| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446446
Identifier: 46446446
GI number: 46446446
Start: 993803
End: 994885
Strand: Reverse
Name: 46446446
Synonym: pc0812
Alternate gene names: NA
Gene position: 994885-993803 (Counterclockwise)
Preceding gene: 46446449
Following gene: 46446445
Centisome position: 41.21
GC content: 34.63
Gene sequence:
>1083_bases ATGCATACACAATTAACGTCGACTTCAAATTCATTTAGCCAGCGAAATTTTTGGATTGTAAGCTTGTCTTTAATTTCCGG CCTTATTTTATCTATTTTATCTTGGCTTGAGCTATGCGTTGAACATTGTTCTGCTAATCAGGAATATCGACTTTTTGGAA TGCCATTCGCGTTAGCAGGAATGGCTTTTTTTCCTGTTATGCTAGCGATTCATTTTTTCTCTAAAAAATTTCCTAGTCTT TCAAAATTAACAAGTTGGTCTCTAGCTGCTGCATTTGGCGCTGAAATCATGTTTATTTTGATTCAAAAATATGAGATAAG ACATTGGTGCCCAGTTTGCCTAGGCATTGCACTTACGGTAACTATCGCTTGCATCGCAAGAGCCCTCCCTTACTTTAAAA CTTTTTACTCTGCTATTCAGCAAGGGGAATTTATGACTAAAATCAAACAAGGTTTGCTCTCTTTATCATTTATCATTTTA GGATTTCTCATGGCATTTGTAGGGATCTCAAAAGTTGATGCGGCAGAAGATGCTATTGCGGATATGAAAAATCGCTTAAT GTTTGGCTCTAAAACAAGCCCCGTTGAAGTTTATTTTGTCACCGATTGGTTTTGCCCTTCATGCAAAAAAATCGAAACGC AAATAGAAAAAATTTTGCCAGACATCCAAAATCAAGCTGCCTTATTTTTCGTGGATTACCCAATTCATAATAAAAGTATG AATTATACTCCCTATAACTTAGCTTTTTTAGTAAATGCTAAATCCAATTATTTAAAAGCCAGAGAAGTTCTCTCTCAGCT AACTGAAAAAACAGAAACTCCTCATGACAATGATGTTGTTAAGGCTGTTAAAGCTTATCACATTCCCTTTAAAGAATTGA GTTTCTTAGATGTTAAAGCTGGAATGGAATTTTTTGATAAGGTTGTTAAAAAATATGACCTTTCCGCTACACCAACGATT ATTGTTACTAACACAAAAACGAATCAAGTCATCAAATTCGAAGGAACTGATGAAATTAGTGATCAGAACGTGTTAAATGC TATTCAGACTTTAAGCCAAAGTCATGAAGAAACTAGTAAATAA
Upstream 100 bases:
>100_bases TGTTGCGTGATTACTAATAATGATAAAGTTTAAGTTTAAAATTATAAAATCACTGTATACGAAATACAAGTACCAATCTA ATTTTTAGTAGGTTAATGCA
Downstream 100 bases:
>100_bases ATATGATTAACAATTTAATAAAAAAGCTACTGAAATAAAACAGCTATGGATGAAAATTTTTTATCACATATTGAAGCCCA ACTTGAAGATTTAAAAACAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MHTQLTSTSNSFSQRNFWIVSLSLISGLILSILSWLELCVEHCSANQEYRLFGMPFALAGMAFFPVMLAIHFFSKKFPSL SKLTSWSLAAAFGAEIMFILIQKYEIRHWCPVCLGIALTVTIACIARALPYFKTFYSAIQQGEFMTKIKQGLLSLSFIIL GFLMAFVGISKVDAAEDAIADMKNRLMFGSKTSPVEVYFVTDWFCPSCKKIETQIEKILPDIQNQAALFFVDYPIHNKSM NYTPYNLAFLVNAKSNYLKAREVLSQLTEKTETPHDNDVVKAVKAYHIPFKELSFLDVKAGMEFFDKVVKKYDLSATPTI IVTNTKTNQVIKFEGTDEISDQNVLNAIQTLSQSHEETSK
Sequences:
>Translated_360_residues MHTQLTSTSNSFSQRNFWIVSLSLISGLILSILSWLELCVEHCSANQEYRLFGMPFALAGMAFFPVMLAIHFFSKKFPSL SKLTSWSLAAAFGAEIMFILIQKYEIRHWCPVCLGIALTVTIACIARALPYFKTFYSAIQQGEFMTKIKQGLLSLSFIIL GFLMAFVGISKVDAAEDAIADMKNRLMFGSKTSPVEVYFVTDWFCPSCKKIETQIEKILPDIQNQAALFFVDYPIHNKSM NYTPYNLAFLVNAKSNYLKAREVLSQLTEKTETPHDNDVVKAVKAYHIPFKELSFLDVKAGMEFFDKVVKKYDLSATPTI IVTNTKTNQVIKFEGTDEISDQNVLNAIQTLSQSHEETSK >Mature_360_residues MHTQLTSTSNSFSQRNFWIVSLSLISGLILSILSWLELCVEHCSANQEYRLFGMPFALAGMAFFPVMLAIHFFSKKFPSL SKLTSWSLAAAFGAEIMFILIQKYEIRHWCPVCLGIALTVTIACIARALPYFKTFYSAIQQGEFMTKIKQGLLSLSFIIL GFLMAFVGISKVDAAEDAIADMKNRLMFGSKTSPVEVYFVTDWFCPSCKKIETQIEKILPDIQNQAALFFVDYPIHNKSM NYTPYNLAFLVNAKSNYLKAREVLSQLTEKTETPHDNDVVKAVKAYHIPFKELSFLDVKAGMEFFDKVVKKYDLSATPTI IVTNTKTNQVIKFEGTDEISDQNVLNAIQTLSQSHEETSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40678; Mature: 40678
Theoretical pI: Translated: 7.80; Mature: 7.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTQLTSTSNSFSQRNFWIVSLSLISGLILSILSWLELCVEHCSANQEYRLFGMPFALAG CCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHH MAFFPVMLAIHFFSKKFPSLSKLTSWSLAAAFGAEIMFILIQKYEIRHWCPVCLGIALTV HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TIACIARALPYFKTFYSAIQQGEFMTKIKQGLLSLSFIILGFLMAFVGISKVDAAEDAIA HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH DMKNRLMFGSKTSPVEVYFVTDWFCPSCKKIETQIEKILPDIQNQAALFFVDYPIHNKSM HHHHHEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCC NYTPYNLAFLVNAKSNYLKAREVLSQLTEKTETPHDNDVVKAVKAYHIPFKELSFLDVKA CCCCEEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHH GMEFFDKVVKKYDLSATPTIIVTNTKTNQVIKFEGTDEISDQNVLNAIQTLSQSHEETSK HHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MHTQLTSTSNSFSQRNFWIVSLSLISGLILSILSWLELCVEHCSANQEYRLFGMPFALAG CCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHH MAFFPVMLAIHFFSKKFPSLSKLTSWSLAAAFGAEIMFILIQKYEIRHWCPVCLGIALTV HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TIACIARALPYFKTFYSAIQQGEFMTKIKQGLLSLSFIILGFLMAFVGISKVDAAEDAIA HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH DMKNRLMFGSKTSPVEVYFVTDWFCPSCKKIETQIEKILPDIQNQAALFFVDYPIHNKSM HHHHHEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCC NYTPYNLAFLVNAKSNYLKAREVLSQLTEKTETPHDNDVVKAVKAYHIPFKELSFLDVKA CCCCEEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHH GMEFFDKVVKKYDLSATPTIIVTNTKTNQVIKFEGTDEISDQNVLNAIQTLSQSHEETSK HHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA