| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446571
Identifier: 46446571
GI number: 46446571
Start: 1127815
End: 1128186
Strand: Reverse
Name: 46446571
Synonym: pc0937
Alternate gene names: NA
Gene position: 1128186-1127815 (Counterclockwise)
Preceding gene: 46446572
Following gene: 46446570
Centisome position: 46.73
GC content: 29.3
Gene sequence:
>372_bases ATGAAAGAATTTGTCAATGCAACTTTTGGATTAGAAAAATCATTCATTTTAGAGTTTTGTTGGAAAAAATTCTCAAATAA TTTTATTCCTTATCCAACATTTGCGTTTTTAAGCACTTTCTTACTTATTTTATTAAATTTAACTAATGTAGCAGCAAGCT TAGAAATCAAAGCAGAGGCAAAAAGTCAATTATTTTTTCCAGCTTCTAAACGTTTTCGTCGCATTTATGGAAATTGTATG GGAGGGTATGAAGGACAAGTCACCGTTTTTTTCCTAAATATTTTCAAGGATGGATCAATGTCGATGGAATGTCCAAAAAA GGCCATTCTTTTTACTTACATGATTTTACAAGAATATCAATTGTTAATATGA
Upstream 100 bases:
>100_bases TACTTACTATATTGTCTCAGTTAACAAGAAAGGAGTCAAATCTGCACCTATTAGCACAAAGGTTTTTCCTATCAAGAAAC GTCGTTAAAGGAAAATGTTA
Downstream 100 bases:
>100_bases GCTTTGGCATGCAGTACACCTATATTTTGCCAAGAAATTTATCTTTCTATGTTGGATTAGGGCCGAGTTTTGGAATTGTC AAATTAGAAAAACAATTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MKEFVNATFGLEKSFILEFCWKKFSNNFIPYPTFAFLSTFLLILLNLTNVAASLEIKAEAKSQLFFPASKRFRRIYGNCM GGYEGQVTVFFLNIFKDGSMSMECPKKAILFTYMILQEYQLLI
Sequences:
>Translated_123_residues MKEFVNATFGLEKSFILEFCWKKFSNNFIPYPTFAFLSTFLLILLNLTNVAASLEIKAEAKSQLFFPASKRFRRIYGNCM GGYEGQVTVFFLNIFKDGSMSMECPKKAILFTYMILQEYQLLI >Mature_123_residues MKEFVNATFGLEKSFILEFCWKKFSNNFIPYPTFAFLSTFLLILLNLTNVAASLEIKAEAKSQLFFPASKRFRRIYGNCM GGYEGQVTVFFLNIFKDGSMSMECPKKAILFTYMILQEYQLLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14265; Mature: 14265
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEFVNATFGLEKSFILEFCWKKFSNNFIPYPTFAFLSTFLLILLNLTNVAASLEIKAEA CCCHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECC KSQLFFPASKRFRRIYGNCMGGYEGQVTVFFLNIFKDGSMSMECPKKAILFTYMILQEYQ CCCEECCHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHH LLI HCC >Mature Secondary Structure MKEFVNATFGLEKSFILEFCWKKFSNNFIPYPTFAFLSTFLLILLNLTNVAASLEIKAEA CCCHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECC KSQLFFPASKRFRRIYGNCMGGYEGQVTVFFLNIFKDGSMSMECPKKAILFTYMILQEYQ CCCEECCHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHH LLI HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA