| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446079
Identifier: 46446079
GI number: 46446079
Start: 574560
End: 575000
Strand: Reverse
Name: 46446079
Synonym: pc0445
Alternate gene names: NA
Gene position: 575000-574560 (Counterclockwise)
Preceding gene: 46446081
Following gene: 46446078
Centisome position: 23.81
GC content: 34.24
Gene sequence:
>441_bases ATGTTAACCAAAAAAGACTCACTTAAAAATCCTGCTAAAACTAAAATAACGCAATCCCCGCAACCCAACGAAACAGATGT TTTTGCTTTAGCTAAAGCTCCGACTCAACATCCCGCTAAAATTTATGCAAATCGAAAGGATGAATGTGAACATGGATGCT CTCATGTTGAAAAAAAACCCTTATTTAAAACTTCAGTCTTAGTTAAATATGATGTAGGATTTAACAATCAACTGTACATT CGAGGTAATGGAGCGAACCTAACCTGGAACAAAGGGCAACCATTAAAAAACATTAAAGCAGATGAATGGATTTGGGAAAA TGAAACCCCTTTTTCGAGCTGTGAGTTTAAAGTATTAATTAACGATAATCATTATGAAGCGGGTGAAAATCACACTATAA CTAATGGCTGTTCATTTATTTATACTCCTTCATTTGCATAA
Upstream 100 bases:
>100_bases ATTCTTTTATTAACGTAAACATCATTTTTTAGACGCTTAATTTGTGTCTTAAAAGATGCTTAAGAACTATTTTTTACTTA AGTCAACCGAGAGGTGAACC
Downstream 100 bases:
>100_bases AATTATATTTTGAGTCATTAGCCAAATTTTACTTGAAAGCCCTTAAAACAAAATCTATCAATATTTATTTTTAATAATTG ATTATGAGCATTTTTTGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MLTKKDSLKNPAKTKITQSPQPNETDVFALAKAPTQHPAKIYANRKDECEHGCSHVEKKPLFKTSVLVKYDVGFNNQLYI RGNGANLTWNKGQPLKNIKADEWIWENETPFSSCEFKVLINDNHYEAGENHTITNGCSFIYTPSFA
Sequences:
>Translated_146_residues MLTKKDSLKNPAKTKITQSPQPNETDVFALAKAPTQHPAKIYANRKDECEHGCSHVEKKPLFKTSVLVKYDVGFNNQLYI RGNGANLTWNKGQPLKNIKADEWIWENETPFSSCEFKVLINDNHYEAGENHTITNGCSFIYTPSFA >Mature_146_residues MLTKKDSLKNPAKTKITQSPQPNETDVFALAKAPTQHPAKIYANRKDECEHGCSHVEKKPLFKTSVLVKYDVGFNNQLYI RGNGANLTWNKGQPLKNIKADEWIWENETPFSSCEFKVLINDNHYEAGENHTITNGCSFIYTPSFA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16547; Mature: 16547
Theoretical pI: Translated: 8.32; Mature: 8.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTKKDSLKNPAKTKITQSPQPNETDVFALAKAPTQHPAKIYANRKDECEHGCSHVEKKP CCCCCCCCCCCCCCCEECCCCCCCCEEEEEECCCCCCCCEEECCCCHHHHHHHHHHCCCC LFKTSVLVKYDVGFNNQLYIRGNGANLTWNKGQPLKNIKADEWIWENETPFSSCEFKVLI CEEEEEEEEEECCCCCEEEEEECCCEEEECCCCCCCCCCCCCEEECCCCCCCCCEEEEEE NDNHYEAGENHTITNGCSFIYTPSFA CCCCCCCCCCCEECCCCEEEEECCCC >Mature Secondary Structure MLTKKDSLKNPAKTKITQSPQPNETDVFALAKAPTQHPAKIYANRKDECEHGCSHVEKKP CCCCCCCCCCCCCCCEECCCCCCCCEEEEEECCCCCCCCEEECCCCHHHHHHHHHHCCCC LFKTSVLVKYDVGFNNQLYIRGNGANLTWNKGQPLKNIKADEWIWENETPFSSCEFKVLI CEEEEEEEEEECCCCCEEEEEECCCEEEECCCCCCCCCCCCCEEECCCCCCCCCEEEEEE NDNHYEAGENHTITNGCSFIYTPSFA CCCCCCCCCCCEECCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA