| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446480
Identifier: 46446480
GI number: 46446480
Start: 1030508
End: 1031125
Strand: Direct
Name: 46446480
Synonym: pc0846
Alternate gene names: NA
Gene position: 1030508-1031125 (Clockwise)
Preceding gene: 46446479
Following gene: 46446483
Centisome position: 42.68
GC content: 49.35
Gene sequence:
>618_bases GTGATCATGCCGGATGCTAGAGGCCACGGTAACTCTAGCGCCACGAACCAAGGCTACTCCTATGATAACCTTGCCCTTGA TGTCTTGAGTTTTATCGAAGCCCTCAGACTCACCAACCCAGTGCTACTTGGCCACTCTATGGGAGGCTTGACAGCGGCCA TGGTTGCCGGTCAGAACCCCAAACGACTGCGAGGGCTTATCCTGGCTGACCCAACTTTTCTAACGCCGCAGCGTCAACAA GAAGTTTACGTGAGTGATGTTGCAGCTCAGCACTATCGAATTCACAATCGATATAGAGAAGATTTTTTGTCCGAGTTTCG AACTCGACATAGCCACCGCTCTCCTGAATTTATTGAATTATTCGTGCAGGCAAGATTTCAAACCAGCATTTATGCCTTCG GCATTTTGACCCCGCCGAATCCTGATTACAGTCAGCTAATCTGCACTTTTGCTATTCCTAGCTTGCTCATCATTGGGGGT GTTGGCGGTGTTGTCTCTCCCGTGCTTGCCGCAAAACTTGCTAGGCTCAATCAACGTTTGGGGATTGTACAGATCGAGAA AGCAGGCCATGGGATTCCTTATGACCAGCCCAAACAGTGGCAGGGATACCTTAGATAA
Upstream 100 bases:
>100_bases AACCGGCGGCGACAAACCGCCTGTTGTTTTGCTGCATGGATTAACGATGAATGGAGCGTGCTGAGCTCCTTTGGCGCGAG CGCTGGAGGAAGATTACGAT
Downstream 100 bases:
>100_bases AAAATTGTTTCAAGAAGACTGTAACTTGCATTCCGTACCCCTTAAGCGGCTGAATACATTTTTTCAAATGGGGGGCCTAA AAGTGACAACACATGGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MIMPDARGHGNSSATNQGYSYDNLALDVLSFIEALRLTNPVLLGHSMGGLTAAMVAGQNPKRLRGLILADPTFLTPQRQQ EVYVSDVAAQHYRIHNRYREDFLSEFRTRHSHRSPEFIELFVQARFQTSIYAFGILTPPNPDYSQLICTFAIPSLLIIGG VGGVVSPVLAAKLARLNQRLGIVQIEKAGHGIPYDQPKQWQGYLR
Sequences:
>Translated_205_residues MIMPDARGHGNSSATNQGYSYDNLALDVLSFIEALRLTNPVLLGHSMGGLTAAMVAGQNPKRLRGLILADPTFLTPQRQQ EVYVSDVAAQHYRIHNRYREDFLSEFRTRHSHRSPEFIELFVQARFQTSIYAFGILTPPNPDYSQLICTFAIPSLLIIGG VGGVVSPVLAAKLARLNQRLGIVQIEKAGHGIPYDQPKQWQGYLR >Mature_205_residues MIMPDARGHGNSSATNQGYSYDNLALDVLSFIEALRLTNPVLLGHSMGGLTAAMVAGQNPKRLRGLILADPTFLTPQRQQ EVYVSDVAAQHYRIHNRYREDFLSEFRTRHSHRSPEFIELFVQARFQTSIYAFGILTPPNPDYSQLICTFAIPSLLIIGG VGGVVSPVLAAKLARLNQRLGIVQIEKAGHGIPYDQPKQWQGYLR
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22832; Mature: 22832
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIMPDARGHGNSSATNQGYSYDNLALDVLSFIEALRLTNPVLLGHSMGGLTAAMVAGQNP CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHCCCCH KRLRGLILADPTFLTPQRQQEVYVSDVAAQHYRIHNRYREDFLSEFRTRHSHRSPEFIEL HHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH FVQARFQTSIYAFGILTPPNPDYSQLICTFAIPSLLIIGGVGGVVSPVLAAKLARLNQRL HHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC GIVQIEKAGHGIPYDQPKQWQGYLR CEEEEECCCCCCCCCCCCCHHCCCC >Mature Secondary Structure MIMPDARGHGNSSATNQGYSYDNLALDVLSFIEALRLTNPVLLGHSMGGLTAAMVAGQNP CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHCCCCH KRLRGLILADPTFLTPQRQQEVYVSDVAAQHYRIHNRYREDFLSEFRTRHSHRSPEFIEL HHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH FVQARFQTSIYAFGILTPPNPDYSQLICTFAIPSLLIIGGVGGVVSPVLAAKLARLNQRL HHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC GIVQIEKAGHGIPYDQPKQWQGYLR CEEEEECCCCCCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA