Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446480

Identifier: 46446480

GI number: 46446480

Start: 1030508

End: 1031125

Strand: Direct

Name: 46446480

Synonym: pc0846

Alternate gene names: NA

Gene position: 1030508-1031125 (Clockwise)

Preceding gene: 46446479

Following gene: 46446483

Centisome position: 42.68

GC content: 49.35

Gene sequence:

>618_bases
GTGATCATGCCGGATGCTAGAGGCCACGGTAACTCTAGCGCCACGAACCAAGGCTACTCCTATGATAACCTTGCCCTTGA
TGTCTTGAGTTTTATCGAAGCCCTCAGACTCACCAACCCAGTGCTACTTGGCCACTCTATGGGAGGCTTGACAGCGGCCA
TGGTTGCCGGTCAGAACCCCAAACGACTGCGAGGGCTTATCCTGGCTGACCCAACTTTTCTAACGCCGCAGCGTCAACAA
GAAGTTTACGTGAGTGATGTTGCAGCTCAGCACTATCGAATTCACAATCGATATAGAGAAGATTTTTTGTCCGAGTTTCG
AACTCGACATAGCCACCGCTCTCCTGAATTTATTGAATTATTCGTGCAGGCAAGATTTCAAACCAGCATTTATGCCTTCG
GCATTTTGACCCCGCCGAATCCTGATTACAGTCAGCTAATCTGCACTTTTGCTATTCCTAGCTTGCTCATCATTGGGGGT
GTTGGCGGTGTTGTCTCTCCCGTGCTTGCCGCAAAACTTGCTAGGCTCAATCAACGTTTGGGGATTGTACAGATCGAGAA
AGCAGGCCATGGGATTCCTTATGACCAGCCCAAACAGTGGCAGGGATACCTTAGATAA

Upstream 100 bases:

>100_bases
AACCGGCGGCGACAAACCGCCTGTTGTTTTGCTGCATGGATTAACGATGAATGGAGCGTGCTGAGCTCCTTTGGCGCGAG
CGCTGGAGGAAGATTACGAT

Downstream 100 bases:

>100_bases
AAAATTGTTTCAAGAAGACTGTAACTTGCATTCCGTACCCCTTAAGCGGCTGAATACATTTTTTCAAATGGGGGGCCTAA
AAGTGACAACACATGGCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MIMPDARGHGNSSATNQGYSYDNLALDVLSFIEALRLTNPVLLGHSMGGLTAAMVAGQNPKRLRGLILADPTFLTPQRQQ
EVYVSDVAAQHYRIHNRYREDFLSEFRTRHSHRSPEFIELFVQARFQTSIYAFGILTPPNPDYSQLICTFAIPSLLIIGG
VGGVVSPVLAAKLARLNQRLGIVQIEKAGHGIPYDQPKQWQGYLR

Sequences:

>Translated_205_residues
MIMPDARGHGNSSATNQGYSYDNLALDVLSFIEALRLTNPVLLGHSMGGLTAAMVAGQNPKRLRGLILADPTFLTPQRQQ
EVYVSDVAAQHYRIHNRYREDFLSEFRTRHSHRSPEFIELFVQARFQTSIYAFGILTPPNPDYSQLICTFAIPSLLIIGG
VGGVVSPVLAAKLARLNQRLGIVQIEKAGHGIPYDQPKQWQGYLR
>Mature_205_residues
MIMPDARGHGNSSATNQGYSYDNLALDVLSFIEALRLTNPVLLGHSMGGLTAAMVAGQNPKRLRGLILADPTFLTPQRQQ
EVYVSDVAAQHYRIHNRYREDFLSEFRTRHSHRSPEFIELFVQARFQTSIYAFGILTPPNPDYSQLICTFAIPSLLIIGG
VGGVVSPVLAAKLARLNQRLGIVQIEKAGHGIPYDQPKQWQGYLR

Specific function: Unknown

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22832; Mature: 22832

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIMPDARGHGNSSATNQGYSYDNLALDVLSFIEALRLTNPVLLGHSMGGLTAAMVAGQNP
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHCCCCH
KRLRGLILADPTFLTPQRQQEVYVSDVAAQHYRIHNRYREDFLSEFRTRHSHRSPEFIEL
HHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
FVQARFQTSIYAFGILTPPNPDYSQLICTFAIPSLLIIGGVGGVVSPVLAAKLARLNQRL
HHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
GIVQIEKAGHGIPYDQPKQWQGYLR
CEEEEECCCCCCCCCCCCCHHCCCC
>Mature Secondary Structure
MIMPDARGHGNSSATNQGYSYDNLALDVLSFIEALRLTNPVLLGHSMGGLTAAMVAGQNP
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHCCCCH
KRLRGLILADPTFLTPQRQQEVYVSDVAAQHYRIHNRYREDFLSEFRTRHSHRSPEFIEL
HHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
FVQARFQTSIYAFGILTPPNPDYSQLICTFAIPSLLIIGGVGGVVSPVLAAKLARLNQRL
HHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
GIVQIEKAGHGIPYDQPKQWQGYLR
CEEEEECCCCCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA