Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446115

Identifier: 46446115

GI number: 46446115

Start: 619084

End: 619767

Strand: Reverse

Name: 46446115

Synonym: pc0481

Alternate gene names: NA

Gene position: 619767-619084 (Counterclockwise)

Preceding gene: 46446116

Following gene: 46446114

Centisome position: 25.67

GC content: 38.74

Gene sequence:

>684_bases
TTGCCTTTCATTTGGAGCGAACCTGTTCGTCCTCCTGGCATGTCTTTTACAAAACGGACGAAAGAAGAAAAACTTCCCCC
ATTTCATGATCATCATGACCCTGATAAACGAGCCATTTGTTTACATCGCTTTGCGGGTCATGAACTATTAGCTGTGGAAA
TCATGGCTTTTACGCTCCTTGCTTTTCCTGATGCCCCAAAAAATTTTCGTAAAGGGTTAATGAATACACTTCGAGAAGAA
CAGGGTCATGTTCAGCTTTATATGACACGAATGAGTCAGATGGGAATTCAATTTGGAGATCTTCCTCTTTATAAACATTT
TTGGAATCATATTCCTTACATTCATTCTCCTCTTCACTATATTAGTCTCATGAGCTTAACATTTGAAATGGCGAATTTGG
ATTTTGCTCCTATGTATGGCAAATCATTTGCTCATTTTGGAGATGACCTATCCGCTCAATTAATGGCTACCATTTTAAAA
GATGAAATCTCACATGTTGGATTTGGCTGGCATTGGTTACGTCGACTCAAAAACAAAGACGATAATGAGTGGGATGCGTG
GGAAAAAACTCTTGCAACAACATTATTGAATCCAAAACGAGCGAAAGGTTTTGTTTTACATTCTGAAAATCGGCAAAAAG
CCGGCATTCCCCAAGATTGGATTCAAAAATTTCAAGCCATGTAG

Upstream 100 bases:

>100_bases
AAACATGGAATTGCGTGAATGGGCTCATTCAATTTTAGCCTCAGACACCTTAGAAGGCAAACTGGCTCATCCTTCCGTTC
TAACGGATTGTGAACCAGGC

Downstream 100 bases:

>100_bases
GCCAAACATTATCAACAATTAATTAAAAAAATAAGCTTAATAATAATTCTTTGATCAGATAAGATTTATTTTATTTTTTA
AGGAAATATGCCTTTATCCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MPFIWSEPVRPPGMSFTKRTKEEKLPPFHDHHDPDKRAICLHRFAGHELLAVEIMAFTLLAFPDAPKNFRKGLMNTLREE
QGHVQLYMTRMSQMGIQFGDLPLYKHFWNHIPYIHSPLHYISLMSLTFEMANLDFAPMYGKSFAHFGDDLSAQLMATILK
DEISHVGFGWHWLRRLKNKDDNEWDAWEKTLATTLLNPKRAKGFVLHSENRQKAGIPQDWIQKFQAM

Sequences:

>Translated_227_residues
MPFIWSEPVRPPGMSFTKRTKEEKLPPFHDHHDPDKRAICLHRFAGHELLAVEIMAFTLLAFPDAPKNFRKGLMNTLREE
QGHVQLYMTRMSQMGIQFGDLPLYKHFWNHIPYIHSPLHYISLMSLTFEMANLDFAPMYGKSFAHFGDDLSAQLMATILK
DEISHVGFGWHWLRRLKNKDDNEWDAWEKTLATTLLNPKRAKGFVLHSENRQKAGIPQDWIQKFQAM
>Mature_226_residues
PFIWSEPVRPPGMSFTKRTKEEKLPPFHDHHDPDKRAICLHRFAGHELLAVEIMAFTLLAFPDAPKNFRKGLMNTLREEQ
GHVQLYMTRMSQMGIQFGDLPLYKHFWNHIPYIHSPLHYISLMSLTFEMANLDFAPMYGKSFAHFGDDLSAQLMATILKD
EISHVGFGWHWLRRLKNKDDNEWDAWEKTLATTLLNPKRAKGFVLHSENRQKAGIPQDWIQKFQAM

Specific function: Unknown

COG id: COG2833

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26587; Mature: 26456

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFIWSEPVRPPGMSFTKRTKEEKLPPFHDHHDPDKRAICLHRFAGHELLAVEIMAFTLL
CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHH
AFPDAPKNFRKGLMNTLREEQGHVQLYMTRMSQMGIQFGDLPLYKHFWNHIPYIHSPLHY
HCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHH
ISLMSLTFEMANLDFAPMYGKSFAHFGDDLSAQLMATILKDEISHVGFGWHWLRRLKNKD
HHHHHHHHHHHCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
DNEWDAWEKTLATTLLNPKRAKGFVLHSENRQKAGIPQDWIQKFQAM
CCHHHHHHHHHHHHHCCCHHHCEEEEECCCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure 
PFIWSEPVRPPGMSFTKRTKEEKLPPFHDHHDPDKRAICLHRFAGHELLAVEIMAFTLL
CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHH
AFPDAPKNFRKGLMNTLREEQGHVQLYMTRMSQMGIQFGDLPLYKHFWNHIPYIHSPLHY
HCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHH
ISLMSLTFEMANLDFAPMYGKSFAHFGDDLSAQLMATILKDEISHVGFGWHWLRRLKNKD
HHHHHHHHHHHCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
DNEWDAWEKTLATTLLNPKRAKGFVLHSENRQKAGIPQDWIQKFQAM
CCHHHHHHHHHHHHHCCCHHHCEEEEECCCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA