| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446647
Identifier: 46446647
GI number: 46446647
Start: 1207801
End: 1208076
Strand: Direct
Name: 46446647
Synonym: pc1013
Alternate gene names: NA
Gene position: 1207801-1208076 (Clockwise)
Preceding gene: 46446639
Following gene: 46446648
Centisome position: 50.02
GC content: 30.07
Gene sequence:
>276_bases TTGACGAATTTATTATTGGGATTGTTCATAGTGAAGACAGTGAACCTGTCAGAGCTAGCAACAGTTTTATATAGTAAGGC AAAAATTGATTCTAATTTCAAACGAATACAAAGATTTTTCAACTGGCTAACTTCTTTGAATGATTATCAAGAGGTCATAA CAGATTTAGTGATTATCATTTTAGATCTTAAAAATAAGAAAAATGACTTGGCATTAGATAGGACAGATTGGAAATTCGGC AAAAAAACACATCAATATTTTGACCTTAGGAGTTAA
Upstream 100 bases:
>100_bases ACTTTAGAAACCACTCTGGAGGCACTATGAAACACATATGCGAGCTGCATAACATTTTTTAGGTCAATATTTTAATTGGA ACAAGTCAAGATTAACTGTA
Downstream 100 bases:
>100_bases TTTTAAAGGGATTAGCATTCCTCTAGCTTGGATTTCCTTAGGAAGAGCAGGTAATTCCAAAACCCTCGATCGTCTATCAG TACTTAAAAGAGTGATGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 91; Mature: 90
Protein sequence:
>91_residues MTNLLLGLFIVKTVNLSELATVLYSKAKIDSNFKRIQRFFNWLTSLNDYQEVITDLVIIILDLKNKKNDLALDRTDWKFG KKTHQYFDLRS
Sequences:
>Translated_91_residues MTNLLLGLFIVKTVNLSELATVLYSKAKIDSNFKRIQRFFNWLTSLNDYQEVITDLVIIILDLKNKKNDLALDRTDWKFG KKTHQYFDLRS >Mature_90_residues TNLLLGLFIVKTVNLSELATVLYSKAKIDSNFKRIQRFFNWLTSLNDYQEVITDLVIIILDLKNKKNDLALDRTDWKFGK KTHQYFDLRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10756; Mature: 10624
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNLLLGLFIVKTVNLSELATVLYSKAKIDSNFKRIQRFFNWLTSLNDYQEVITDLVIII CCHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH LDLKNKKNDLALDRTDWKFGKKTHQYFDLRS HHCCCCCCCCCCCCCCCHHCHHHHHHCCCCC >Mature Secondary Structure TNLLLGLFIVKTVNLSELATVLYSKAKIDSNFKRIQRFFNWLTSLNDYQEVITDLVIII CHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH LDLKNKKNDLALDRTDWKFGKKTHQYFDLRS HHCCCCCCCCCCCCCCCHHCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA