGPYCLNLALQIDGDSRGLWLTSGVPEVEWISGGPAPSLKY
RITRNQKSEVEKIDLPKDASTITSIYPDWICNSNGFLGMILDPLKEIDPGFKIQAISGTNVPSRLIEIDQEYNLYQAANL
PGYMAYLPLKSQGGLMNFRFFAGPFDDETLKTIDAKYSNSETGYNPDYIACQTMHGWFTFISEPFAKFLLILMKFFHYLT
NSWALSIVLLTVSLRLMLYPLNTWSTKSMVRMQQIAPQVTAIQEKYKKDPKKAQLEIMSLYRERGVNPASGCLPLLIQMP
FLIGMFDLLKSSFALRGAPFISGWIDDLTAPDVLFSWSKPIFFIGTEFHLLPILLGLVMFLQQRFMSSGPKDLSQMTDQQ
RQQRAMGTMMTVVFAVMFYNFPSGLNIYWLSSMLLGMVQQWFVSKQIQKTPNPIAVKTVPKKARSR
>Mature_865_residues
SLSVRYANLLLLNFRFTILFKKFTGYLFMDKRTTLFVIALSLTLFGMNLFFQHQNTQQKQEWVTQQQAKQIQKSKKLEEE
IKSRTANSESFSLTTIYDGEQKEAIARGLVKDNYLLTFRWSENLPTEIYIRTSPSNEMQAYELIYNESEQQTPAIYKTKS
SSSFLPIANIPDFGRYDLQLVSFNSSDSQYPAHIALGEYTDGHLSILNPQNLQIDKENKNSQQNYYAAIALLKTSQGYLP
VGFYDFTSQSLVRFNKIQELSSFIAPTQDTQINSATNGKREQKFYVLENNYQQLVFSNYGGALAEINLPFRTDENQASVV
REIEFDRNMVKHHPYNALFPSHAYYTHAKDQGKDFIFHEKGQLGGYYPLLRRDLIQISPRKSVQIKPQHYALNIVSEYPE
LAELIYEVIHFDNRSITFEAVQNQRRITKTYSFGDSLQEGPYCLNLALQIDGDSRGLWLTSGVPEVEWISGGPAPSLKYR
ITRNQKSEVEKIDLPKDASTITSIYPDWICNSNGFLGMILDPLKEIDPGFKIQAISGTNVPSRLIEIDQEYNLYQAANLP
GYMAYLPLKSQGGLMNFRFFAGPFDDETLKTIDAKYSNSETGYNPDYIACQTMHGWFTFISEPFAKFLLILMKFFHYLTN
SWALSIVLLTVSLRLMLYPLNTWSTKSMVRMQQIAPQVTAIQEKYKKDPKKAQLEIMSLYRERGVNPASGCLPLLIQMPF
LIGMFDLLKSSFALRGAPFISGWIDDLTAPDVLFSWSKPIFFIGTEFHLLPILLGLVMFLQQRFMSSGPKDLSQMTDQQR
QQRAMGTMMTVVFAVMFYNFPSGLNIYWLSSMLLGMVQQWFVSKQIQKTPNPIAVKTVPKKARSR

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790140, Length=305, Percent_Identity=31.1475409836066, Blast_Score=153, Evalue=4e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019998
- InterPro:   IPR001708 [H]

Pfam domain/function: PF02096 60KD_IMP [H]

EC number: NA

Molecular weight: Translated: 99424; Mature: 99293

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSVRYANLLLLNFRFTILFKKFTGYLFMDKRTTLFVIALSLTLFGMNLFFQHQNTQQK
CCCEEEEHEEEEEHHHHHHHEEHHCCEEEECCCCEEHHHHHHHHHHHHHHEEECCCCHHH
QEWVTQQQAKQIQKSKKLEEEIKSRTANSESFSLTTIYDGEQKEAIARGLVKDNYLLTFR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHCCCEEEEEE
WSENLPTEIYIRTSPSNEMQAYELIYNESEQQTPAIYKTKSSSSFLPIANIPDFGRYDLQ
ECCCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCEEEECCCCCCEEECCCCCCCCCEEE
LVSFNSSDSQYPAHIALGEYTDGHLSILNPQNLQIDKENKNSQQNYYAAIALLKTSQGYL
EEEECCCCCCCCEEEEECCCCCCCEEEECCCCCEEECCCCCCCHHEEEEEEEEECCCCCE
PVGFYDFTSQSLVRFNKIQELSSFIAPTQDTQINSATNGKREQKFYVLENNYQQLVFSNY
EEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECC
GGALAEINLPFRTDENQASVVREIEFDRNMVKHHPYNALFPSHAYYTHAKDQGKDFIFHE
CCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCEEEEC
KGQLGGYYPLLRRDLIQISPRKSVQIKPQHYALNIVSEYPELAELIYEVIHFDNRSITFE
CCCCCCCHHHHHHHHHHCCCCCCEEECCCCEEEEHHHCCHHHHHHHHHHHHCCCCCEEHH
AVQNQRRITKTYSFGDSLQEGPYCLNLALQIDGDSRGLWLTSGVPEVEWISGGPAPSLKY
HHHCCHHHHHEECCCCCCCCCCEEEEEEEEEECCCCCEEEECCCCCEEEECCCCCCCEEE
RITRNQKSEVEKIDLPKDASTITSIYPDWICNSNGFLGMILDPLKEIDPGFKIQAISGTN
EEECCCCHHHHHCCCCCCHHHHHHHCCCCEECCCCEEEHHHHHHHHCCCCCEEEEECCCC
VPSRLIEIDQEYNLYQAANLPGYMAYLPLKSQGGLMNFRFFAGPFDDETLKTIDAKYSNS
CCHHHHHHCCCCCEEEECCCCCEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHCCCCCC
ETGYNPDYIACQTMHGWFTFISEPFAKFLLILMKFFHYLTNSWALSIVLLTVSLRLMLYP
CCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEE
LNTWSTKSMVRMQQIAPQVTAIQEKYKKDPKKAQLEIMSLYRERGVNPASGCLPLLIQMP
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
FLIGMFDLLKSSFALRGAPFISGWIDDLTAPDVLFSWSKPIFFIGTEFHLLPILLGLVMF
HHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHEECCCCEEEECCHHHHHHHHHHHHHH
LQQRFMSSGPKDLSQMTDQQRQQRAMGTMMTVVFAVMFYNFPSGLNIYWLSSMLLGMVQQ
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
WFVSKQIQKTPNPIAVKTVPKKARSR
HHHHHHHHCCCCCEEEEECCHHHCCC
>Mature Secondary Structure 
SLSVRYANLLLLNFRFTILFKKFTGYLFMDKRTTLFVIALSLTLFGMNLFFQHQNTQQK
CCEEEEHEEEEEHHHHHHHEEHHCCEEEECCCCEEHHHHHHHHHHHHHHEEECCCCHHH
QEWVTQQQAKQIQKSKKLEEEIKSRTANSESFSLTTIYDGEQKEAIARGLVKDNYLLTFR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHCCCEEEEEE
WSENLPTEIYIRTSPSNEMQAYELIYNESEQQTPAIYKTKSSSSFLPIANIPDFGRYDLQ
ECCCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCEEEECCCCCCEEECCCCCCCCCEEE
LVSFNSSDSQYPAHIALGEYTDGHLSILNPQNLQIDKENKNSQQNYYAAIALLKTSQGYL
EEEECCCCCCCCEEEEECCCCCCCEEEECCCCCEEECCCCCCCHHEEEEEEEEECCCCCE
PVGFYDFTSQSLVRFNKIQELSSFIAPTQDTQINSATNGKREQKFYVLENNYQQLVFSNY
EEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECC
GGALAEINLPFRTDENQASVVREIEFDRNMVKHHPYNALFPSHAYYTHAKDQGKDFIFHE
CCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCEEEEC
KGQLGGYYPLLRRDLIQISPRKSVQIKPQHYALNIVSEYPELAELIYEVIHFDNRSITFE
CCCCCCCHHHHHHHHHHCCCCCCEEECCCCEEEEHHHCCHHHHHHHHHHHHCCCCCEEHH
AVQNQRRITKTYSFGDSLQEGPYCLNLALQIDGDSRGLWLTSGVPEVEWISGGPAPSLKY
HHHCCHHHHHEECCCCCCCCCCEEEEEEEEEECCCCCEEEECCCCCEEEECCCCCCCEEE
RITRNQKSEVEKIDLPKDASTITSIYPDWICNSNGFLGMILDPLKEIDPGFKIQAISGTN
EEECCCCHHHHHCCCCCCHHHHHHHCCCCEECCCCEEEHHHHHHHHCCCCCEEEEECCCC
VPSRLIEIDQEYNLYQAANLPGYMAYLPLKSQGGLMNFRFFAGPFDDETLKTIDAKYSNS
CCHHHHHHCCCCCEEEECCCCCEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHCCCCCC
ETGYNPDYIACQTMHGWFTFISEPFAKFLLILMKFFHYLTNSWALSIVLLTVSLRLMLYP
CCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEE
LNTWSTKSMVRMQQIAPQVTAIQEKYKKDPKKAQLEIMSLYRERGVNPASGCLPLLIQMP
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
FLIGMFDLLKSSFALRGAPFISGWIDDLTAPDVLFSWSKPIFFIGTEFHLLPILLGLVMF
HHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHEECCCCEEEECCHHHHHHHHHHHHHH
LQQRFMSSGPKDLSQMTDQQRQQRAMGTMMTVVFAVMFYNFPSGLNIYWLSSMLLGMVQQ
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
WFVSKQIQKTPNPIAVKTVPKKARSR
HHHHHHHHCCCCCEEEEECCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10684935 [H]