| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
Click here to switch to the map view.
The map label for this gene is 46446333
Identifier: 46446333
GI number: 46446333
Start: 851359
End: 852702
Strand: Reverse
Name: 46446333
Synonym: pc0699
Alternate gene names: NA
Gene position: 852702-851359 (Counterclockwise)
Preceding gene: 46446334
Following gene: 46446332
Centisome position: 35.32
GC content: 32.59
Gene sequence:
>1344_bases ATGTATGTGACACATAATCATAATCCCTGTTTCTTGCGTATTAATGATGAGATAAAAATAGATATCAATAGCGATTGGAA AGTTCGTAATTTTTGGACAGTCAATGAAAAAAAGATTAGCTTATTTACGAAAGATGATCAGTTGAAATGCAAAACTTGTG ACGCTGCTGGTAAAAAAATCACAACTGATATTTTAAAGCTGCAACCAGAAGCTGAACAAATTTCAAAAAAAAACACCATC TCTTACGTTTTTGAGTGTAAAGCCGCCTTAGAAGATGATAATACTATAAGTTTTTCGAAGCCAATTTTAACACAAACATT TGGCAAGAAAGAGATTACTTTGCTACGTAGAAAAAATGATTTTGTTTGGCAATTATTTTATAAAAACTTGAAAATAAGTA TTCAGGTTCCGGTTGAGCGCATAACATGTTCTAGTCAATGCAGCATGGAAACTGTGCATAAGGTTAAAACAGTAAGAGAA GGACTAAGTTTAGAAGAACAAAGCAAATTTTTTAGTAAATTTTTTACTGTTTTTAATTGCTCAGACCATAAAAAATTAGC AAAAGAAATTGCAGTTTGGCAAATTATTGAAGAAAAAGAATTTGAATCAGTTAAAGATGCTGTAATTGTAAATACAGCTG TAGGATCCATTGTTAGTTTAGGGACTTTGCTTTTTTCTCCTAGTAACGCTGCCCTATTTAGTATATTAGCGACTATACGA GCAGCTCATAACTCTTATCGCAACTTTAGGGAATATAAGAATAGAATTAAAATTCAAAGGGATAGATATAGTGCTGAATT CACTAAGATAGAAGAACAATTAAAGAATGTGAATTTTACAGTTGAAATAGAACCTTATAACGCTCCAAGTCAGCTTGATG AACGAGTAAGGGTAAGTTCGTTTCAATGGGCTGTCACTTTGATTACTAATAATGGAATACTTGGTAATCATGCACTAATT TGCTTTGAAGGGATAACAGAAGGCAACTATTTTGCAAAACTTGGCGAATTTACTGGTTTAAGAGTACGACTTAATAGGGA TGTTAAAAAAGTTGAATTTCAAACACGATCTGTAATTTGGATGAAACAAAGTGAAGAAGTCCAAAAAGTCATTGATATCA TTGATGAAGAAGACAGGAATCGGGTTGTTATTCCTTATTCCTACTGCGGCGAAAGTTCTATAATGGGAGGAAATTCGAAT TGTCTGGATTGGGCGCGGAAAAAATTACGTTTGTTAGATATTCAACTAGAAAAAAGTGCTTTTGAAAATCTTGCTGCCTT AGCTAAATTGTATACAAAACCACCTGAGTATTATTTTAACGAAAAAGTTGGGGTATCCCTTTAA
Upstream 100 bases:
>100_bases TTCACTGGCTCTTCCCTAAACAATGCTAAATTAATAAACCGTGATAAAAGAAACCTTTGCCTTTCAGGCAAAGGTTCATG ATGATAAGGAGAAATTTTTC
Downstream 100 bases:
>100_bases AATTATCAAAATAAAAATTTAATGGATCAAGCACATGCATTTAGAAAATAGTTTATATCAAACAGATAAATTTGTTGAAT TAGAACCAGTTATAGAACAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 447; Mature: 447
Protein sequence:
>447_residues MYVTHNHNPCFLRINDEIKIDINSDWKVRNFWTVNEKKISLFTKDDQLKCKTCDAAGKKITTDILKLQPEAEQISKKNTI SYVFECKAALEDDNTISFSKPILTQTFGKKEITLLRRKNDFVWQLFYKNLKISIQVPVERITCSSQCSMETVHKVKTVRE GLSLEEQSKFFSKFFTVFNCSDHKKLAKEIAVWQIIEEKEFESVKDAVIVNTAVGSIVSLGTLLFSPSNAALFSILATIR AAHNSYRNFREYKNRIKIQRDRYSAEFTKIEEQLKNVNFTVEIEPYNAPSQLDERVRVSSFQWAVTLITNNGILGNHALI CFEGITEGNYFAKLGEFTGLRVRLNRDVKKVEFQTRSVIWMKQSEEVQKVIDIIDEEDRNRVVIPYSYCGESSIMGGNSN CLDWARKKLRLLDIQLEKSAFENLAALAKLYTKPPEYYFNEKVGVSL
Sequences:
>Translated_447_residues MYVTHNHNPCFLRINDEIKIDINSDWKVRNFWTVNEKKISLFTKDDQLKCKTCDAAGKKITTDILKLQPEAEQISKKNTI SYVFECKAALEDDNTISFSKPILTQTFGKKEITLLRRKNDFVWQLFYKNLKISIQVPVERITCSSQCSMETVHKVKTVRE GLSLEEQSKFFSKFFTVFNCSDHKKLAKEIAVWQIIEEKEFESVKDAVIVNTAVGSIVSLGTLLFSPSNAALFSILATIR AAHNSYRNFREYKNRIKIQRDRYSAEFTKIEEQLKNVNFTVEIEPYNAPSQLDERVRVSSFQWAVTLITNNGILGNHALI CFEGITEGNYFAKLGEFTGLRVRLNRDVKKVEFQTRSVIWMKQSEEVQKVIDIIDEEDRNRVVIPYSYCGESSIMGGNSN CLDWARKKLRLLDIQLEKSAFENLAALAKLYTKPPEYYFNEKVGVSL >Mature_447_residues MYVTHNHNPCFLRINDEIKIDINSDWKVRNFWTVNEKKISLFTKDDQLKCKTCDAAGKKITTDILKLQPEAEQISKKNTI SYVFECKAALEDDNTISFSKPILTQTFGKKEITLLRRKNDFVWQLFYKNLKISIQVPVERITCSSQCSMETVHKVKTVRE GLSLEEQSKFFSKFFTVFNCSDHKKLAKEIAVWQIIEEKEFESVKDAVIVNTAVGSIVSLGTLLFSPSNAALFSILATIR AAHNSYRNFREYKNRIKIQRDRYSAEFTKIEEQLKNVNFTVEIEPYNAPSQLDERVRVSSFQWAVTLITNNGILGNHALI CFEGITEGNYFAKLGEFTGLRVRLNRDVKKVEFQTRSVIWMKQSEEVQKVIDIIDEEDRNRVVIPYSYCGESSIMGGNSN CLDWARKKLRLLDIQLEKSAFENLAALAKLYTKPPEYYFNEKVGVSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51631; Mature: 51631
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYVTHNHNPCFLRINDEIKIDINSDWKVRNFWTVNEKKISLFTKDDQLKCKTCDAAGKKI CEEECCCCEEEEEECCEEEEEECCCEEEEEEEEECCCEEEEEECCCCCEEEECCCCCCHH TTDILKLQPEAEQISKKNTISYVFECKAALEDDNTISFSKPILTQTFGKKEITLLRRKND EEHHHHCCCCHHHHCCCCCEEEEEEEEHHCCCCCEEEECCCHHHHHCCCCEEEEEECCCC FVWQLFYKNLKISIQVPVERITCSSQCSMETVHKVKTVREGLSLEEQSKFFSKFFTVFNC CEEEEEECCEEEEEEECHHEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC SDHKKLAKEIAVWQIIEEKEFESVKDAVIVNTAVGSIVSLGTLLFSPSNAALFSILATIR CCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHEECCCCHHHHHHHHHHH AAHNSYRNFREYKNRIKIQRDRYSAEFTKIEEQLKNVNFTVEIEPYNAPSQLDERVRVSS HHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCC FQWAVTLITNNGILGNHALICFEGITEGNYFAKLGEFTGLRVRLNRDVKKVEFQTRSVIW EEEEEEEEECCCEECCCEEEEEECCCCCCHHHHHCCCCCEEEEECCCCCCEEEEEEEEEE MKQSEEVQKVIDIIDEEDRNRVVIPYSYCGESSIMGGNSNCLDWARKKLRLLDIQLEKSA EECHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHEEEEEEEEHHHH FENLAALAKLYTKPPEYYFNEKVGVSL HHHHHHHHHHHCCCCCHHCCCCCCCCC >Mature Secondary Structure MYVTHNHNPCFLRINDEIKIDINSDWKVRNFWTVNEKKISLFTKDDQLKCKTCDAAGKKI CEEECCCCEEEEEECCEEEEEECCCEEEEEEEEECCCEEEEEECCCCCEEEECCCCCCHH TTDILKLQPEAEQISKKNTISYVFECKAALEDDNTISFSKPILTQTFGKKEITLLRRKND EEHHHHCCCCHHHHCCCCCEEEEEEEEHHCCCCCEEEECCCHHHHHCCCCEEEEEECCCC FVWQLFYKNLKISIQVPVERITCSSQCSMETVHKVKTVREGLSLEEQSKFFSKFFTVFNC CEEEEEECCEEEEEEECHHEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC SDHKKLAKEIAVWQIIEEKEFESVKDAVIVNTAVGSIVSLGTLLFSPSNAALFSILATIR CCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHEECCCCHHHHHHHHHHH AAHNSYRNFREYKNRIKIQRDRYSAEFTKIEEQLKNVNFTVEIEPYNAPSQLDERVRVSS HHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCC FQWAVTLITNNGILGNHALICFEGITEGNYFAKLGEFTGLRVRLNRDVKKVEFQTRSVIW EEEEEEEEECCCEECCCEEEEEECCCCCCHHHHHCCCCCEEEEECCCCCCEEEEEEEEEE MKQSEEVQKVIDIIDEEDRNRVVIPYSYCGESSIMGGNSNCLDWARKKLRLLDIQLEKSA EECHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHEEEEEEEEHHHH FENLAALAKLYTKPPEYYFNEKVGVSL HHHHHHHHHHHCCCCCHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA