| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446357
Identifier: 46446357
GI number: 46446357
Start: 877783
End: 878289
Strand: Reverse
Name: 46446357
Synonym: pc0723
Alternate gene names: NA
Gene position: 878289-877783 (Counterclockwise)
Preceding gene: 46446362
Following gene: 46446356
Centisome position: 36.38
GC content: 35.31
Gene sequence:
>507_bases ATGCCCATGCTCCCTGCTGCAATAGGAATAGTTTTAGATCAAACTGAAAAAAAAATTTTATTGGTTAAAAGAAAAGATGT GCCAGTTTGGGTGCTTCCAGGTGGTGGAATTGAAATAGGAGAAAAGCCTTTTGATGCTGTCTTGAGAGAAATTTGGGAAG AAACCAATCTGAAGGTCAAAGTCATGAGGCAGGTTGCTGAATATACACCAATTAATCGTTTAGCAACCTTGACTTTTGTT TTTCTTTGCAAATTGAGAGAAGGAACCCCTCAGCTATCAAATGAAACAAGTGATATTGCCTTTTTTTCCATTGATGCACT TCCTTCTAGCTTATTTAATCCTCATCGAGACTGGATAAACGAGGGTTTAAAAACAAAATCTTTAGTTAAAAAACCTCTTA CTCAAATTACGTATTGGGCAACCTTTAAGTATTTTTTTCAACACCCACTTTTTTTACTTAAATATGCTTGGACTAGATGG GTTAAAAATAGACACGAACGAAACTAA
Upstream 100 bases:
>100_bases CCTGATTCCACGAGGAAAACTGTCAATACAACAATTCAAATTAGTAATATTTTCAACAAAAGTATAAAATATACATTTTT TATTTACCTAAGATAAGTGT
Downstream 100 bases:
>100_bases AGTGACTCAACGCAAGTTTTATCATTTGACAAACCTCTTCCAAAAGAAATAAACTCTGTTCATTAACTATCATTCTTGAA GGCATTGATGCGAACTTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MPMLPAAIGIVLDQTEKKILLVKRKDVPVWVLPGGGIEIGEKPFDAVLREIWEETNLKVKVMRQVAEYTPINRLATLTFV FLCKLREGTPQLSNETSDIAFFSIDALPSSLFNPHRDWINEGLKTKSLVKKPLTQITYWATFKYFFQHPLFLLKYAWTRW VKNRHERN
Sequences:
>Translated_168_residues MPMLPAAIGIVLDQTEKKILLVKRKDVPVWVLPGGGIEIGEKPFDAVLREIWEETNLKVKVMRQVAEYTPINRLATLTFV FLCKLREGTPQLSNETSDIAFFSIDALPSSLFNPHRDWINEGLKTKSLVKKPLTQITYWATFKYFFQHPLFLLKYAWTRW VKNRHERN >Mature_167_residues PMLPAAIGIVLDQTEKKILLVKRKDVPVWVLPGGGIEIGEKPFDAVLREIWEETNLKVKVMRQVAEYTPINRLATLTFVF LCKLREGTPQLSNETSDIAFFSIDALPSSLFNPHRDWINEGLKTKSLVKKPLTQITYWATFKYFFQHPLFLLKYAWTRWV KNRHERN
Specific function: Unknown
COG id: COG1051
COG function: function code F; ADP-ribose pyrophosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 nudix hydrolase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006357 - InterPro: IPR023215 - InterPro: IPR020476 - InterPro: IPR020084 - InterPro: IPR000086 - InterPro: IPR015797 [H]
Pfam domain/function: PF00702 Hydrolase; PF00293 NUDIX [H]
EC number: NA
Molecular weight: Translated: 19587; Mature: 19456
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMLPAAIGIVLDQTEKKILLVKRKDVPVWVLPGGGIEIGEKPFDAVLREIWEETNLKVK CCCCHHHHHHHHCCCCCEEEEEEECCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCHHH VMRQVAEYTPINRLATLTFVFLCKLREGTPQLSNETSDIAFFSIDALPSSLFNPHRDWIN HHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHCCHHHCCCCHHHHH EGLKTKSLVKKPLTQITYWATFKYFFQHPLFLLKYAWTRWVKNRHERN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PMLPAAIGIVLDQTEKKILLVKRKDVPVWVLPGGGIEIGEKPFDAVLREIWEETNLKVK CCCHHHHHHHHCCCCCEEEEEEECCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCHHH VMRQVAEYTPINRLATLTFVFLCKLREGTPQLSNETSDIAFFSIDALPSSLFNPHRDWIN HHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHCCHHHCCCCHHHHH EGLKTKSLVKKPLTQITYWATFKYFFQHPLFLLKYAWTRWVKNRHERN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8631946 [H]