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The map label for this gene is insC1 [C]

Identifier: 46446662

GI number: 46446662

Start: 1215757

End: 1216134

Strand: Direct

Name: insC1 [C]

Synonym: pc1028

Alternate gene names: 46446662

Gene position: 1215757-1216134 (Clockwise)

Preceding gene: 46446661

Following gene: 46446663

Centisome position: 50.35

GC content: 37.3

Gene sequence:

>378_bases
ATGACTAATTGTAAATTAATTACATCAGTAGAAAGAAGAAGACGATGGTCCTTAGAAGAAAAAAAACAGATTATTGAAAA
AACATATCAAGAAGGTCAATCTGTTTCCCAAATAGCAAGAAGATATGATATAACACCAAGTCAACTTTTTGCATGGAGAA
GGCAAATGGAACAAGGAGCACTACAAGGAATTAGCAGCCGAGAAGAACTAGTTCCCAAAAGCCAAGTGAAAGAAATGGAA
AAGCGAATAAGAGAACTAGAGCGGATGCTTGGGAAAAAGACACTTGAAAATGAAATTTTAAAAGAGGCTGTAAGGCTTGG
GCAGGAAAAAAAACTCATCTCGCGGCAGCCATTGCCAAGCTTAAGCGATTTAGCCTAA

Upstream 100 bases:

>100_bases
GGAACTTAGAATAATTTTCTAGAGATTGCTAAATGTAGTGCTCCCCAAATAAACCGGACCATCTGGCTTGCTTCTAAGAT
ATAGGAGTAAGACTAGATTT

Downstream 100 bases:

>100_bases
GGAAAATAGCAGAGGTGATGGAAGTATCAAGATCCAATCTTATAGAGCAGCTTAAAAAGCATTTACCTCATCAGCCAATC
TTTTATTCTAAAGCGGAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 124

Protein sequence:

>125_residues
MTNCKLITSVERRRRWSLEEKKQIIEKTYQEGQSVSQIARRYDITPSQLFAWRRQMEQGALQGISSREELVPKSQVKEME
KRIRELERMLGKKTLENEILKEAVRLGQEKKLISRQPLPSLSDLA

Sequences:

>Translated_125_residues
MTNCKLITSVERRRRWSLEEKKQIIEKTYQEGQSVSQIARRYDITPSQLFAWRRQMEQGALQGISSREELVPKSQVKEME
KRIRELERMLGKKTLENEILKEAVRLGQEKKLISRQPLPSLSDLA
>Mature_124_residues
TNCKLITSVERRRRWSLEEKKQIIEKTYQEGQSVSQIARRYDITPSQLFAWRRQMEQGALQGISSREELVPKSQVKEMEK
RIRELERMLGKKTLENEILKEAVRLGQEKKLISRQPLPSLSDLA

Specific function: Involved in the transposition of the insertion sequence is2 [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI145693215, Length=112, Percent_Identity=43.75, Blast_Score=108, Evalue=1e-25,
Organism=Escherichia coli, GI145693180, Length=112, Percent_Identity=43.75, Blast_Score=108, Evalue=1e-25,
Organism=Escherichia coli, GI145693177, Length=112, Percent_Identity=43.75, Blast_Score=108, Evalue=1e-25,
Organism=Escherichia coli, GI145693154, Length=112, Percent_Identity=43.75, Blast_Score=108, Evalue=1e-25,
Organism=Escherichia coli, GI145693126, Length=112, Percent_Identity=43.75, Blast_Score=108, Evalue=1e-25,
Organism=Escherichia coli, GI145693097, Length=112, Percent_Identity=43.75, Blast_Score=108, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR002514 [H]

Pfam domain/function: PF00665 rve; PF01527 Transposase_8 [H]

EC number: NA

Molecular weight: Translated: 14741; Mature: 14610

Theoretical pI: Translated: 10.56; Mature: 10.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNCKLITSVERRRRWSLEEKKQIIEKTYQEGQSVSQIARRYDITPSQLFAWRRQMEQGA
CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LQGISSREELVPKSQVKEMEKRIRELERMLGKKTLENEILKEAVRLGQEKKLISRQPLPS
HHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCC
LSDLA
HHCCC
>Mature Secondary Structure 
TNCKLITSVERRRRWSLEEKKQIIEKTYQEGQSVSQIARRYDITPSQLFAWRRQMEQGA
CCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LQGISSREELVPKSQVKEMEKRIRELERMLGKKTLENEILKEAVRLGQEKKLISRQPLPS
HHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCC
LSDLA
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA