Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446090

Identifier: 46446090

GI number: 46446090

Start: 585047

End: 586531

Strand: Reverse

Name: 46446090

Synonym: pc0456

Alternate gene names: NA

Gene position: 586531-585047 (Counterclockwise)

Preceding gene: 46446091

Following gene: 46446089

Centisome position: 24.29

GC content: 35.69

Gene sequence:

>1485_bases
ATGGCTAATGTTCAATTATCAAATATCATTATTGGCATCAATCGTGGAAATGTTTTGGCTTGCGATTCTGTTGGAAACTT
TCAAGTTTTTGGTCATGGAGTCGTACCTCCAGCCGATTATCAAAATGATTGTGAAATTGTCAAAGCAAAAGTAATCCAAT
TTATCAATAATAATAAAGATGCTTTTAATCCAAATCTAGTCGACGCATTTGAGCAACAGCTTAAAAAAATGCGAGCAACA
CTTTCTCGTCCCTTCGTTTTTCCGCGATTTCTGGAGTTTTTTCTCCGTTTCATCAAAAAGCCTCCTCTTAATAGACAATT
TGATGATAAGCAATTTCTAGAGACTTTACTTAACTCTATCAATTTGACACGAAATTCTCAACCTCATCCCCTTTCACAAT
CTTTAGCTGAAGCAGCAAATAGTTGCTCTACGAATTATTCTCCCTCAAACGCTTTCTCTGTTTCTGAAGCTGAGCACAAT
GCTTTTGATACAAATCCAGCCATTATTTCCTCTGATCCTTCTACTGTTGCTTTAACCGAGCATGTTACAACAGAACATGA
AATTCCGCCAAATGGGCAAATTAACCAAATCGTTTCAATAAATCCCCCTCCTCCGCCTCTTCCCCCTCCTCCGCCCCCTA
CACAAAGAAAACCGCTAGGTGCGACAACGACCTCATTTTTGGAAAATCCTCAAGTAAAATCTGAAGCAGACTATTACACA
CTCGAATCTAAGAGATTAAAAAGAAATCTGAAGGAAAGAGCCAACCCCAGCGGTTTTTATTCTTATAAAATTAACCCTGA
AGAAGCAAAACTAGCGACAGCCATTAATGAGAAAATAAAAACAATCCTTGATAGATTAGAAAAATTAGAACCTACTACTC
TTCAAGATGCAAACATCCAAGAGCTGATTCAATCTATGAAAAACGATTTACAAAAAAATGAGATCACCATCAAAGGGACA
TCAACTGCTATTCCAGGCATTCATGTAAATGGAAATAACGGAGTTAAGACATTTCTTCCAGAATTTATTTCTGCCGCAAG
TAAACTCACAAATCAAGAAATTCAATTTGTTATTGGACAATATTTTAATGGAATAGCCCCTACTCAAACTCATCCTGACT
ATGCGACCTATAAATTATTTCAATGTGATTTAGACATTATTTTTAGTCAATGGGATACTTTGTCTACAGGAGAAATAGCT
CAGGAGTTTAGCCTTTTTAAAGATACGTGGAATGATTATTTAAAAAAACAGCTTAAAAGCTTATTAGGTTTACTGATCAA
TCGACAAAATCCGAACCTGTATCAAGTTTCTAATAATCAAAAAGAACCTATTTACCAAAGAGTCTCTTATGAAGATTATT
TAACTAAGCCTAAGCAAAAAGTTGTGCAGCAGGACCTTAATGAGCAGCCAACTGACATGTTTTCTGAACTTACTAATAGT
AAAAAGTTCCAATCTCAATCTAAAAAAACTAGTAGTCGGGTGTGA

Upstream 100 bases:

>100_bases
TTATAATTGTTTCAATCTGTTATTGTCTTTTTGTTAGCTTATATTTTCGAAATAGTTTATAAGAAACAAAGGTTTTTTAA
CTTAAACTAGAAGATTGCAT

Downstream 100 bases:

>100_bases
TAGTTAATCCATACTACTTCTTCATAAATTCCAAAAAGTTCTAAATTCAAAATTTAGACCTTTATTTTTTAGAAATCTAC
CGTATTCATAATGATATCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 494; Mature: 493

Protein sequence:

>494_residues
MANVQLSNIIIGINRGNVLACDSVGNFQVFGHGVVPPADYQNDCEIVKAKVIQFINNNKDAFNPNLVDAFEQQLKKMRAT
LSRPFVFPRFLEFFLRFIKKPPLNRQFDDKQFLETLLNSINLTRNSQPHPLSQSLAEAANSCSTNYSPSNAFSVSEAEHN
AFDTNPAIISSDPSTVALTEHVTTEHEIPPNGQINQIVSINPPPPPLPPPPPPTQRKPLGATTTSFLENPQVKSEADYYT
LESKRLKRNLKERANPSGFYSYKINPEEAKLATAINEKIKTILDRLEKLEPTTLQDANIQELIQSMKNDLQKNEITIKGT
STAIPGIHVNGNNGVKTFLPEFISAASKLTNQEIQFVIGQYFNGIAPTQTHPDYATYKLFQCDLDIIFSQWDTLSTGEIA
QEFSLFKDTWNDYLKKQLKSLLGLLINRQNPNLYQVSNNQKEPIYQRVSYEDYLTKPKQKVVQQDLNEQPTDMFSELTNS
KKFQSQSKKTSSRV

Sequences:

>Translated_494_residues
MANVQLSNIIIGINRGNVLACDSVGNFQVFGHGVVPPADYQNDCEIVKAKVIQFINNNKDAFNPNLVDAFEQQLKKMRAT
LSRPFVFPRFLEFFLRFIKKPPLNRQFDDKQFLETLLNSINLTRNSQPHPLSQSLAEAANSCSTNYSPSNAFSVSEAEHN
AFDTNPAIISSDPSTVALTEHVTTEHEIPPNGQINQIVSINPPPPPLPPPPPPTQRKPLGATTTSFLENPQVKSEADYYT
LESKRLKRNLKERANPSGFYSYKINPEEAKLATAINEKIKTILDRLEKLEPTTLQDANIQELIQSMKNDLQKNEITIKGT
STAIPGIHVNGNNGVKTFLPEFISAASKLTNQEIQFVIGQYFNGIAPTQTHPDYATYKLFQCDLDIIFSQWDTLSTGEIA
QEFSLFKDTWNDYLKKQLKSLLGLLINRQNPNLYQVSNNQKEPIYQRVSYEDYLTKPKQKVVQQDLNEQPTDMFSELTNS
KKFQSQSKKTSSRV
>Mature_493_residues
ANVQLSNIIIGINRGNVLACDSVGNFQVFGHGVVPPADYQNDCEIVKAKVIQFINNNKDAFNPNLVDAFEQQLKKMRATL
SRPFVFPRFLEFFLRFIKKPPLNRQFDDKQFLETLLNSINLTRNSQPHPLSQSLAEAANSCSTNYSPSNAFSVSEAEHNA
FDTNPAIISSDPSTVALTEHVTTEHEIPPNGQINQIVSINPPPPPLPPPPPPTQRKPLGATTTSFLENPQVKSEADYYTL
ESKRLKRNLKERANPSGFYSYKINPEEAKLATAINEKIKTILDRLEKLEPTTLQDANIQELIQSMKNDLQKNEITIKGTS
TAIPGIHVNGNNGVKTFLPEFISAASKLTNQEIQFVIGQYFNGIAPTQTHPDYATYKLFQCDLDIIFSQWDTLSTGEIAQ
EFSLFKDTWNDYLKKQLKSLLGLLINRQNPNLYQVSNNQKEPIYQRVSYEDYLTKPKQKVVQQDLNEQPTDMFSELTNSK
KFQSQSKKTSSRV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55759; Mature: 55627

Theoretical pI: Translated: 7.57; Mature: 7.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANVQLSNIIIGINRGNVLACDSVGNFQVFGHGVVPPADYQNDCEIVKAKVIQFINNNKD
CCCEEEEEEEEEECCCCEEEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCC
AFNPNLVDAFEQQLKKMRATLSRPFVFPRFLEFFLRFIKKPPLNRQFDDKQFLETLLNSI
CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
NLTRNSQPHPLSQSLAEAANSCSTNYSPSNAFSVSEAEHNAFDTNPAIISSDPSTVALTE
CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCEEECCCCEEEEEE
HVTTEHEIPPNGQINQIVSINPPPPPLPPPPPPTQRKPLGATTTSFLENPQVKSEADYYT
CCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEE
LESKRLKRNLKERANPSGFYSYKINPEEAKLATAINEKIKTILDRLEKLEPTTLQDANIQ
HHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
ELIQSMKNDLQKNEITIKGTSTAIPGIHVNGNNGVKTFLPEFISAASKLTNQEIQFVIGQ
HHHHHHHHHHHHCCEEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
YFNGIAPTQTHPDYATYKLFQCDLDIIFSQWDTLSTGEIAQEFSLFKDTWNDYLKKQLKS
HHCCCCCCCCCCCCCEEEEEECCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LLGLLINRQNPNLYQVSNNQKEPIYQRVSYEDYLTKPKQKVVQQDLNEQPTDMFSELTNS
HHHHHHCCCCCCEEEECCCCCCHHHHHCCHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHH
KKFQSQSKKTSSRV
HHHHHHHHHHHCCC
>Mature Secondary Structure 
ANVQLSNIIIGINRGNVLACDSVGNFQVFGHGVVPPADYQNDCEIVKAKVIQFINNNKD
CCEEEEEEEEEECCCCEEEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCC
AFNPNLVDAFEQQLKKMRATLSRPFVFPRFLEFFLRFIKKPPLNRQFDDKQFLETLLNSI
CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
NLTRNSQPHPLSQSLAEAANSCSTNYSPSNAFSVSEAEHNAFDTNPAIISSDPSTVALTE
CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCEEECCCCEEEEEE
HVTTEHEIPPNGQINQIVSINPPPPPLPPPPPPTQRKPLGATTTSFLENPQVKSEADYYT
CCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEE
LESKRLKRNLKERANPSGFYSYKINPEEAKLATAINEKIKTILDRLEKLEPTTLQDANIQ
HHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
ELIQSMKNDLQKNEITIKGTSTAIPGIHVNGNNGVKTFLPEFISAASKLTNQEIQFVIGQ
HHHHHHHHHHHHCCEEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
YFNGIAPTQTHPDYATYKLFQCDLDIIFSQWDTLSTGEIAQEFSLFKDTWNDYLKKQLKS
HHCCCCCCCCCCCCCEEEEEECCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LLGLLINRQNPNLYQVSNNQKEPIYQRVSYEDYLTKPKQKVVQQDLNEQPTDMFSELTNS
HHHHHHCCCCCCEEEECCCCCCHHHHHCCHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHH
KKFQSQSKKTSSRV
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA