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The map label for this gene is soj [H]

Identifier: 46446669

GI number: 46446669

Start: 1225537

End: 1226133

Strand: Reverse

Name: soj [H]

Synonym: pc1035

Alternate gene names: 46446669

Gene position: 1226133-1225537 (Counterclockwise)

Preceding gene: 46446671

Following gene: 46446668

Centisome position: 50.78

GC content: 31.83

Gene sequence:

>597_bases
TTGGCTATTTTAAATGATAAAATTTCCTTAAAAGACATCATCAAGCCTACTTTGGTAGATAATCTTCAGATCGCTCCTTC
TGGCGAACCAATGATTGATCTCGATTTAAAATTACATTCTTGCCCGATAAGAAGAGAATATAAGCTTAAAGTTGCACTTA
AAAATGATTTAATATCCGAATATGATTTTATTTTAATTGATAACCCACCTCATATTAGTTTTACAACAGTAAATAGCCTT
ATTGCAAGTAACTATTATTTAGTGCCAGTGAGTGCAGAGTACCTTCCACTTGTTGGAATCCGACATCTTATTAAAACAAT
TGAGTTAATTAAGCCATCTAACCCATCCATATCAAATTTAGGATCTTTATTAACAATGGTAAATCGTAGAGAAAGTATTT
CAAGTGACGTTGAAAATATACTGCGAGACACATTTCCTGGAGATATGTTTGAAAACGTCATTAGAGTTAATACGAAGTTG
AAAGCATGTCCACAAAAAAGACAAACTATATTTCAAGCTGAAAATTCAAAAGGAAAGGGTCATTTCGATTATTTAAATGC
GACAAAAGAACTTTTGCATAGACTGGAGAAAGCTTAA

Upstream 100 bases:

>100_bases
TAAATAGGTAAGGCTCTCAATTGTCTATCGTAATCACAAATAAAGTATTTTATTAACCCAATGTGTTTAGTTAGTTTTTT
AGAAAATGAAAGTGTTTTCC

Downstream 100 bases:

>100_bases
TGGCAATAAATCCACAAGAAACAAAAAATAGTTTATTTAGTGGTTTGAAATCTACTTCTCAAAAGCCTCTTGAAGAAGTA
AAACCAGAATCAGCCTCTTT

Product: putative sporulation initiation inhibitor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MAILNDKISLKDIIKPTLVDNLQIAPSGEPMIDLDLKLHSCPIRREYKLKVALKNDLISEYDFILIDNPPHISFTTVNSL
IASNYYLVPVSAEYLPLVGIRHLIKTIELIKPSNPSISNLGSLLTMVNRRESISSDVENILRDTFPGDMFENVIRVNTKL
KACPQKRQTIFQAENSKGKGHFDYLNATKELLHRLEKA

Sequences:

>Translated_198_residues
MAILNDKISLKDIIKPTLVDNLQIAPSGEPMIDLDLKLHSCPIRREYKLKVALKNDLISEYDFILIDNPPHISFTTVNSL
IASNYYLVPVSAEYLPLVGIRHLIKTIELIKPSNPSISNLGSLLTMVNRRESISSDVENILRDTFPGDMFENVIRVNTKL
KACPQKRQTIFQAENSKGKGHFDYLNATKELLHRLEKA
>Mature_197_residues
AILNDKISLKDIIKPTLVDNLQIAPSGEPMIDLDLKLHSCPIRREYKLKVALKNDLISEYDFILIDNPPHISFTTVNSLI
ASNYYLVPVSAEYLPLVGIRHLIKTIELIKPSNPSISNLGSLLTMVNRRESISSDVENILRDTFPGDMFENVIRVNTKLK
ACPQKRQTIFQAENSKGKGHFDYLNATKELLHRLEKA

Specific function: Inhibits the initiation of sporulation, spo0J antagonizes this inhibition. Soj ultimately inhibits the activation (phosphorylation) of spo0A. It is not required for chromosome partitioning [H]

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 22425; Mature: 22294

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAILNDKISLKDIIKPTLVDNLQIAPSGEPMIDLDLKLHSCPIRREYKLKVALKNDLISE
CCCCCCCCCHHHHHCHHHHCCEEECCCCCCEEEEEEEEECCCCCCCEEEEEEEHHCCCCC
YDFILIDNPPHISFTTVNSLIASNYYLVPVSAEYLPLVGIRHLIKTIELIKPSNPSISNL
CCEEEECCCCCEEHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHH
GSLLTMVNRRESISSDVENILRDTFPGDMFENVIRVNTKLKACPQKRQTIFQAENSKGKG
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHCCCHHHHHHHHCCCCCCCC
HFDYLNATKELLHRLEKA
CHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AILNDKISLKDIIKPTLVDNLQIAPSGEPMIDLDLKLHSCPIRREYKLKVALKNDLISE
CCCCCCCCHHHHHCHHHHCCEEECCCCCCEEEEEEEEECCCCCCCEEEEEEEHHCCCCC
YDFILIDNPPHISFTTVNSLIASNYYLVPVSAEYLPLVGIRHLIKTIELIKPSNPSISNL
CCEEEECCCCCEEHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHH
GSLLTMVNRRESISSDVENILRDTFPGDMFENVIRVNTKLKACPQKRQTIFQAENSKGKG
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHCCCHHHHHHHHCCCCCCCC
HFDYLNATKELLHRLEKA
CHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]