| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446485
Identifier: 46446485
GI number: 46446485
Start: 1033589
End: 1034959
Strand: Direct
Name: 46446485
Synonym: pc0851
Alternate gene names: NA
Gene position: 1033589-1034959 (Clockwise)
Preceding gene: 46446483
Following gene: 46446486
Centisome position: 42.81
GC content: 42.89
Gene sequence:
>1371_bases ATGAGTCGGATGAAGGCTTCTGCTAATAGACAAGTAAAAATACTTCAAGAGGTGTTTATGATAGATCAAACAGAGCTTAT CAATCAAATCAGAGAAGAAGCGATTGTTTTTGATGAGATATCCACAGCACCTCTCTCTGATTTCTTAAATCGAGTCGGGG ATGCTCGTGTGGTGCTCTTAGGAGAAGCAACTCATGGCACCTCAGAGTTTTATCAGATGCGTGCTCAGCTCACCCAAGCG CTGATCGCACAGCGTGGGTTTAATATAGTTGCGATTGAAGCCGATTGGCCGGATGCGGCGCTTGTGAATCGCTATGTGGG TCATGTGTCTGGAGGTGTTCCCGAGCACAAAGCTTTTAATCGCTTTCCACAGTGGATGTGGAGAAACCAGGAATTCCATG ATTTTGTCGAGTGGCTTCGAAAGTATAATAGCAACATTCCTTCTAAAAGCAACTATGTAGGACTGTATGGTCTTGATCTG TATAGTTTGTACCAATCGATCGATAATGTAATTCGCTATCTGGATCTTAACCATCCTCACCTAGCTGAGCTTGCCCGGCA AAGTTATAACTGTCTTATGGTATGGCAAGGGTCTCCTTCGGATTATGGTTTGGCTGTTCTACAAGGAGAAAATAAAGATT GTAGAGAGGAAGCTCTTTCTGTCCTTAGAAAGCTATTAGAAGTGCAAGTGGCTAAAGGTTTGTTTTCTGAGGATGAAGAA GTGTTAGATGCAATTCAAAATGCACTTTTAGTTGTTAATGCTGAAAAATATTACCGCATAATGTGGGGTTCTTCAACCTC CTCTTGGAATCTACGTGATGGACATATGTTCGAGACTCTAAATCTTTTATTATCTGTTAAAGGTGAGGGAGCTAAAGCTA TTGTGTGGGAACATAATTCTCATGTGGGCAATGCAAAAGCAACGGAGATGCAAGCGCGTGGAGAAATTAATGTTGGACAG CTTTGCAAAGAGCACTATGGGGATGCAGCCTACCTTGTGGGGTTTGGAACACATGAAGGAACGGTCGCTGCAGCCGCGTC ATGGGGCGGTCCGATGAAGATTAAAAAAGTCTTGAATTCTCATAAAGAAAGCTATGAGCGACTCTTCCATGAGACAGGAG TAGGGAAATTTTTCCTACCTCTTCTTTCACCGTATCAAAAAAAAGTCAGACAAGGCTTAATGATGCCAATGTTAGAAAGA GCCATTGGGGTCATCTACCGGCCTGACACTGAACGTTTTAGTCATTATTTTCATGCCATTTTACCAGAGCAATTTGATGA ATATATTTGGTTTGATCAGACGCGGGCGATTACTCCACTGTCTCTAACAGCGCCTCAAGGGATGCCAGATACCTATCCGT TTGGACTTTAA
Upstream 100 bases:
>100_bases CATTCAATGTTAGGATAAAAGAGTCCCTTTGAGTACGAGGAAGAAATGAAAACGCTAGTGAAATAGTGTCTACAATTTTC AGGCGGTTCAAAGGCTTTAT
Downstream 100 bases:
>100_bases TGAAAACCACTAGGAGGGTTTATGGGAAAATTCGACTTAGGCTCAGCAGAGATCCGACATAAATTTAATTCTTCTCATGA AAGGGCAGAGGTAGTTCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 456; Mature: 455
Protein sequence:
>456_residues MSRMKASANRQVKILQEVFMIDQTELINQIREEAIVFDEISTAPLSDFLNRVGDARVVLLGEATHGTSEFYQMRAQLTQA LIAQRGFNIVAIEADWPDAALVNRYVGHVSGGVPEHKAFNRFPQWMWRNQEFHDFVEWLRKYNSNIPSKSNYVGLYGLDL YSLYQSIDNVIRYLDLNHPHLAELARQSYNCLMVWQGSPSDYGLAVLQGENKDCREEALSVLRKLLEVQVAKGLFSEDEE VLDAIQNALLVVNAEKYYRIMWGSSTSSWNLRDGHMFETLNLLLSVKGEGAKAIVWEHNSHVGNAKATEMQARGEINVGQ LCKEHYGDAAYLVGFGTHEGTVAAAASWGGPMKIKKVLNSHKESYERLFHETGVGKFFLPLLSPYQKKVRQGLMMPMLER AIGVIYRPDTERFSHYFHAILPEQFDEYIWFDQTRAITPLSLTAPQGMPDTYPFGL
Sequences:
>Translated_456_residues MSRMKASANRQVKILQEVFMIDQTELINQIREEAIVFDEISTAPLSDFLNRVGDARVVLLGEATHGTSEFYQMRAQLTQA LIAQRGFNIVAIEADWPDAALVNRYVGHVSGGVPEHKAFNRFPQWMWRNQEFHDFVEWLRKYNSNIPSKSNYVGLYGLDL YSLYQSIDNVIRYLDLNHPHLAELARQSYNCLMVWQGSPSDYGLAVLQGENKDCREEALSVLRKLLEVQVAKGLFSEDEE VLDAIQNALLVVNAEKYYRIMWGSSTSSWNLRDGHMFETLNLLLSVKGEGAKAIVWEHNSHVGNAKATEMQARGEINVGQ LCKEHYGDAAYLVGFGTHEGTVAAAASWGGPMKIKKVLNSHKESYERLFHETGVGKFFLPLLSPYQKKVRQGLMMPMLER AIGVIYRPDTERFSHYFHAILPEQFDEYIWFDQTRAITPLSLTAPQGMPDTYPFGL >Mature_455_residues SRMKASANRQVKILQEVFMIDQTELINQIREEAIVFDEISTAPLSDFLNRVGDARVVLLGEATHGTSEFYQMRAQLTQAL IAQRGFNIVAIEADWPDAALVNRYVGHVSGGVPEHKAFNRFPQWMWRNQEFHDFVEWLRKYNSNIPSKSNYVGLYGLDLY SLYQSIDNVIRYLDLNHPHLAELARQSYNCLMVWQGSPSDYGLAVLQGENKDCREEALSVLRKLLEVQVAKGLFSEDEEV LDAIQNALLVVNAEKYYRIMWGSSTSSWNLRDGHMFETLNLLLSVKGEGAKAIVWEHNSHVGNAKATEMQARGEINVGQL CKEHYGDAAYLVGFGTHEGTVAAAASWGGPMKIKKVLNSHKESYERLFHETGVGKFFLPLLSPYQKKVRQGLMMPMLERA IGVIYRPDTERFSHYFHAILPEQFDEYIWFDQTRAITPLSLTAPQGMPDTYPFGL
Specific function: Unknown
COG id: COG2312
COG function: function code R; Erythromycin esterase homolog
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: In the N-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007815 - InterPro: IPR000836 [H]
Pfam domain/function: PF05139 Erythro_esteras; PF00156 Pribosyltran [H]
EC number: NA
Molecular weight: Translated: 51895; Mature: 51763
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRMKASANRQVKILQEVFMIDQTELINQIREEAIVFDEISTAPLSDFLNRVGDARVVLL CCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEE GEATHGTSEFYQMRAQLTQALIAQRGFNIVAIEADWPDAALVNRYVGHVSGGVPEHKAFN ECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCHHHHH RFPQWMWRNQEFHDFVEWLRKYNSNIPSKSNYVGLYGLDLYSLYQSIDNVIRYLDLNHPH HHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCH LAELARQSYNCLMVWQGSPSDYGLAVLQGENKDCREEALSVLRKLLEVQVAKGLFSEDEE HHHHHHCCCCEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHH VLDAIQNALLVVNAEKYYRIMWGSSTSSWNLRDGHMFETLNLLLSVKGEGAKAIVWEHNS HHHHHHHHEEEEECCCEEEEEECCCCCCCCCCCCHHHHHHHHHHEECCCCCEEEEEECCC HVGNAKATEMQARGEINVGQLCKEHYGDAAYLVGFGTHEGTVAAAASWGGPMKIKKVLNS CCCCCHHHHHHHCCCCCHHHHHHHHCCCEEEEEEECCCCCCEEEECCCCCHHHHHHHHHH HKESYERLFHETGVGKFFLPLLSPYQKKVRQGLMMPMLERAIGVIYRPDTERFSHYFHAI HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCHHHHHHHHHHH LPEQFDEYIWFDQTRAITPLSLTAPQGMPDTYPFGL HHHHHHHHEEECCCCCCCCEEECCCCCCCCCCCCCC >Mature Secondary Structure SRMKASANRQVKILQEVFMIDQTELINQIREEAIVFDEISTAPLSDFLNRVGDARVVLL CCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEE GEATHGTSEFYQMRAQLTQALIAQRGFNIVAIEADWPDAALVNRYVGHVSGGVPEHKAFN ECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCHHHHH RFPQWMWRNQEFHDFVEWLRKYNSNIPSKSNYVGLYGLDLYSLYQSIDNVIRYLDLNHPH HHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCH LAELARQSYNCLMVWQGSPSDYGLAVLQGENKDCREEALSVLRKLLEVQVAKGLFSEDEE HHHHHHCCCCEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHH VLDAIQNALLVVNAEKYYRIMWGSSTSSWNLRDGHMFETLNLLLSVKGEGAKAIVWEHNS HHHHHHHHEEEEECCCEEEEEECCCCCCCCCCCCHHHHHHHHHHEECCCCCEEEEEECCC HVGNAKATEMQARGEINVGQLCKEHYGDAAYLVGFGTHEGTVAAAASWGGPMKIKKVLNS CCCCCHHHHHHHCCCCCHHHHHHHHCCCEEEEEEECCCCCCEEEECCCCCHHHHHHHHHH HKESYERLFHETGVGKFFLPLLSPYQKKVRQGLMMPMLERAIGVIYRPDTERFSHYFHAI HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCHHHHHHHHHHH LPEQFDEYIWFDQTRAITPLSLTAPQGMPDTYPFGL HHHHHHHHEEECCCCCCCCEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]