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The map label for this gene is 46446621

Identifier: 46446621

GI number: 46446621

Start: 1182166

End: 1182501

Strand: Direct

Name: 46446621

Synonym: pc0987

Alternate gene names: NA

Gene position: 1182166-1182501 (Clockwise)

Preceding gene: 46446620

Following gene: 46446622

Centisome position: 48.96

GC content: 36.9

Gene sequence:

>336_bases
TTGAAAAAAAGGGGCTTTAAGATTAACCATGAGAAGCTTTTTAGACTTTATCAGGAAATGGGACTAAAAGTTAGAAAAAG
AGGAGCTCGAAGACGAGGAGTTGGGATAAGGCTTGCGCGGATAAAAGCTTCACAAATCAATAAAGTTTGGAGCCTTGATT
TTATGTCGGATCGGCTTGCAAATGGAAAGAAAATCAGATTACTCAATATTGTAGATGAGTTTACTAGGGAGAGTTTGAAA
ATGATTGTAGACACATCTCTTTCCGGATTAAGAGTGGTAAGGGAGTTGGAAGAGTTAATTAAATACAGAGGGTATCCTAG
ACAAATTATCAGTTAG

Upstream 100 bases:

>100_bases
ATAGTTGTCGAAAAGGCAAGGAGATGAACAAGTAAAAGCACTCATTAAAGCAGTGGCTCTTGAAAGACCTTGATTTGGTT
ATCGACGCATTCATTTTATA

Downstream 100 bases:

>100_bases
AAGGGTTTGAGGCTTCGCCTATGAATTCATTTGGTTTTATGATAGGAGAAACAGCAGTAATGATGAAGGAAATTGAAGAT
ATGAAACAACAACAAGCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MKKRGFKINHEKLFRLYQEMGLKVRKRGARRRGVGIRLARIKASQINKVWSLDFMSDRLANGKKIRLLNIVDEFTRESLK
MIVDTSLSGLRVVRELEELIKYRGYPRQIIS

Sequences:

>Translated_111_residues
MKKRGFKINHEKLFRLYQEMGLKVRKRGARRRGVGIRLARIKASQINKVWSLDFMSDRLANGKKIRLLNIVDEFTRESLK
MIVDTSLSGLRVVRELEELIKYRGYPRQIIS
>Mature_111_residues
MKKRGFKINHEKLFRLYQEMGLKVRKRGARRRGVGIRLARIKASQINKVWSLDFMSDRLANGKKIRLLNIVDEFTRESLK
MIVDTSLSGLRVVRELEELIKYRGYPRQIIS

Specific function: Unknown

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 13133; Mature: 13133

Theoretical pI: Translated: 11.73; Mature: 11.73

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRGFKINHEKLFRLYQEMGLKVRKRGARRRGVGIRLARIKASQINKVWSLDFMSDRLA
CCCCCCCCCHHHHHHHHHHHCHHHHHHCCHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHC
NGKKIRLLNIVDEFTRESLKMIVDTSLSGLRVVRELEELIKYRGYPRQIIS
CCCEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHCC
>Mature Secondary Structure
MKKRGFKINHEKLFRLYQEMGLKVRKRGARRRGVGIRLARIKASQINKVWSLDFMSDRLA
CCCCCCCCCHHHHHHHHHHHCHHHHHHCCHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHC
NGKKIRLLNIVDEFTRESLKMIVDTSLSGLRVVRELEELIKYRGYPRQIIS
CCCEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1718819 [H]