| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446545
Identifier: 46446545
GI number: 46446545
Start: 1103053
End: 1105284
Strand: Direct
Name: 46446545
Synonym: pc0911
Alternate gene names: NA
Gene position: 1103053-1105284 (Clockwise)
Preceding gene: 46446544
Following gene: 46446554
Centisome position: 45.69
GC content: 33.83
Gene sequence:
>2232_bases GTGAAACTTTTGCATAAAACGTTGATTTTTCTATTAGGTATAGTTAGCTTTCCGCTTGTTGTGATTGCTGTCCCTCAACT AGAAAAAAAAATGACGTTGGATTATTTAGCGAGTCAAATTTCTCAAGAACAATATCCAGCTTTAGCACTTTTTAAAATCT GGGATTCCTCTATAGAGATTGCCGATCAATCTAAAGAGTTATCTTGCACTCCTCTTGACTTATTAAATTCTGTGAAAATT TGTTCACAAGAACAATTTGCTTATCAATTTATTAAACTTTGTCATCAACTTGGCATTCGCACACGATTAAGTAGTAAACA GAATGCTTTTGCCTTTGATTTTGGCTATGACGACGAATGGATCTTCATTGATTTAGAAAAAAAACAAGTTTATCTAACTT TAGACAATCAAACACTAGCCTCTTCCGAAGATTTAATGGACGATCCATTTTTAGCTTTAAGAAGTAAAGATTCACTTTAT GATACTGATGTTGACTTTGAAAAAAGTATTATAAAACTGGCCCAATTCTCGATTACTGAACCTTTTTTGGTCGAGCAAGA AAGTGGCTTATATGGACAAATATTTGATACAGAGAGCGAATTTAATCCATTTAATATTGATGAAGATGATTTAAAAGACC CTGTACCTGGGGATATACAAGTTGGGAATCAATCCCAAGTGTTTGATTTTACTTCTCCTTGTTTTTACTTAATGGATCTA GGTGAAGTGCCTGCAGAAAAAATTTGGTGGCAAATTTCCCCTAACCCTACTTTTAATTTTATTCCCTCCAATTTTGAACA AATTGAGCCTTTTAAAACAGAAGTCATTTTATCTCCGACAACTGAAACATTTTTTAATGCGGGAAGCATTTATTATTTCC GAATTAAAGGCTTCTCTGATGGTAAATGGGGTGCTTGGTCCAGAATTTTTGCCTTTACCGTTGAAAAACCAGATCCAGTT GCATTAGTAGAATTTGAAAAAAAGGGTCAGCTTTTTGAGCTAAGTTGGGAGAGAGAATCTATTGATGATCCGGCTATTGA ATATTTGGTTTTCGGATCAAACTCTCTAGATTTTATTCCTACTCCTTATACAAATTTGCAAATTAATGCAATAGAAGACG GGAAAATCACAGATATAGAAATTAATAACAACTTAGTTGCAATTATTAAAGAAACTAAAATTTTGGTAGATGGATCTTTA GCATACTATCGTATTATTGCACGGAAAAATGGACAATACTCAGTCCCTTCTTCCCTTATCCATGTTTATGATGAGGAACT TATTCAACCACGTAACGTTTTGCAAGTTGTTGAACAAGAAGATGGTAAACAAATTATTAAAAGAATATTATTACCCCTTT CTTATCCATATTTTCAAAGTTTTTTACCCCAAATTTCTAACACTTACGATACTTTTGACAATAGCCTAATTAAACTCTAT AAAATTTATCATCGAACACCAGTTTTACCTTTAATAGAAATCAAAGCTTATCAAAAATCTTCTTATGTACCAGATCAAAT TTGGGAACATGTGCGACCCTATTTATTGCCAGAAAACCATCCGGTTAAGCCTAAATTAGATCGTATGTTTTCGGCAACTC GCGTGATTTTAACACCAGAAACTTTTAAAAAGGCTGGTTTTAAACGCTATCAACAAGGACGTGCTAGCCGCATCATGGCA TCCCCCCACCCTGATTTACCTCACCACTTTATCAAGGCATTTCCAGATAGCGATCTTGTTGTACGGGCAGAGTGGCATAA ATTTGTTCATCGCATTGAAGGGGCAAAAGTGATAAGAAACTGGATTGCTAATAATAACTTACAAGCCACTTTCAGTGTTC CTAAGAAATGGATTTATCCTTTACCAGAATATCCCTCTCCTCCTAATTCATCTAGATACATGCGAAAAAATTTTATTTTA GTCGCAGAAAATATGCGTATTTTGAGTCATGACAAAAATGAAAAGGCCTATAAACATCGTATGACTCGCAAATTATTAGA CCAAATTTATCAAGTTTTTGACGATTTAGGGCTGTATGATTCTGTTTATGCTTTTAATGTCCCTTTTTGCAAAAATGGAA AGCTAGCTTTTATTGATACTGAACATCATCATAGATGGCCAGTTCCTTTTCAAAAGCTTAAAAAATACTTTTCAAATGAT ATGCAAAATTATTGGCAGCAACTTATTGATAAAGGTGGGCCAAAAGGGCATGTTAGAAATCCTAATTATTAG
Upstream 100 bases:
>100_bases CCCTAATTTTTATGGGATGATAATCAGCCAAAAAAGTTTAAATGTGCGATTGAATCCGCACGAGGGCCTTTAGCGAAACA TTTTAAAGTGAGTTTTTACT
Downstream 100 bases:
>100_bases GAAATTTCTTTTTTGGAGTCGATACTTAACACAGTATCGACTCTATATTTTAGAGGGCTATTTATGTAGATTTTTTGTTC TGTTTTTCAAACACTCTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 743; Mature: 743
Protein sequence:
>743_residues MKLLHKTLIFLLGIVSFPLVVIAVPQLEKKMTLDYLASQISQEQYPALALFKIWDSSIEIADQSKELSCTPLDLLNSVKI CSQEQFAYQFIKLCHQLGIRTRLSSKQNAFAFDFGYDDEWIFIDLEKKQVYLTLDNQTLASSEDLMDDPFLALRSKDSLY DTDVDFEKSIIKLAQFSITEPFLVEQESGLYGQIFDTESEFNPFNIDEDDLKDPVPGDIQVGNQSQVFDFTSPCFYLMDL GEVPAEKIWWQISPNPTFNFIPSNFEQIEPFKTEVILSPTTETFFNAGSIYYFRIKGFSDGKWGAWSRIFAFTVEKPDPV ALVEFEKKGQLFELSWERESIDDPAIEYLVFGSNSLDFIPTPYTNLQINAIEDGKITDIEINNNLVAIIKETKILVDGSL AYYRIIARKNGQYSVPSSLIHVYDEELIQPRNVLQVVEQEDGKQIIKRILLPLSYPYFQSFLPQISNTYDTFDNSLIKLY KIYHRTPVLPLIEIKAYQKSSYVPDQIWEHVRPYLLPENHPVKPKLDRMFSATRVILTPETFKKAGFKRYQQGRASRIMA SPHPDLPHHFIKAFPDSDLVVRAEWHKFVHRIEGAKVIRNWIANNNLQATFSVPKKWIYPLPEYPSPPNSSRYMRKNFIL VAENMRILSHDKNEKAYKHRMTRKLLDQIYQVFDDLGLYDSVYAFNVPFCKNGKLAFIDTEHHHRWPVPFQKLKKYFSND MQNYWQQLIDKGGPKGHVRNPNY
Sequences:
>Translated_743_residues MKLLHKTLIFLLGIVSFPLVVIAVPQLEKKMTLDYLASQISQEQYPALALFKIWDSSIEIADQSKELSCTPLDLLNSVKI CSQEQFAYQFIKLCHQLGIRTRLSSKQNAFAFDFGYDDEWIFIDLEKKQVYLTLDNQTLASSEDLMDDPFLALRSKDSLY DTDVDFEKSIIKLAQFSITEPFLVEQESGLYGQIFDTESEFNPFNIDEDDLKDPVPGDIQVGNQSQVFDFTSPCFYLMDL GEVPAEKIWWQISPNPTFNFIPSNFEQIEPFKTEVILSPTTETFFNAGSIYYFRIKGFSDGKWGAWSRIFAFTVEKPDPV ALVEFEKKGQLFELSWERESIDDPAIEYLVFGSNSLDFIPTPYTNLQINAIEDGKITDIEINNNLVAIIKETKILVDGSL AYYRIIARKNGQYSVPSSLIHVYDEELIQPRNVLQVVEQEDGKQIIKRILLPLSYPYFQSFLPQISNTYDTFDNSLIKLY KIYHRTPVLPLIEIKAYQKSSYVPDQIWEHVRPYLLPENHPVKPKLDRMFSATRVILTPETFKKAGFKRYQQGRASRIMA SPHPDLPHHFIKAFPDSDLVVRAEWHKFVHRIEGAKVIRNWIANNNLQATFSVPKKWIYPLPEYPSPPNSSRYMRKNFIL VAENMRILSHDKNEKAYKHRMTRKLLDQIYQVFDDLGLYDSVYAFNVPFCKNGKLAFIDTEHHHRWPVPFQKLKKYFSND MQNYWQQLIDKGGPKGHVRNPNY >Mature_743_residues MKLLHKTLIFLLGIVSFPLVVIAVPQLEKKMTLDYLASQISQEQYPALALFKIWDSSIEIADQSKELSCTPLDLLNSVKI CSQEQFAYQFIKLCHQLGIRTRLSSKQNAFAFDFGYDDEWIFIDLEKKQVYLTLDNQTLASSEDLMDDPFLALRSKDSLY DTDVDFEKSIIKLAQFSITEPFLVEQESGLYGQIFDTESEFNPFNIDEDDLKDPVPGDIQVGNQSQVFDFTSPCFYLMDL GEVPAEKIWWQISPNPTFNFIPSNFEQIEPFKTEVILSPTTETFFNAGSIYYFRIKGFSDGKWGAWSRIFAFTVEKPDPV ALVEFEKKGQLFELSWERESIDDPAIEYLVFGSNSLDFIPTPYTNLQINAIEDGKITDIEINNNLVAIIKETKILVDGSL AYYRIIARKNGQYSVPSSLIHVYDEELIQPRNVLQVVEQEDGKQIIKRILLPLSYPYFQSFLPQISNTYDTFDNSLIKLY KIYHRTPVLPLIEIKAYQKSSYVPDQIWEHVRPYLLPENHPVKPKLDRMFSATRVILTPETFKKAGFKRYQQGRASRIMA SPHPDLPHHFIKAFPDSDLVVRAEWHKFVHRIEGAKVIRNWIANNNLQATFSVPKKWIYPLPEYPSPPNSSRYMRKNFIL VAENMRILSHDKNEKAYKHRMTRKLLDQIYQVFDDLGLYDSVYAFNVPFCKNGKLAFIDTEHHHRWPVPFQKLKKYFSND MQNYWQQLIDKGGPKGHVRNPNY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 86468; Mature: 86468
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLHKTLIFLLGIVSFPLVVIAVPQLEKKMTLDYLASQISQEQYPALALFKIWDSSIEI CCHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEEHHCCCEEE ADQSKELSCTPLDLLNSVKICSQEQFAYQFIKLCHQLGIRTRLSSKQNAFAFDFGYDDEW CCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHCCCCCCCEEEECCCCCCE IFIDLEKKQVYLTLDNQTLASSEDLMDDPFLALRSKDSLYDTDVDFEKSIIKLAQFSITE EEEEEECCEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCC PFLVEQESGLYGQIFDTESEFNPFNIDEDDLKDPVPGDIQVGNQSQVFDFTSPCFYLMDL CEEEECCCCCEEEEECCCCCCCCCCCCHHHCCCCCCCCEEECCCCCEEECCCCHHEEHCC GEVPAEKIWWQISPNPTFNFIPSNFEQIEPFKTEVILSPTTETFFNAGSIYYFRIKGFSD CCCCCCCEEEEECCCCCEECCCCCHHHCCCCCEEEEECCCHHHHHCCCCEEEEEEECCCC GKWGAWSRIFAFTVEKPDPVALVEFEKKGQLFELSWERESIDDPAIEYLVFGSNSLDFIP CCCCCCEEEEEEEECCCCCEEEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCC TPYTNLQINAIEDGKITDIEINNNLVAIIKETKILVDGSLAYYRIIARKNGQYSVPSSLI CCCCCEEEEEECCCCEEEEEECCCEEEEEEEEEEEEECCEEEEEEEEECCCCCCCCHHHH HVYDEELIQPRNVLQVVEQEDGKQIIKRILLPLSYPYFQSFLPQISNTYDTFDNSLIKLY HHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHH KIYHRTPVLPLIEIKAYQKSSYVPDQIWEHVRPYLLPENHPVKPKLDRMFSATRVILTPE HHHHCCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCEEEECCH TFKKAGFKRYQQGRASRIMASPHPDLPHHFIKAFPDSDLVVRAEWHKFVHRIEGAKVIRN HHHHHHHHHHHCCHHHEEECCCCCCCCHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHH WIANNNLQATFSVPKKWIYPLPEYPSPPNSSRYMRKNFILVAENMRILSHDKNEKAYKHR HHCCCCCEEEECCCHHHCCCCCCCCCCCCCCCEEECCEEEEECCCEEECCCCCHHHHHHH MTRKLLDQIYQVFDDLGLYDSVYAFNVPFCKNGKLAFIDTEHHHRWPVPFQKLKKYFSND HHHHHHHHHHHHHHHCCCCCCCEEEECCEECCCCEEEEECCCCCCCCCCHHHHHHHHHHH MQNYWQQLIDKGGPKGHVRNPNY HHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MKLLHKTLIFLLGIVSFPLVVIAVPQLEKKMTLDYLASQISQEQYPALALFKIWDSSIEI CCHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEEHHCCCEEE ADQSKELSCTPLDLLNSVKICSQEQFAYQFIKLCHQLGIRTRLSSKQNAFAFDFGYDDEW CCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHCCCCCCCEEEECCCCCCE IFIDLEKKQVYLTLDNQTLASSEDLMDDPFLALRSKDSLYDTDVDFEKSIIKLAQFSITE EEEEEECCEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCC PFLVEQESGLYGQIFDTESEFNPFNIDEDDLKDPVPGDIQVGNQSQVFDFTSPCFYLMDL CEEEECCCCCEEEEECCCCCCCCCCCCHHHCCCCCCCCEEECCCCCEEECCCCHHEEHCC GEVPAEKIWWQISPNPTFNFIPSNFEQIEPFKTEVILSPTTETFFNAGSIYYFRIKGFSD CCCCCCCEEEEECCCCCEECCCCCHHHCCCCCEEEEECCCHHHHHCCCCEEEEEEECCCC GKWGAWSRIFAFTVEKPDPVALVEFEKKGQLFELSWERESIDDPAIEYLVFGSNSLDFIP CCCCCCEEEEEEEECCCCCEEEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCC TPYTNLQINAIEDGKITDIEINNNLVAIIKETKILVDGSLAYYRIIARKNGQYSVPSSLI CCCCCEEEEEECCCCEEEEEECCCEEEEEEEEEEEEECCEEEEEEEEECCCCCCCCHHHH HVYDEELIQPRNVLQVVEQEDGKQIIKRILLPLSYPYFQSFLPQISNTYDTFDNSLIKLY HHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHH KIYHRTPVLPLIEIKAYQKSSYVPDQIWEHVRPYLLPENHPVKPKLDRMFSATRVILTPE HHHHCCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCEEEECCH TFKKAGFKRYQQGRASRIMASPHPDLPHHFIKAFPDSDLVVRAEWHKFVHRIEGAKVIRN HHHHHHHHHHHCCHHHEEECCCCCCCCHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHH WIANNNLQATFSVPKKWIYPLPEYPSPPNSSRYMRKNFILVAENMRILSHDKNEKAYKHR HHCCCCCEEEECCCHHHCCCCCCCCCCCCCCCEEECCEEEEECCCEEECCCCCHHHHHHH MTRKLLDQIYQVFDDLGLYDSVYAFNVPFCKNGKLAFIDTEHHHRWPVPFQKLKKYFSND HHHHHHHHHHHHHHHCCCCCCCEEEECCEECCCCEEEEECCCCCCCCCCHHHHHHHHHHH MQNYWQQLIDKGGPKGHVRNPNY HHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA