| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446146
Identifier: 46446146
GI number: 46446146
Start: 646109
End: 646447
Strand: Reverse
Name: 46446146
Synonym: pc0512
Alternate gene names: NA
Gene position: 646447-646109 (Counterclockwise)
Preceding gene: 46446159
Following gene: 46446145
Centisome position: 26.77
GC content: 35.4
Gene sequence:
>339_bases ATGAATTTTTTCAAATGCGAGAAGACATTTTTCTCAGCGAATTTTAAGAATTGTCTGCTGCAGTACTGCAATTTTTTAGA TCTCAACATGAAGAGTAGTTCTTTCAATGGAAGCAAATTAAAAGACAGCCATTTTACAAACACAACATTGAAAAGTGCTG ATTTCAGCGGCGTTGACTTGTCAGGAGCAATTTTCCACAATTGCGATCTGTGCAATGCAGATTTTTCTAGTAGTACCCAA TGTGATATCGATCCGAAATCAAATAAAATCGAGAAAGCAAAATTTTCTTTTGCAGAAGCTTCTGGGTTGCTCCACGCTTT TGATATAACAATTGTTTAG
Upstream 100 bases:
>100_bases ATTCAATCGTGCACTTTCTCGAATTGCAATTTCAGTCTTGTAAAGCTGGACGGTTGCCATCTTCAGAATGTTCAATTCTC AGACTTCAAGATTACTGGAG
Downstream 100 bases:
>100_bases AATGACTTAAGTTTCAATCATAGGCAGAACTGATTGAGCTGGAGCTAAAAGTGGTCGGCATCAAGGCCGTCTTCCTCCTG CCAGCAGGCTGCTAAAATAA
Product: putative antibiotic resistance protein
Products: NA
Alternate protein names: Pentapeptide Repeat-Containing Protein; MCBG-Like Protein; MCBG Protein; Antibiotic Resistance Protein; MCBG Protein-Like
Number of amino acids: Translated: 112; Mature: 112
Protein sequence:
>112_residues MNFFKCEKTFFSANFKNCLLQYCNFLDLNMKSSSFNGSKLKDSHFTNTTLKSADFSGVDLSGAIFHNCDLCNADFSSSTQ CDIDPKSNKIEKAKFSFAEASGLLHAFDITIV
Sequences:
>Translated_112_residues MNFFKCEKTFFSANFKNCLLQYCNFLDLNMKSSSFNGSKLKDSHFTNTTLKSADFSGVDLSGAIFHNCDLCNADFSSSTQ CDIDPKSNKIEKAKFSFAEASGLLHAFDITIV >Mature_112_residues MNFFKCEKTFFSANFKNCLLQYCNFLDLNMKSSSFNGSKLKDSHFTNTTLKSADFSGVDLSGAIFHNCDLCNADFSSSTQ CDIDPKSNKIEKAKFSFAEASGLLHAFDITIV
Specific function: Unknown
COG id: COG1357
COG function: function code S; Uncharacterized low-complexity proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12467; Mature: 12467
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 5.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFFKCEKTFFSANFKNCLLQYCNFLDLNMKSSSFNGSKLKDSHFTNTTLKSADFSGVDL CCCCCCCHHHHCCCHHHHHHHHCCEECCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCC SGAIFHNCDLCNADFSSSTQCDIDPKSNKIEKAKFSFAEASGLLHAFDITIV CCEEEECCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHCCCEEEEEEEEC >Mature Secondary Structure MNFFKCEKTFFSANFKNCLLQYCNFLDLNMKSSSFNGSKLKDSHFTNTTLKSADFSGVDL CCCCCCCHHHHCCCHHHHHHHHCCEECCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCC SGAIFHNCDLCNADFSSSTQCDIDPKSNKIEKAKFSFAEASGLLHAFDITIV CCEEEECCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA