Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446420

Identifier: 46446420

GI number: 46446420

Start: 966897

End: 967214

Strand: Reverse

Name: 46446420

Synonym: pc0786

Alternate gene names: NA

Gene position: 967214-966897 (Counterclockwise)

Preceding gene: 46446424

Following gene: 46446419

Centisome position: 40.06

GC content: 32.08

Gene sequence:

>318_bases
ATGAGCCAAGATTTCATTCAATTGCCAGAATTATCCGAAATTAAAGAAGATTTAGTTTTAGCGAGACAAGATATCAGTTC
AGCTGTTCAAGAAGATGACTCTTTAGAACCTATTGGTAAATTTGTTGAAGAAGTGATCACAATTATTGAAAATAAAGCCT
CTTCTCTTTCAGCTGGTAAGCCATTAGATACAAAAACTAAAGTAGATATTGCTGCTCACTTAACCTTACTAAATAGTTTA
ATGGACGAAATTTTTTTGAGTAATTTAGAAGATGAATTTACTGAAGAAGAAGAAGTTGAAAGCGAAGACGATCGCTAA

Upstream 100 bases:

>100_bases
TTGACCAGAGAAATGATTTCTGCAAATGATAAGGTTAAAAGAACACAGAATGAATAAAAAATTTTAGCAATCACCCATTT
TTAAAGGACGGTGTATATTT

Downstream 100 bases:

>100_bases
TATTTTTTTATTTGAAATGAATCTGAGTATGGGAATCTGCATTCCCTACTCTTATCCTTACATTTCCTACCTAACCGCAC
AATTTTACATTTATTTATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 104

Protein sequence:

>105_residues
MSQDFIQLPELSEIKEDLVLARQDISSAVQEDDSLEPIGKFVEEVITIIENKASSLSAGKPLDTKTKVDIAAHLTLLNSL
MDEIFLSNLEDEFTEEEEVESEDDR

Sequences:

>Translated_105_residues
MSQDFIQLPELSEIKEDLVLARQDISSAVQEDDSLEPIGKFVEEVITIIENKASSLSAGKPLDTKTKVDIAAHLTLLNSL
MDEIFLSNLEDEFTEEEEVESEDDR
>Mature_104_residues
SQDFIQLPELSEIKEDLVLARQDISSAVQEDDSLEPIGKFVEEVITIIENKASSLSAGKPLDTKTKVDIAAHLTLLNSLM
DEIFLSNLEDEFTEEEEVESEDDR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11783; Mature: 11652

Theoretical pI: Translated: 3.72; Mature: 3.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQDFIQLPELSEIKEDLVLARQDISSAVQEDDSLEPIGKFVEEVITIIENKASSLSAGK
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
PLDTKTKVDIAAHLTLLNSLMDEIFLSNLEDEFTEEEEVESEDDR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCC
>Mature Secondary Structure 
SQDFIQLPELSEIKEDLVLARQDISSAVQEDDSLEPIGKFVEEVITIIENKASSLSAGK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
PLDTKTKVDIAAHLTLLNSLMDEIFLSNLEDEFTEEEEVESEDDR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA