| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446420
Identifier: 46446420
GI number: 46446420
Start: 966897
End: 967214
Strand: Reverse
Name: 46446420
Synonym: pc0786
Alternate gene names: NA
Gene position: 967214-966897 (Counterclockwise)
Preceding gene: 46446424
Following gene: 46446419
Centisome position: 40.06
GC content: 32.08
Gene sequence:
>318_bases ATGAGCCAAGATTTCATTCAATTGCCAGAATTATCCGAAATTAAAGAAGATTTAGTTTTAGCGAGACAAGATATCAGTTC AGCTGTTCAAGAAGATGACTCTTTAGAACCTATTGGTAAATTTGTTGAAGAAGTGATCACAATTATTGAAAATAAAGCCT CTTCTCTTTCAGCTGGTAAGCCATTAGATACAAAAACTAAAGTAGATATTGCTGCTCACTTAACCTTACTAAATAGTTTA ATGGACGAAATTTTTTTGAGTAATTTAGAAGATGAATTTACTGAAGAAGAAGAAGTTGAAAGCGAAGACGATCGCTAA
Upstream 100 bases:
>100_bases TTGACCAGAGAAATGATTTCTGCAAATGATAAGGTTAAAAGAACACAGAATGAATAAAAAATTTTAGCAATCACCCATTT TTAAAGGACGGTGTATATTT
Downstream 100 bases:
>100_bases TATTTTTTTATTTGAAATGAATCTGAGTATGGGAATCTGCATTCCCTACTCTTATCCTTACATTTCCTACCTAACCGCAC AATTTTACATTTATTTATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 105; Mature: 104
Protein sequence:
>105_residues MSQDFIQLPELSEIKEDLVLARQDISSAVQEDDSLEPIGKFVEEVITIIENKASSLSAGKPLDTKTKVDIAAHLTLLNSL MDEIFLSNLEDEFTEEEEVESEDDR
Sequences:
>Translated_105_residues MSQDFIQLPELSEIKEDLVLARQDISSAVQEDDSLEPIGKFVEEVITIIENKASSLSAGKPLDTKTKVDIAAHLTLLNSL MDEIFLSNLEDEFTEEEEVESEDDR >Mature_104_residues SQDFIQLPELSEIKEDLVLARQDISSAVQEDDSLEPIGKFVEEVITIIENKASSLSAGKPLDTKTKVDIAAHLTLLNSLM DEIFLSNLEDEFTEEEEVESEDDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11783; Mature: 11652
Theoretical pI: Translated: 3.72; Mature: 3.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQDFIQLPELSEIKEDLVLARQDISSAVQEDDSLEPIGKFVEEVITIIENKASSLSAGK CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC PLDTKTKVDIAAHLTLLNSLMDEIFLSNLEDEFTEEEEVESEDDR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCC >Mature Secondary Structure SQDFIQLPELSEIKEDLVLARQDISSAVQEDDSLEPIGKFVEEVITIIENKASSLSAGK CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC PLDTKTKVDIAAHLTLLNSLMDEIFLSNLEDEFTEEEEVESEDDR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA