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The map label for this gene is ybaB [C]

Identifier: 46446111

GI number: 46446111

Start: 612933

End: 613229

Strand: Reverse

Name: ybaB [C]

Synonym: pc0477

Alternate gene names: 46446111

Gene position: 613229-612933 (Counterclockwise)

Preceding gene: 46446112

Following gene: 46446106

Centisome position: 25.4

GC content: 39.39

Gene sequence:

>297_bases
ATGGGAACTGGTTTTTCTAAAAAAAAGAAAGAAGCTCGACTAATACAACAGCAAATGAGTTTGGTTCAAAATGAATTACA
AAATCTTGAAGTGGTAGGTGTCGCAGGAAGTGGTTTAGTGACAATCACCTTGACTGGCGATGGAGAGATGAAACAAGTTA
AAATCAAACCTGAATGTGTCGACGTAGAAGATTTAGAAGGATTAGAGATGTTAATTCGTGCAGCTCATGCCGATGCTCAT
AAACGATTAAAAGAACAAAGCCCTCCCATTCCCGGATTCCCAGGATTCTTGGCTTAA

Upstream 100 bases:

>100_bases
GCTTCCCTCACAGCAAAAAACTTTCATTCGAATGTTGAATTAGTAAGATAAATTATCAAAAAAAAGAAAATCTAAACGAC
ATGTATTTAAAGGAGAAAGA

Downstream 100 bases:

>100_bases
AATTTTTACCTGCAAATATGCTTTAACTTCTAGCCTAATTCCATGCTAGAGGAGAAAACATTTTACAGGTAATGTTTTCT
TAATTTCAAAACAAAATTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 97

Protein sequence:

>98_residues
MGTGFSKKKKEARLIQQQMSLVQNELQNLEVVGVAGSGLVTITLTGDGEMKQVKIKPECVDVEDLEGLEMLIRAAHADAH
KRLKEQSPPIPGFPGFLA

Sequences:

>Translated_98_residues
MGTGFSKKKKEARLIQQQMSLVQNELQNLEVVGVAGSGLVTITLTGDGEMKQVKIKPECVDVEDLEGLEMLIRAAHADAH
KRLKEQSPPIPGFPGFLA
>Mature_97_residues
GTGFSKKKKEARLIQQQMSLVQNELQNLEVVGVAGSGLVTITLTGDGEMKQVKIKPECVDVEDLEGLEMLIRAAHADAHK
RLKEQSPPIPGFPGFLA

Specific function: Unknown

COG id: COG0718

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0133 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y477_PARUW (Q6MDZ8)

Other databases:

- EMBL:   BX908798
- RefSeq:   YP_007476.1
- HSSP:   P0A8B5
- ProteinModelPortal:   Q6MDZ8
- SMR:   Q6MDZ8
- STRING:   Q6MDZ8
- GeneID:   2780493
- GenomeReviews:   BX908798_GR
- KEGG:   pcu:pc0477
- NMPDR:   fig|264201.1.peg.477
- eggNOG:   COG0718
- HOGENOM:   HBG734215
- OMA:   FRSAFKE
- ProtClustDB:   CLSK2762186
- BioCyc:   CPRO264201:PC0477-MONOMER
- HAMAP:   MF_00274
- InterPro:   IPR004401
- Gene3D:   G3DSA:3.30.1310.10
- PIRSF:   PIRSF004555
- TIGRFAMs:   TIGR00103

Pfam domain/function: PF02575 DUF149; SSF82607 CHP00103

EC number: NA

Molecular weight: Translated: 10642; Mature: 10510

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTGFSKKKKEARLIQQQMSLVQNELQNLEVVGVAGSGLVTITLTGDGEMKQVKIKPECV
CCCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCEEEEEEECCCCEEEEEECCCCC
DVEDLEGLEMLIRAAHADAHKRLKEQSPPIPGFPGFLA
CHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
GTGFSKKKKEARLIQQQMSLVQNELQNLEVVGVAGSGLVTITLTGDGEMKQVKIKPECV
CCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCEEEEEEECCCCEEEEEECCCCC
DVEDLEGLEMLIRAAHADAHKRLKEQSPPIPGFPGFLA
CHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA