| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446040
Identifier: 46446040
GI number: 46446040
Start: 543349
End: 543534
Strand: Reverse
Name: 46446040
Synonym: pc0406
Alternate gene names: NA
Gene position: 543534-543349 (Counterclockwise)
Preceding gene: 46446041
Following gene: 46446039
Centisome position: 22.51
GC content: 27.96
Gene sequence:
>186_bases TTGCTTAATCTCTTTATTAAACAATCTTCTTTCTTACATACATGTGCTAAGTGTTTTTTGAATCGATATATTGCCTTAAG GAATAGATATTTGACAAAAGCGTCTTATTACAGCAAAAATACTACCTGTAAATTGAAATACTTTTTTTTTCATAGCTGCA GCAGGATTTTGAGCTATTTTATTTGA
Upstream 100 bases:
>100_bases TTGATCTAAACAAACTCTTTTTTAAAGCATTTAACACTTCAGTAGAAATATCATAATTTTTTATCATTATTTAATAAATT CATGGTTAATTGTTGAGATT
Downstream 100 bases:
>100_bases ATGCTATATTCAAATTAGAAGATAAAAAAGAATAGAAATATTGGATTAATTAATGTAAGTTGCAAATAACTAAGTTAAAA TAAAATTTAGATGTAAATAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 61; Mature: 61
Protein sequence:
>61_residues MLNLFIKQSSFLHTCAKCFLNRYIALRNRYLTKASYYSKNTTCKLKYFFFHSCSRILSYFI
Sequences:
>Translated_61_residues MLNLFIKQSSFLHTCAKCFLNRYIALRNRYLTKASYYSKNTTCKLKYFFFHSCSRILSYFI >Mature_61_residues MLNLFIKQSSFLHTCAKCFLNRYIALRNRYLTKASYYSKNTTCKLKYFFFHSCSRILSYFI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7409; Mature: 7409
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 8.2 %Cys+Met (Translated Protein) 6.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 8.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNLFIKQSSFLHTCAKCFLNRYIALRNRYLTKASYYSKNTTCKLKYFFFHSCSRILSYF CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHC I C >Mature Secondary Structure MLNLFIKQSSFLHTCAKCFLNRYIALRNRYLTKASYYSKNTTCKLKYFFFHSCSRILSYF CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHC I C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA