| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446164
Identifier: 46446164
GI number: 46446164
Start: 662487
End: 663242
Strand: Reverse
Name: 46446164
Synonym: pc0530
Alternate gene names: NA
Gene position: 663242-662487 (Counterclockwise)
Preceding gene: 46446166
Following gene: 46446160
Centisome position: 27.47
GC content: 33.47
Gene sequence:
>756_bases ATGAACAATTTTTTATATTATGGAACATGCCCTGACCAATACCAAATGCATTATACTAATTTCCAAGTACCTTTTAGAAA AGGAAAAGAAATTTCAACTCAATTGCCAAAAAATATTGCAGTGATTCGAGCGGTGGCAGTCGTAGTTTTTGCATCTTTAG CAGCTTTAAAACTCAACGCTACAATTTTCTGTTGGCCTGTCATGATAGCAGGATTAGCCTTTGCTGGATGGACAATCTAT ACCCACCTTTTGTCTAAAGATCCTTTAATGGAGGCTTTTTATAAAATTTTAGGAGGAAAAGATAGATTTGAAGCATTGCC AAAAATTAACCTTGCACAAGCCCCGAATGAAAAAATTTGTGAGGCTATTAAAAAGATTGATTGGGATAATTTAAATCATT CAGTCGCTAAAACAAGGACTTTAGATGGTCGAAATGTTGTCATTATCAAAGGTCTTAACCGTAATAATGGTGTCCTTTTT CCTAACTGTCAAACTAAAAGTGTCTTAGCCTTTGTAGAGAAAATTAATCCACAAGATATTCCTAGAGCTATATCAAATTT ACCAGAAATTGCTGATACAATTATGCACGCCATTTTCACTCCTCATAAAGGAAATACATTTAGCAGCTTTCTTTATTCTA GTATCTCTGATAGAGGTAATGGGCACGATAATTATAATTGTAATATGTATTCTTCTATTTCAACCAATATAGCTAATGAG CTATATACGCAGTTGAATACAGTTGAGATACAATAG
Upstream 100 bases:
>100_bases CTTAAACAGCTATATTAATGTTGTTTTAAAAAAACTTTATAATACCTTAATAATCAACAAATAAAATCGGTTCTGGTTGT AATTATATTTAAGGAAATTT
Downstream 100 bases:
>100_bases TATTTAACTACAATTAAGAGATTTCATCAGCCTTGTTATTATTATAGCAAGGCTTATTTCTCTCTTATGCCCACGCGCTC AATTGGATTTAAAAATTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MNNFLYYGTCPDQYQMHYTNFQVPFRKGKEISTQLPKNIAVIRAVAVVVFASLAALKLNATIFCWPVMIAGLAFAGWTIY THLLSKDPLMEAFYKILGGKDRFEALPKINLAQAPNEKICEAIKKIDWDNLNHSVAKTRTLDGRNVVIIKGLNRNNGVLF PNCQTKSVLAFVEKINPQDIPRAISNLPEIADTIMHAIFTPHKGNTFSSFLYSSISDRGNGHDNYNCNMYSSISTNIANE LYTQLNTVEIQ
Sequences:
>Translated_251_residues MNNFLYYGTCPDQYQMHYTNFQVPFRKGKEISTQLPKNIAVIRAVAVVVFASLAALKLNATIFCWPVMIAGLAFAGWTIY THLLSKDPLMEAFYKILGGKDRFEALPKINLAQAPNEKICEAIKKIDWDNLNHSVAKTRTLDGRNVVIIKGLNRNNGVLF PNCQTKSVLAFVEKINPQDIPRAISNLPEIADTIMHAIFTPHKGNTFSSFLYSSISDRGNGHDNYNCNMYSSISTNIANE LYTQLNTVEIQ >Mature_251_residues MNNFLYYGTCPDQYQMHYTNFQVPFRKGKEISTQLPKNIAVIRAVAVVVFASLAALKLNATIFCWPVMIAGLAFAGWTIY THLLSKDPLMEAFYKILGGKDRFEALPKINLAQAPNEKICEAIKKIDWDNLNHSVAKTRTLDGRNVVIIKGLNRNNGVLF PNCQTKSVLAFVEKINPQDIPRAISNLPEIADTIMHAIFTPHKGNTFSSFLYSSISDRGNGHDNYNCNMYSSISTNIANE LYTQLNTVEIQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28198; Mature: 28198
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNFLYYGTCPDQYQMHYTNFQVPFRKGKEISTQLPKNIAVIRAVAVVVFASLAALKLNA CCCEEEECCCCCCCEEEEECEECCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC TIFCWPVMIAGLAFAGWTIYTHLLSKDPLMEAFYKILGGKDRFEALPKINLAQAPNEKIC EEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHH EAIKKIDWDNLNHSVAKTRTLDGRNVVIIKGLNRNNGVLFPNCQTKSVLAFVEKINPQDI HHHHHCCCCCCCCHHHHHEECCCCCEEEEEECCCCCCEEECCCCHHHHHHHHHHCCHHHH PRAISNLPEIADTIMHAIFTPHKGNTFSSFLYSSISDRGNGHDNYNCNMYSSISTNIANE HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHH LYTQLNTVEIQ HHHHHHCEEEC >Mature Secondary Structure MNNFLYYGTCPDQYQMHYTNFQVPFRKGKEISTQLPKNIAVIRAVAVVVFASLAALKLNA CCCEEEECCCCCCCEEEEECEECCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC TIFCWPVMIAGLAFAGWTIYTHLLSKDPLMEAFYKILGGKDRFEALPKINLAQAPNEKIC EEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHH EAIKKIDWDNLNHSVAKTRTLDGRNVVIIKGLNRNNGVLFPNCQTKSVLAFVEKINPQDI HHHHHCCCCCCCCHHHHHEECCCCCEEEEEECCCCCCEEECCCCHHHHHHHHHHCCHHHH PRAISNLPEIADTIMHAIFTPHKGNTFSSFLYSSISDRGNGHDNYNCNMYSSISTNIANE HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHH LYTQLNTVEIQ HHHHHHCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA