Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446241

Identifier: 46446241

GI number: 46446241

Start: 747716

End: 749878

Strand: Reverse

Name: 46446241

Synonym: pc0607

Alternate gene names: NA

Gene position: 749878-747716 (Counterclockwise)

Preceding gene: 46446243

Following gene: 46446227

Centisome position: 31.06

GC content: 35.23

Gene sequence:

>2163_bases
ATGTGTTTTCATCCCTTCATTTTATTTTTATCTCTTCTTCCATTTTTAGGGTTTTGCCTCTCCAATTATGCTGAAGAAAC
CGTTAAAGTCGTACATGAGGGTTTTGCTGAAGGCATCACTGTCGACCTAAAAGAACCTCTTTATATAGATGGTGTTATGA
CAACCAATCAAGGAGGGGTGATTTCTGCACCTCGCCTTCGTATCCAAGCAAAAGTCATCCGTTATACAAAAAAAATGATC
GATAAAACTCCGATTTTAACAATTGAAGCAGAAGACCAGCTCATGATCGAATTTGGAGATTACCTATTTACAGGACAAAA
ACTCTACTACGACTTTCAAAAAAAAGAAGGTTTTATTGAATATGGACGAACAGCGATAGAACCTTGGTTTTTCGGAGGCG
AAAAAATTGAAATGCGCTGTGATGGTAGTTATGTTTTATATAATGGTTATATTACGACATCGGAAAACGAACAACCCGAA
TGGGGTCTTTATTCAAATAATGTCTATGTCAAACAAGGACGACACCTGAAAGCTTATGATGTACAACTAAAACTCAAAAA
ATACACTATTTTATGGATTCCTTCTTTAAGCGCTAACTTAGACTCTATTTTTGATTCCCCTATTCGTTATCGTTTTAGAT
GGGGAGGAAGACAGGGGCCACGTATAGGACTTACTTACGAAATATTTTCTTGGAATCGTTGGAAAACATTTGTGCGATTT
GATTATCGTTTAGCTAGAGGCCCAGGAGGAGGTATTGAAACAAGATATCATTCTGTTGATCGTAAAACGGAATTTCAAAG
CATTAATTATTTAGCTAGAGATTCTTCTCTTTTGGACCCAAATGAAAAAGCCCGCTATCGTTTTGAAGGGTTATTTAAAA
CACTCTTAGATCAAGATAAAGTAAGTATCTTAATGACTTATGACAAGATCAGTGATAGAGATATGCCAAGTAGTTACCAC
GATAGAGATTTTGATTTTGATCCGTCAGAAAGAACACAAGTATTAATCAGAAGACAAGAAGATTCATGGATTGGAAATTT
ATACACACGTTTGCGTATTAATAGTTTTCAAACCGTTAAACAAGAGCTTCCTACCCTGTCAGTAAACTTTAAGCCTTTCC
CTTTGCAAAGAACGGGAATTATATTTGAAAATTGGGCTAGTGTTTCTTACTTAGATTTTAAGTACTCCAAACACATAGTG
GATGTTCCTAATTATGCTTCCAATCGGTTTGAATATAGACCTACTTTATATCGACCATTCATTGCAGGCCCCGTAACTAT
TACCCCTCAAATGGGTTTTATAGAGATTTTTTATGGAAATAGCCCGAAACATTCCTCTCAACTCCTTAGTTTGGGATTAG
TCGGTTGTCGAGTTGAAACACAACTTTATAAACATCTGGGCGACTTTAAACATGTTGTTACCCCCTATTCATTTTTTCAC
TACTATACCTCTCCTACTTCATCTCCCAATCAACATTACATTTTTGATATTACAGATGGTTGGGCTCGCTTAAACAAATT
AACGATAGGTTTTAAAAATTCATTGTTATTAAAAGAACAAAACGGCATTTCACAACTTTTTTATGCAAATATTTATACTC
ACGCTTTTTTCAACTCCAAAACGATTGCTCGAACTTTTCCCAAACTTTATGGGAAATTTGTCTTTTCCTCTATTTCTACT
ATTAAACACACGATTCAAACAGCCTGGGATTTTCAACATCATCTATTTGATCATTTTAATTTTCGCTCTGAATGGACATT
AAGCGCTGACTTTGCCTTAGCTATCGAGTATCGTCACAGAAGCGCTTATAGTTGGCGCAAAGTCGATGAAGGAAACTTTT
TTCTTGATAGTTTTCGCTCTGAAAACAATTTATTTAATTCAGCTCTATCTGATAGACGAAATACTTTTTTACTTCATTTC
TTCTATCGTTTTCATCCTAATTGGGCTTGCGAATTTTCTTCTAGACAAGGATGGAATCGAAAGAAAGAACCTAGTTATTT
AGAATATGAAATCGATTTATTAACAACAATTCAGACGGCTTGGCATTTACGTCTTTCTTTTCAACATCGTGAAAATGACA
ATCGTATAGCTCTGTACGTGAATGTAGGTTTAAGAAGGCCTGAAGGAAAGTACTGTGAACACAAAATTTATACGTTCGAT
TAA

Upstream 100 bases:

>100_bases
CATTTCTATCCATTTTACTCTGAAATAGGTCATTCTCACCTTTTGAGTTAATCGCTTTCATCGTATAATCTGCTCTTTTT
ATCTTATCAAACGTATATCC

Downstream 100 bases:

>100_bases
TTCTTAGTTATTTTAATTTTAAACAAATCAATAGTAATTTTAAAACATTTTTCTATATTTCTTAATATATATATATATAT
TAAATAACTGCAATTATTCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 720; Mature: 720

Protein sequence:

>720_residues
MCFHPFILFLSLLPFLGFCLSNYAEETVKVVHEGFAEGITVDLKEPLYIDGVMTTNQGGVISAPRLRIQAKVIRYTKKMI
DKTPILTIEAEDQLMIEFGDYLFTGQKLYYDFQKKEGFIEYGRTAIEPWFFGGEKIEMRCDGSYVLYNGYITTSENEQPE
WGLYSNNVYVKQGRHLKAYDVQLKLKKYTILWIPSLSANLDSIFDSPIRYRFRWGGRQGPRIGLTYEIFSWNRWKTFVRF
DYRLARGPGGGIETRYHSVDRKTEFQSINYLARDSSLLDPNEKARYRFEGLFKTLLDQDKVSILMTYDKISDRDMPSSYH
DRDFDFDPSERTQVLIRRQEDSWIGNLYTRLRINSFQTVKQELPTLSVNFKPFPLQRTGIIFENWASVSYLDFKYSKHIV
DVPNYASNRFEYRPTLYRPFIAGPVTITPQMGFIEIFYGNSPKHSSQLLSLGLVGCRVETQLYKHLGDFKHVVTPYSFFH
YYTSPTSSPNQHYIFDITDGWARLNKLTIGFKNSLLLKEQNGISQLFYANIYTHAFFNSKTIARTFPKLYGKFVFSSIST
IKHTIQTAWDFQHHLFDHFNFRSEWTLSADFALAIEYRHRSAYSWRKVDEGNFFLDSFRSENNLFNSALSDRRNTFLLHF
FYRFHPNWACEFSSRQGWNRKKEPSYLEYEIDLLTTIQTAWHLRLSFQHRENDNRIALYVNVGLRRPEGKYCEHKIYTFD

Sequences:

>Translated_720_residues
MCFHPFILFLSLLPFLGFCLSNYAEETVKVVHEGFAEGITVDLKEPLYIDGVMTTNQGGVISAPRLRIQAKVIRYTKKMI
DKTPILTIEAEDQLMIEFGDYLFTGQKLYYDFQKKEGFIEYGRTAIEPWFFGGEKIEMRCDGSYVLYNGYITTSENEQPE
WGLYSNNVYVKQGRHLKAYDVQLKLKKYTILWIPSLSANLDSIFDSPIRYRFRWGGRQGPRIGLTYEIFSWNRWKTFVRF
DYRLARGPGGGIETRYHSVDRKTEFQSINYLARDSSLLDPNEKARYRFEGLFKTLLDQDKVSILMTYDKISDRDMPSSYH
DRDFDFDPSERTQVLIRRQEDSWIGNLYTRLRINSFQTVKQELPTLSVNFKPFPLQRTGIIFENWASVSYLDFKYSKHIV
DVPNYASNRFEYRPTLYRPFIAGPVTITPQMGFIEIFYGNSPKHSSQLLSLGLVGCRVETQLYKHLGDFKHVVTPYSFFH
YYTSPTSSPNQHYIFDITDGWARLNKLTIGFKNSLLLKEQNGISQLFYANIYTHAFFNSKTIARTFPKLYGKFVFSSIST
IKHTIQTAWDFQHHLFDHFNFRSEWTLSADFALAIEYRHRSAYSWRKVDEGNFFLDSFRSENNLFNSALSDRRNTFLLHF
FYRFHPNWACEFSSRQGWNRKKEPSYLEYEIDLLTTIQTAWHLRLSFQHRENDNRIALYVNVGLRRPEGKYCEHKIYTFD
>Mature_720_residues
MCFHPFILFLSLLPFLGFCLSNYAEETVKVVHEGFAEGITVDLKEPLYIDGVMTTNQGGVISAPRLRIQAKVIRYTKKMI
DKTPILTIEAEDQLMIEFGDYLFTGQKLYYDFQKKEGFIEYGRTAIEPWFFGGEKIEMRCDGSYVLYNGYITTSENEQPE
WGLYSNNVYVKQGRHLKAYDVQLKLKKYTILWIPSLSANLDSIFDSPIRYRFRWGGRQGPRIGLTYEIFSWNRWKTFVRF
DYRLARGPGGGIETRYHSVDRKTEFQSINYLARDSSLLDPNEKARYRFEGLFKTLLDQDKVSILMTYDKISDRDMPSSYH
DRDFDFDPSERTQVLIRRQEDSWIGNLYTRLRINSFQTVKQELPTLSVNFKPFPLQRTGIIFENWASVSYLDFKYSKHIV
DVPNYASNRFEYRPTLYRPFIAGPVTITPQMGFIEIFYGNSPKHSSQLLSLGLVGCRVETQLYKHLGDFKHVVTPYSFFH
YYTSPTSSPNQHYIFDITDGWARLNKLTIGFKNSLLLKEQNGISQLFYANIYTHAFFNSKTIARTFPKLYGKFVFSSIST
IKHTIQTAWDFQHHLFDHFNFRSEWTLSADFALAIEYRHRSAYSWRKVDEGNFFLDSFRSENNLFNSALSDRRNTFLLHF
FYRFHPNWACEFSSRQGWNRKKEPSYLEYEIDLLTTIQTAWHLRLSFQHRENDNRIALYVNVGLRRPEGKYCEHKIYTFD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 85044; Mature: 85044

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCFHPFILFLSLLPFLGFCLSNYAEETVKVVHEGFAEGITVDLKEPLYIDGVMTTNQGGV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEEEEEECCCCE
ISAPRLRIQAKVIRYTKKMIDKTPILTIEAEDQLMIEFGDYLFTGQKLYYDFQKKEGFIE
EECCCEEHHHHHHHHHHHHHCCCCEEEEECCCEEEEEECCEEEECCEEEEEEHHCCCHHH
YGRTAIEPWFFGGEKIEMRCDGSYVLYNGYITTSENEQPEWGLYSNNVYVKQGRHLKAYD
HCCHHCCCEEECCCEEEEEECCCEEEEEEEEECCCCCCCCCCEEECCEEEECCCEEEEEE
VQLKLKKYTILWIPSLSANLDSIFDSPIRYRFRWGGRQGPRIGLTYEIFSWNRWKTFVRF
EEEEEEEEEEEEECCCCCCHHHHCCCCEEEEEEECCCCCCEEEEEEEEECCCCEEEEEEE
DYRLARGPGGGIETRYHSVDRKTEFQSINYLARDSSLLDPNEKARYRFEGLFKTLLDQDK
EEEEECCCCCCCCCCEECCCCCCHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHCCCC
VSILMTYDKISDRDMPSSYHDRDFDFDPSERTQVLIRRQEDSWIGNLYTRLRINSFQTVK
EEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHEEEEEEECHHHHHH
QELPTLSVNFKPFPLQRTGIIFENWASVSYLDFKYSKHIVDVPNYASNRFEYRPTLYRPF
HHCCEEEECCCCCCCCCCCEEEECCCCEEEEEEECCCEEEECCCCCCCCEEECCCEECCE
IAGPVTITPQMGFIEIFYGNSPKHSSQLLSLGLVGCRVETQLYKHLGDFKHVVTPYSFFH
ECCCEEECCCCCEEEEEECCCCCHHHHHHHHHHEEEEHHHHHHHHHCCHHHHCCCEEEEE
YYTSPTSSPNQHYIFDITDGWARLNKLTIGFKNSLLLKEQNGISQLFYANIYTHAFFNSK
EECCCCCCCCCEEEEEECCCHHHHEEEEEEECCCEEEECCCCCHHHHHHHHHEEEEECCC
TIARTFPKLYGKFVFSSISTIKHTIQTAWDFQHHLFDHFNFRSEWTLSADFALAIEYRHR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEEEEEEECC
SAYSWRKVDEGNFFLDSFRSENNLFNSALSDRRNTFLLHFFYRFHPNWACEFSSRQGWNR
CCCCCEEECCCCEEEEHHCCCCHHHHHHHHCCCCEEEEEEEEEECCCEEEEECCCCCCCC
KKEPSYLEYEIDLLTTIQTAWHLRLSFQHRENDNRIALYVNVGLRRPEGKYCEHKIYTFD
CCCCCEEEEEEEEHHHEEEEEEEEEEEEECCCCCEEEEEEEECEECCCCCCCCCEEEEEC
>Mature Secondary Structure
MCFHPFILFLSLLPFLGFCLSNYAEETVKVVHEGFAEGITVDLKEPLYIDGVMTTNQGGV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEEEEEECCCCE
ISAPRLRIQAKVIRYTKKMIDKTPILTIEAEDQLMIEFGDYLFTGQKLYYDFQKKEGFIE
EECCCEEHHHHHHHHHHHHHCCCCEEEEECCCEEEEEECCEEEECCEEEEEEHHCCCHHH
YGRTAIEPWFFGGEKIEMRCDGSYVLYNGYITTSENEQPEWGLYSNNVYVKQGRHLKAYD
HCCHHCCCEEECCCEEEEEECCCEEEEEEEEECCCCCCCCCCEEECCEEEECCCEEEEEE
VQLKLKKYTILWIPSLSANLDSIFDSPIRYRFRWGGRQGPRIGLTYEIFSWNRWKTFVRF
EEEEEEEEEEEEECCCCCCHHHHCCCCEEEEEEECCCCCCEEEEEEEEECCCCEEEEEEE
DYRLARGPGGGIETRYHSVDRKTEFQSINYLARDSSLLDPNEKARYRFEGLFKTLLDQDK
EEEEECCCCCCCCCCEECCCCCCHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHCCCC
VSILMTYDKISDRDMPSSYHDRDFDFDPSERTQVLIRRQEDSWIGNLYTRLRINSFQTVK
EEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHEEEEEEECHHHHHH
QELPTLSVNFKPFPLQRTGIIFENWASVSYLDFKYSKHIVDVPNYASNRFEYRPTLYRPF
HHCCEEEECCCCCCCCCCCEEEECCCCEEEEEEECCCEEEECCCCCCCCEEECCCEECCE
IAGPVTITPQMGFIEIFYGNSPKHSSQLLSLGLVGCRVETQLYKHLGDFKHVVTPYSFFH
ECCCEEECCCCCEEEEEECCCCCHHHHHHHHHHEEEEHHHHHHHHHCCHHHHCCCEEEEE
YYTSPTSSPNQHYIFDITDGWARLNKLTIGFKNSLLLKEQNGISQLFYANIYTHAFFNSK
EECCCCCCCCCEEEEEECCCHHHHEEEEEEECCCEEEECCCCCHHHHHHHHHEEEEECCC
TIARTFPKLYGKFVFSSISTIKHTIQTAWDFQHHLFDHFNFRSEWTLSADFALAIEYRHR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEEEEEEECC
SAYSWRKVDEGNFFLDSFRSENNLFNSALSDRRNTFLLHFFYRFHPNWACEFSSRQGWNR
CCCCCEEECCCCEEEEHHCCCCHHHHHHHHCCCCEEEEEEEEEECCCEEEEECCCCCCCC
KKEPSYLEYEIDLLTTIQTAWHLRLSFQHRENDNRIALYVNVGLRRPEGKYCEHKIYTFD
CCCCCEEEEEEEEHHHEEEEEEEEEEEEECCCCCEEEEEEEECEECCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA