| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446241
Identifier: 46446241
GI number: 46446241
Start: 747716
End: 749878
Strand: Reverse
Name: 46446241
Synonym: pc0607
Alternate gene names: NA
Gene position: 749878-747716 (Counterclockwise)
Preceding gene: 46446243
Following gene: 46446227
Centisome position: 31.06
GC content: 35.23
Gene sequence:
>2163_bases ATGTGTTTTCATCCCTTCATTTTATTTTTATCTCTTCTTCCATTTTTAGGGTTTTGCCTCTCCAATTATGCTGAAGAAAC CGTTAAAGTCGTACATGAGGGTTTTGCTGAAGGCATCACTGTCGACCTAAAAGAACCTCTTTATATAGATGGTGTTATGA CAACCAATCAAGGAGGGGTGATTTCTGCACCTCGCCTTCGTATCCAAGCAAAAGTCATCCGTTATACAAAAAAAATGATC GATAAAACTCCGATTTTAACAATTGAAGCAGAAGACCAGCTCATGATCGAATTTGGAGATTACCTATTTACAGGACAAAA ACTCTACTACGACTTTCAAAAAAAAGAAGGTTTTATTGAATATGGACGAACAGCGATAGAACCTTGGTTTTTCGGAGGCG AAAAAATTGAAATGCGCTGTGATGGTAGTTATGTTTTATATAATGGTTATATTACGACATCGGAAAACGAACAACCCGAA TGGGGTCTTTATTCAAATAATGTCTATGTCAAACAAGGACGACACCTGAAAGCTTATGATGTACAACTAAAACTCAAAAA ATACACTATTTTATGGATTCCTTCTTTAAGCGCTAACTTAGACTCTATTTTTGATTCCCCTATTCGTTATCGTTTTAGAT GGGGAGGAAGACAGGGGCCACGTATAGGACTTACTTACGAAATATTTTCTTGGAATCGTTGGAAAACATTTGTGCGATTT GATTATCGTTTAGCTAGAGGCCCAGGAGGAGGTATTGAAACAAGATATCATTCTGTTGATCGTAAAACGGAATTTCAAAG CATTAATTATTTAGCTAGAGATTCTTCTCTTTTGGACCCAAATGAAAAAGCCCGCTATCGTTTTGAAGGGTTATTTAAAA CACTCTTAGATCAAGATAAAGTAAGTATCTTAATGACTTATGACAAGATCAGTGATAGAGATATGCCAAGTAGTTACCAC GATAGAGATTTTGATTTTGATCCGTCAGAAAGAACACAAGTATTAATCAGAAGACAAGAAGATTCATGGATTGGAAATTT ATACACACGTTTGCGTATTAATAGTTTTCAAACCGTTAAACAAGAGCTTCCTACCCTGTCAGTAAACTTTAAGCCTTTCC CTTTGCAAAGAACGGGAATTATATTTGAAAATTGGGCTAGTGTTTCTTACTTAGATTTTAAGTACTCCAAACACATAGTG GATGTTCCTAATTATGCTTCCAATCGGTTTGAATATAGACCTACTTTATATCGACCATTCATTGCAGGCCCCGTAACTAT TACCCCTCAAATGGGTTTTATAGAGATTTTTTATGGAAATAGCCCGAAACATTCCTCTCAACTCCTTAGTTTGGGATTAG TCGGTTGTCGAGTTGAAACACAACTTTATAAACATCTGGGCGACTTTAAACATGTTGTTACCCCCTATTCATTTTTTCAC TACTATACCTCTCCTACTTCATCTCCCAATCAACATTACATTTTTGATATTACAGATGGTTGGGCTCGCTTAAACAAATT AACGATAGGTTTTAAAAATTCATTGTTATTAAAAGAACAAAACGGCATTTCACAACTTTTTTATGCAAATATTTATACTC ACGCTTTTTTCAACTCCAAAACGATTGCTCGAACTTTTCCCAAACTTTATGGGAAATTTGTCTTTTCCTCTATTTCTACT ATTAAACACACGATTCAAACAGCCTGGGATTTTCAACATCATCTATTTGATCATTTTAATTTTCGCTCTGAATGGACATT AAGCGCTGACTTTGCCTTAGCTATCGAGTATCGTCACAGAAGCGCTTATAGTTGGCGCAAAGTCGATGAAGGAAACTTTT TTCTTGATAGTTTTCGCTCTGAAAACAATTTATTTAATTCAGCTCTATCTGATAGACGAAATACTTTTTTACTTCATTTC TTCTATCGTTTTCATCCTAATTGGGCTTGCGAATTTTCTTCTAGACAAGGATGGAATCGAAAGAAAGAACCTAGTTATTT AGAATATGAAATCGATTTATTAACAACAATTCAGACGGCTTGGCATTTACGTCTTTCTTTTCAACATCGTGAAAATGACA ATCGTATAGCTCTGTACGTGAATGTAGGTTTAAGAAGGCCTGAAGGAAAGTACTGTGAACACAAAATTTATACGTTCGAT TAA
Upstream 100 bases:
>100_bases CATTTCTATCCATTTTACTCTGAAATAGGTCATTCTCACCTTTTGAGTTAATCGCTTTCATCGTATAATCTGCTCTTTTT ATCTTATCAAACGTATATCC
Downstream 100 bases:
>100_bases TTCTTAGTTATTTTAATTTTAAACAAATCAATAGTAATTTTAAAACATTTTTCTATATTTCTTAATATATATATATATAT TAAATAACTGCAATTATTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 720; Mature: 720
Protein sequence:
>720_residues MCFHPFILFLSLLPFLGFCLSNYAEETVKVVHEGFAEGITVDLKEPLYIDGVMTTNQGGVISAPRLRIQAKVIRYTKKMI DKTPILTIEAEDQLMIEFGDYLFTGQKLYYDFQKKEGFIEYGRTAIEPWFFGGEKIEMRCDGSYVLYNGYITTSENEQPE WGLYSNNVYVKQGRHLKAYDVQLKLKKYTILWIPSLSANLDSIFDSPIRYRFRWGGRQGPRIGLTYEIFSWNRWKTFVRF DYRLARGPGGGIETRYHSVDRKTEFQSINYLARDSSLLDPNEKARYRFEGLFKTLLDQDKVSILMTYDKISDRDMPSSYH DRDFDFDPSERTQVLIRRQEDSWIGNLYTRLRINSFQTVKQELPTLSVNFKPFPLQRTGIIFENWASVSYLDFKYSKHIV DVPNYASNRFEYRPTLYRPFIAGPVTITPQMGFIEIFYGNSPKHSSQLLSLGLVGCRVETQLYKHLGDFKHVVTPYSFFH YYTSPTSSPNQHYIFDITDGWARLNKLTIGFKNSLLLKEQNGISQLFYANIYTHAFFNSKTIARTFPKLYGKFVFSSIST IKHTIQTAWDFQHHLFDHFNFRSEWTLSADFALAIEYRHRSAYSWRKVDEGNFFLDSFRSENNLFNSALSDRRNTFLLHF FYRFHPNWACEFSSRQGWNRKKEPSYLEYEIDLLTTIQTAWHLRLSFQHRENDNRIALYVNVGLRRPEGKYCEHKIYTFD
Sequences:
>Translated_720_residues MCFHPFILFLSLLPFLGFCLSNYAEETVKVVHEGFAEGITVDLKEPLYIDGVMTTNQGGVISAPRLRIQAKVIRYTKKMI DKTPILTIEAEDQLMIEFGDYLFTGQKLYYDFQKKEGFIEYGRTAIEPWFFGGEKIEMRCDGSYVLYNGYITTSENEQPE WGLYSNNVYVKQGRHLKAYDVQLKLKKYTILWIPSLSANLDSIFDSPIRYRFRWGGRQGPRIGLTYEIFSWNRWKTFVRF DYRLARGPGGGIETRYHSVDRKTEFQSINYLARDSSLLDPNEKARYRFEGLFKTLLDQDKVSILMTYDKISDRDMPSSYH DRDFDFDPSERTQVLIRRQEDSWIGNLYTRLRINSFQTVKQELPTLSVNFKPFPLQRTGIIFENWASVSYLDFKYSKHIV DVPNYASNRFEYRPTLYRPFIAGPVTITPQMGFIEIFYGNSPKHSSQLLSLGLVGCRVETQLYKHLGDFKHVVTPYSFFH YYTSPTSSPNQHYIFDITDGWARLNKLTIGFKNSLLLKEQNGISQLFYANIYTHAFFNSKTIARTFPKLYGKFVFSSIST IKHTIQTAWDFQHHLFDHFNFRSEWTLSADFALAIEYRHRSAYSWRKVDEGNFFLDSFRSENNLFNSALSDRRNTFLLHF FYRFHPNWACEFSSRQGWNRKKEPSYLEYEIDLLTTIQTAWHLRLSFQHRENDNRIALYVNVGLRRPEGKYCEHKIYTFD >Mature_720_residues MCFHPFILFLSLLPFLGFCLSNYAEETVKVVHEGFAEGITVDLKEPLYIDGVMTTNQGGVISAPRLRIQAKVIRYTKKMI DKTPILTIEAEDQLMIEFGDYLFTGQKLYYDFQKKEGFIEYGRTAIEPWFFGGEKIEMRCDGSYVLYNGYITTSENEQPE WGLYSNNVYVKQGRHLKAYDVQLKLKKYTILWIPSLSANLDSIFDSPIRYRFRWGGRQGPRIGLTYEIFSWNRWKTFVRF DYRLARGPGGGIETRYHSVDRKTEFQSINYLARDSSLLDPNEKARYRFEGLFKTLLDQDKVSILMTYDKISDRDMPSSYH DRDFDFDPSERTQVLIRRQEDSWIGNLYTRLRINSFQTVKQELPTLSVNFKPFPLQRTGIIFENWASVSYLDFKYSKHIV DVPNYASNRFEYRPTLYRPFIAGPVTITPQMGFIEIFYGNSPKHSSQLLSLGLVGCRVETQLYKHLGDFKHVVTPYSFFH YYTSPTSSPNQHYIFDITDGWARLNKLTIGFKNSLLLKEQNGISQLFYANIYTHAFFNSKTIARTFPKLYGKFVFSSIST IKHTIQTAWDFQHHLFDHFNFRSEWTLSADFALAIEYRHRSAYSWRKVDEGNFFLDSFRSENNLFNSALSDRRNTFLLHF FYRFHPNWACEFSSRQGWNRKKEPSYLEYEIDLLTTIQTAWHLRLSFQHRENDNRIALYVNVGLRRPEGKYCEHKIYTFD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 85044; Mature: 85044
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCFHPFILFLSLLPFLGFCLSNYAEETVKVVHEGFAEGITVDLKEPLYIDGVMTTNQGGV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEEEEEECCCCE ISAPRLRIQAKVIRYTKKMIDKTPILTIEAEDQLMIEFGDYLFTGQKLYYDFQKKEGFIE EECCCEEHHHHHHHHHHHHHCCCCEEEEECCCEEEEEECCEEEECCEEEEEEHHCCCHHH YGRTAIEPWFFGGEKIEMRCDGSYVLYNGYITTSENEQPEWGLYSNNVYVKQGRHLKAYD HCCHHCCCEEECCCEEEEEECCCEEEEEEEEECCCCCCCCCCEEECCEEEECCCEEEEEE VQLKLKKYTILWIPSLSANLDSIFDSPIRYRFRWGGRQGPRIGLTYEIFSWNRWKTFVRF EEEEEEEEEEEEECCCCCCHHHHCCCCEEEEEEECCCCCCEEEEEEEEECCCCEEEEEEE DYRLARGPGGGIETRYHSVDRKTEFQSINYLARDSSLLDPNEKARYRFEGLFKTLLDQDK EEEEECCCCCCCCCCEECCCCCCHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHCCCC VSILMTYDKISDRDMPSSYHDRDFDFDPSERTQVLIRRQEDSWIGNLYTRLRINSFQTVK EEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHEEEEEEECHHHHHH QELPTLSVNFKPFPLQRTGIIFENWASVSYLDFKYSKHIVDVPNYASNRFEYRPTLYRPF HHCCEEEECCCCCCCCCCCEEEECCCCEEEEEEECCCEEEECCCCCCCCEEECCCEECCE IAGPVTITPQMGFIEIFYGNSPKHSSQLLSLGLVGCRVETQLYKHLGDFKHVVTPYSFFH ECCCEEECCCCCEEEEEECCCCCHHHHHHHHHHEEEEHHHHHHHHHCCHHHHCCCEEEEE YYTSPTSSPNQHYIFDITDGWARLNKLTIGFKNSLLLKEQNGISQLFYANIYTHAFFNSK EECCCCCCCCCEEEEEECCCHHHHEEEEEEECCCEEEECCCCCHHHHHHHHHEEEEECCC TIARTFPKLYGKFVFSSISTIKHTIQTAWDFQHHLFDHFNFRSEWTLSADFALAIEYRHR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEEEEEEECC SAYSWRKVDEGNFFLDSFRSENNLFNSALSDRRNTFLLHFFYRFHPNWACEFSSRQGWNR CCCCCEEECCCCEEEEHHCCCCHHHHHHHHCCCCEEEEEEEEEECCCEEEEECCCCCCCC KKEPSYLEYEIDLLTTIQTAWHLRLSFQHRENDNRIALYVNVGLRRPEGKYCEHKIYTFD CCCCCEEEEEEEEHHHEEEEEEEEEEEEECCCCCEEEEEEEECEECCCCCCCCCEEEEEC >Mature Secondary Structure MCFHPFILFLSLLPFLGFCLSNYAEETVKVVHEGFAEGITVDLKEPLYIDGVMTTNQGGV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEEEEEECCCCE ISAPRLRIQAKVIRYTKKMIDKTPILTIEAEDQLMIEFGDYLFTGQKLYYDFQKKEGFIE EECCCEEHHHHHHHHHHHHHCCCCEEEEECCCEEEEEECCEEEECCEEEEEEHHCCCHHH YGRTAIEPWFFGGEKIEMRCDGSYVLYNGYITTSENEQPEWGLYSNNVYVKQGRHLKAYD HCCHHCCCEEECCCEEEEEECCCEEEEEEEEECCCCCCCCCCEEECCEEEECCCEEEEEE VQLKLKKYTILWIPSLSANLDSIFDSPIRYRFRWGGRQGPRIGLTYEIFSWNRWKTFVRF EEEEEEEEEEEEECCCCCCHHHHCCCCEEEEEEECCCCCCEEEEEEEEECCCCEEEEEEE DYRLARGPGGGIETRYHSVDRKTEFQSINYLARDSSLLDPNEKARYRFEGLFKTLLDQDK EEEEECCCCCCCCCCEECCCCCCHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHCCCC VSILMTYDKISDRDMPSSYHDRDFDFDPSERTQVLIRRQEDSWIGNLYTRLRINSFQTVK EEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHEEEEEEECHHHHHH QELPTLSVNFKPFPLQRTGIIFENWASVSYLDFKYSKHIVDVPNYASNRFEYRPTLYRPF HHCCEEEECCCCCCCCCCCEEEECCCCEEEEEEECCCEEEECCCCCCCCEEECCCEECCE IAGPVTITPQMGFIEIFYGNSPKHSSQLLSLGLVGCRVETQLYKHLGDFKHVVTPYSFFH ECCCEEECCCCCEEEEEECCCCCHHHHHHHHHHEEEEHHHHHHHHHCCHHHHCCCEEEEE YYTSPTSSPNQHYIFDITDGWARLNKLTIGFKNSLLLKEQNGISQLFYANIYTHAFFNSK EECCCCCCCCCEEEEEECCCHHHHEEEEEEECCCEEEECCCCCHHHHHHHHHEEEEECCC TIARTFPKLYGKFVFSSISTIKHTIQTAWDFQHHLFDHFNFRSEWTLSADFALAIEYRHR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEEEEEEECC SAYSWRKVDEGNFFLDSFRSENNLFNSALSDRRNTFLLHFFYRFHPNWACEFSSRQGWNR CCCCCEEECCCCEEEEHHCCCCHHHHHHHHCCCCEEEEEEEEEECCCEEEEECCCCCCCC KKEPSYLEYEIDLLTTIQTAWHLRLSFQHRENDNRIALYVNVGLRRPEGKYCEHKIYTFD CCCCCEEEEEEEEHHHEEEEEEEEEEEEECCCCCEEEEEEEECEECCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA