Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46445930

Identifier: 46445930

GI number: 46445930

Start: 409556

End: 409942

Strand: Reverse

Name: 46445930

Synonym: pc0296

Alternate gene names: NA

Gene position: 409942-409556 (Counterclockwise)

Preceding gene: 46445931

Following gene: 46445929

Centisome position: 16.98

GC content: 32.04

Gene sequence:

>387_bases
ATGAATAATATCAATTCTTGTGATTCTAGCACTATTGTTGAGCCTTGCTACACTTGTAAACGTTTTGAATTTGATGATCC
AAAAGATTATCAAAAACAATTGATCCGAACAATTATCCGGGTACTCGTACCTATTGATAGAATAGGTAAATGGAGTTGGT
ATTTGGTCAAAATATATAGCATTGCCCGACCTATCTTTAAAATCTTATTTCAAATATTTGAATTTATCAACCGATGTGCT
TGTTTGTTAGCAAAAGGGCTTATCTCAATAAAAACTAAATTAGTCGGAATCGATCTCCATATACATTTATTTACAGTTGT
TAACGTTCAACAACCTTGTTGTTCACACATAGCACATCGTTATACCGAAAATGCTTTATCAGTTTAG

Upstream 100 bases:

>100_bases
TTCAACACCACACTGATAATTTCTTAGAAAAAGTTTTAATTGCCAGAGATTTAGAGACAATCGAGCTTTTCCAAAAAAAT
ACAGAAAGAGTTAAAAGCTT

Downstream 100 bases:

>100_bases
ACAAAAAATGATATCTATTCTAAGGTAAAATATTGTTTCCCCTATTTTCATCTTTTTGATGATAAAAAGTGTATACTAAT
AAAATTTAACCAAGCTAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MNNINSCDSSTIVEPCYTCKRFEFDDPKDYQKQLIRTIIRVLVPIDRIGKWSWYLVKIYSIARPIFKILFQIFEFINRCA
CLLAKGLISIKTKLVGIDLHIHLFTVVNVQQPCCSHIAHRYTENALSV

Sequences:

>Translated_128_residues
MNNINSCDSSTIVEPCYTCKRFEFDDPKDYQKQLIRTIIRVLVPIDRIGKWSWYLVKIYSIARPIFKILFQIFEFINRCA
CLLAKGLISIKTKLVGIDLHIHLFTVVNVQQPCCSHIAHRYTENALSV
>Mature_128_residues
MNNINSCDSSTIVEPCYTCKRFEFDDPKDYQKQLIRTIIRVLVPIDRIGKWSWYLVKIYSIARPIFKILFQIFEFINRCA
CLLAKGLISIKTKLVGIDLHIHLFTVVNVQQPCCSHIAHRYTENALSV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14907; Mature: 14907

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
5.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNINSCDSSTIVEPCYTCKRFEFDDPKDYQKQLIRTIIRVLVPIDRIGKWSWYLVKIYS
CCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
IARPIFKILFQIFEFINRCACLLAKGLISIKTKLVGIDLHIHLFTVVNVQQPCCSHIAHR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHEEEHHHHHCCCHHHHHHHHHH
YTENALSV
HHHHHCCC
>Mature Secondary Structure
MNNINSCDSSTIVEPCYTCKRFEFDDPKDYQKQLIRTIIRVLVPIDRIGKWSWYLVKIYS
CCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
IARPIFKILFQIFEFINRCACLLAKGLISIKTKLVGIDLHIHLFTVVNVQQPCCSHIAHR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHEEEHHHHHCCCHHHHHHHHHH
YTENALSV
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA