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The map label for this gene is blc [H]

Identifier: 46446577

GI number: 46446577

Start: 1140999

End: 1141577

Strand: Direct

Name: blc [H]

Synonym: pc0943

Alternate gene names: 46446577

Gene position: 1140999-1141577 (Clockwise)

Preceding gene: 46446575

Following gene: 46446589

Centisome position: 47.26

GC content: 32.99

Gene sequence:

>579_bases
ATGAGACATCATTTTTTTGTAATTCTATTTTCTAGTCTTTTTCTTTATTACCAAAATATTCAAGGAATAGAATATCCTCC
CTTTCAAACAGTTTCAAATGTCGATTTAAATCGTTATATGGGCACCTGGTATGAAATTGCCCGTTTAGATGAGCCATGGG
ATAGAGGATGTTATCATAACCCAATGGTTATTTATACAATGCAAAGTGATGGAATCATTCAGGTTGTTAATCAATGCGAT
ATAAATAGTTTTTTTAAATCTGTCCAGAGGGCAGAAGGAACAGCCGAAATTATTGATAAACAAACGCAGGCAAAGTGGAA
AATCACCTTTCCGGCTACAGAACAGTATAAAGGATTGCCTATTGGAGATTACTGGATCATTATTTTAGCAGATGATTATA
GTTACGCAGCTGTTAGTGATTCTGATCAAAAACATTTGTGGATATTAAGCCGCACACCCTTTTTACCTGAAGTTATTTAT
AAACAAATTTTAGATAAAGTTGTTCTTTTGATGCCGGATTTAAACATTTTAAATGTATTTCGAGCCAAACAAGATTCTTC
TGCTAAAGCAACAAAATAA

Upstream 100 bases:

>100_bases
AATTTCGAAAGAATTTTATATTTTATACATTTTGCTTTAAATTAACGTTATTTTTCGATAAAAAATCGAAATGATCAATA
GTGATTTAAGGATAGGCATA

Downstream 100 bases:

>100_bases
ATGCTGCTTTAGTTAACAATACCTCTACATATTATATCGGTTAGGATCATTGGCTCTTGGAATATTATCAATAAGATAAT
TGACAAATTCTTTCCATTTC

Product: putative outer membrane lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MRHHFFVILFSSLFLYYQNIQGIEYPPFQTVSNVDLNRYMGTWYEIARLDEPWDRGCYHNPMVIYTMQSDGIIQVVNQCD
INSFFKSVQRAEGTAEIIDKQTQAKWKITFPATEQYKGLPIGDYWIIILADDYSYAAVSDSDQKHLWILSRTPFLPEVIY
KQILDKVVLLMPDLNILNVFRAKQDSSAKATK

Sequences:

>Translated_192_residues
MRHHFFVILFSSLFLYYQNIQGIEYPPFQTVSNVDLNRYMGTWYEIARLDEPWDRGCYHNPMVIYTMQSDGIIQVVNQCD
INSFFKSVQRAEGTAEIIDKQTQAKWKITFPATEQYKGLPIGDYWIIILADDYSYAAVSDSDQKHLWILSRTPFLPEVIY
KQILDKVVLLMPDLNILNVFRAKQDSSAKATK
>Mature_192_residues
MRHHFFVILFSSLFLYYQNIQGIEYPPFQTVSNVDLNRYMGTWYEIARLDEPWDRGCYHNPMVIYTMQSDGIIQVVNQCD
INSFFKSVQRAEGTAEIIDKQTQAKWKITFPATEQYKGLPIGDYWIIILADDYSYAAVSDSDQKHLWILSRTPFLPEVIY
KQILDKVVLLMPDLNILNVFRAKQDSSAKATK

Specific function: Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids [H]

COG id: COG3040

COG function: function code M; Bacterial lipocalin

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the calycin superfamily. Lipocalin family [H]

Homologues:

Organism=Escherichia coli, GI1790592, Length=134, Percent_Identity=35.8208955223881, Blast_Score=81, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012674
- InterPro:   IPR011038
- InterPro:   IPR013208
- InterPro:   IPR022271
- InterPro:   IPR002446
- InterPro:   IPR022272 [H]

Pfam domain/function: PF08212 Lipocalin_2 [H]

EC number: NA

Molecular weight: Translated: 22434; Mature: 22434

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHHFFVILFSSLFLYYQNIQGIEYPPFQTVSNVDLNRYMGTWYEIARLDEPWDRGCYHN
CCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHCCCCCC
PMVIYTMQSDGIIQVVNQCDINSFFKSVQRAEGTAEIIDKQTQAKWKITFPATEQYKGLP
CEEEEEECCCCCEEHHHHCCHHHHHHHHHHCCCHHHHHCCCCCCEEEEECCCCCCCCCCC
IGDYWIIILADDYSYAAVSDSDQKHLWILSRTPFLPEVIYKQILDKVVLLMPDLNILNVF
CCCEEEEEEECCCCEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHH
RAKQDSSAKATK
HCCCCCCCCCCC
>Mature Secondary Structure
MRHHFFVILFSSLFLYYQNIQGIEYPPFQTVSNVDLNRYMGTWYEIARLDEPWDRGCYHN
CCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHCCCCCC
PMVIYTMQSDGIIQVVNQCDINSFFKSVQRAEGTAEIIDKQTQAKWKITFPATEQYKGLP
CEEEEEECCCCCEEHHHHCCHHHHHHHHHHCCCHHHHHCCCCCCEEEEECCCCCCCCCCC
IGDYWIIILADDYSYAAVSDSDQKHLWILSRTPFLPEVIYKQILDKVVLLMPDLNILNVF
CCCEEEEEEECCCCEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHH
RAKQDSSAKATK
HCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]