Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46445913

Identifier: 46445913

GI number: 46445913

Start: 390366

End: 391883

Strand: Direct

Name: 46445913

Synonym: pc0279

Alternate gene names: NA

Gene position: 390366-391883 (Clockwise)

Preceding gene: 46445912

Following gene: 46445914

Centisome position: 16.17

GC content: 34.85

Gene sequence:

>1518_bases
TTGGAGGCAGGTACTTTTATTTCGTCGTTATTTCCAAGATGCGGGTCACTCTGCCTTAGTCGATACGTTAGCTTATCAAG
TATTAATAATTATTCGCATGAAAGTGTCACGGTTGATTTATATCGTCTTCCTGCTGCTCTAAAATTTGCTAATTATGATT
CGCTTCAAAAATTTGAAGTCTATTTAAATATTGTTGGTAAAGGAGATCGTAAAGATTCACTTTCACTTCCAGAAGAATTT
TTAGATGTAGTAGAAGTAGAAAGTGTTTATCCCGAACTTGTTCAAAAACGTTACGAATTAGAGGTCGCTCAAGTTTCTCA
AAAAGCTTTACAGGCTCGTATTGGAATTAAAGAGTTATGGAGTTGGGAAGTTGATGATAAGAATTGGGAAATACTTAAAG
CTCAATTTCCAGATTTAGCTTTAAGAAAAGCAATCACTCGTGAAGAACGTTTTAGTGTTTTAGATGACTTAGATAAAACA
ACGCGTTCGAAAGTCGATAGGTTTGCAAAAGAGGCTATAGTTCGCTCTCATCCAGAGTGGATTCTTGAAGGCTTATCTAA
AGTGAATTCTCAAAAAATGAATGTTGGACTGCGAACAACTGGTGGTAAAATTCCTTTTACAGGGTTGGATAAGAAGGAAA
AACGCCAAGAATTTATGCAATTACTAGATCATGCTATATTAGGGGCGGCTCCTACGGATGACTTGAAAGCATATACAGCT
GATAATCAAAATTACTACCAGATTAAAGTATTAAATCGTGCTCCTCAATCTGAAATTTTAACTTTTGAAGAAGCCAATCA
AGATGGAACGATGGATGAAGTACGTATGAAAGCTTTAGAAAAATATTACTTGGCAATCAGAGAGCAAAATCCTAGCACTT
ATCAAAAAGAAAATCAAGAATGGAAACCTTTTAAAAGTGTTCGAGAATTAGTTGCAGACGATTATTTTAGTAAGGTTTTA
ATAGCTTTACAACCTGCTCAGAAAACTCTCTTAGCTAGTGAGAAGGAAACTGCAAATTGGAGTAAAGATCAAGCGGCGTC
TCTTCGACTTTACTCCTATGTTCAACATATTAAAGCGAGACTAGAAAAAGATCCTTCATTAGCAACTCTATATGTAAAAA
ACCAAGAGTTAGAGCAAAAACCTGCATCCTTAAAAGATCAATGGTTATTAGAACGGACAAATGTCTCTTTAACTCGTCAA
GATCAAAAAGATGGTATCAATACAGAAGAAGCTTTTATTCTTCCTGTAACGGCTTGGTCCAATTTATCCACTCCAGTTAA
TGGAGATTTAGCATTTTTCCAAGTTAAAGAAAAAGGGGAAGATGTTTCTAAAAAGGAAGTTGCTATTGCTGAGCAAACTA
AAAAAGCTCAAGCCATTTTATCAATAGATGCTCAAAAAGTGTTAATGCACCACATCTTAGATAAAATTAAAGCTAAAGAT
GCTATTTCATTAAGTTACCTTCAAGTTTCCCAAGAGACTTCAACAGACGAATCAGCATTAGCAAATCCTGATTTTTAA

Upstream 100 bases:

>100_bases
AAAATCAAAATAATCCTTCAATTGGAGTACCTTCTCCAGAAGAATATTTCAATGAGCAGTTACGCCTCTTGAATATGGAT
CAGGCGAGAGCAATCAAAGT

Downstream 100 bases:

>100_bases
ATATTAAGAATCAGGAATCATATAACAATGATGGTTCCTGATTCTTTTTTACACGAAAGGGAAATTCTAGTTTTATGGAT
GAAAATGAATCTTTTTCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 505; Mature: 505

Protein sequence:

>505_residues
MEAGTFISSLFPRCGSLCLSRYVSLSSINNYSHESVTVDLYRLPAALKFANYDSLQKFEVYLNIVGKGDRKDSLSLPEEF
LDVVEVESVYPELVQKRYELEVAQVSQKALQARIGIKELWSWEVDDKNWEILKAQFPDLALRKAITREERFSVLDDLDKT
TRSKVDRFAKEAIVRSHPEWILEGLSKVNSQKMNVGLRTTGGKIPFTGLDKKEKRQEFMQLLDHAILGAAPTDDLKAYTA
DNQNYYQIKVLNRAPQSEILTFEEANQDGTMDEVRMKALEKYYLAIREQNPSTYQKENQEWKPFKSVRELVADDYFSKVL
IALQPAQKTLLASEKETANWSKDQAASLRLYSYVQHIKARLEKDPSLATLYVKNQELEQKPASLKDQWLLERTNVSLTRQ
DQKDGINTEEAFILPVTAWSNLSTPVNGDLAFFQVKEKGEDVSKKEVAIAEQTKKAQAILSIDAQKVLMHHILDKIKAKD
AISLSYLQVSQETSTDESALANPDF

Sequences:

>Translated_505_residues
MEAGTFISSLFPRCGSLCLSRYVSLSSINNYSHESVTVDLYRLPAALKFANYDSLQKFEVYLNIVGKGDRKDSLSLPEEF
LDVVEVESVYPELVQKRYELEVAQVSQKALQARIGIKELWSWEVDDKNWEILKAQFPDLALRKAITREERFSVLDDLDKT
TRSKVDRFAKEAIVRSHPEWILEGLSKVNSQKMNVGLRTTGGKIPFTGLDKKEKRQEFMQLLDHAILGAAPTDDLKAYTA
DNQNYYQIKVLNRAPQSEILTFEEANQDGTMDEVRMKALEKYYLAIREQNPSTYQKENQEWKPFKSVRELVADDYFSKVL
IALQPAQKTLLASEKETANWSKDQAASLRLYSYVQHIKARLEKDPSLATLYVKNQELEQKPASLKDQWLLERTNVSLTRQ
DQKDGINTEEAFILPVTAWSNLSTPVNGDLAFFQVKEKGEDVSKKEVAIAEQTKKAQAILSIDAQKVLMHHILDKIKAKD
AISLSYLQVSQETSTDESALANPDF
>Mature_505_residues
MEAGTFISSLFPRCGSLCLSRYVSLSSINNYSHESVTVDLYRLPAALKFANYDSLQKFEVYLNIVGKGDRKDSLSLPEEF
LDVVEVESVYPELVQKRYELEVAQVSQKALQARIGIKELWSWEVDDKNWEILKAQFPDLALRKAITREERFSVLDDLDKT
TRSKVDRFAKEAIVRSHPEWILEGLSKVNSQKMNVGLRTTGGKIPFTGLDKKEKRQEFMQLLDHAILGAAPTDDLKAYTA
DNQNYYQIKVLNRAPQSEILTFEEANQDGTMDEVRMKALEKYYLAIREQNPSTYQKENQEWKPFKSVRELVADDYFSKVL
IALQPAQKTLLASEKETANWSKDQAASLRLYSYVQHIKARLEKDPSLATLYVKNQELEQKPASLKDQWLLERTNVSLTRQ
DQKDGINTEEAFILPVTAWSNLSTPVNGDLAFFQVKEKGEDVSKKEVAIAEQTKKAQAILSIDAQKVLMHHILDKIKAKD
AISLSYLQVSQETSTDESALANPDF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57610; Mature: 57610

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAGTFISSLFPRCGSLCLSRYVSLSSINNYSHESVTVDLYRLPAALKFANYDSLQKFEV
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHCCHHHHHCCCCCHHEEEE
YLNIVGKGDRKDSLSLPEEFLDVVEVESVYPELVQKRYELEVAQVSQKALQARIGIKELW
EEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
SWEVDDKNWEILKAQFPDLALRKAITREERFSVLDDLDKTTRSKVDRFAKEAIVRSHPEW
CCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
ILEGLSKVNSQKMNVGLRTTGGKIPFTGLDKKEKRQEFMQLLDHAILGAAPTDDLKAYTA
HHHHHHHHCCHHHCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEC
DNQNYYQIKVLNRAPQSEILTFEEANQDGTMDEVRMKALEKYYLAIREQNPSTYQKENQE
CCCCEEEEEEECCCCHHHEEEHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCC
WKPFKSVRELVADDYFSKVLIALQPAQKTLLASEKETANWSKDQAASLRLYSYVQHIKAR
CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LEKDPSLATLYVKNQELEQKPASLKDQWLLERTNVSLTRQDQKDGINTEEAFILPVTAWS
HCCCCCEEEEEEECCHHHCCCCCCHHHHHHHHCCCCEEECHHHCCCCCCCEEEEEEEECC
NLSTPVNGDLAFFQVKEKGEDVSKKEVAIAEQTKKAQAILSIDAQKVLMHHILDKIKAKD
CCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
AISLSYLQVSQETSTDESALANPDF
CCEEHHEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEAGTFISSLFPRCGSLCLSRYVSLSSINNYSHESVTVDLYRLPAALKFANYDSLQKFEV
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHCCHHHHHCCCCCHHEEEE
YLNIVGKGDRKDSLSLPEEFLDVVEVESVYPELVQKRYELEVAQVSQKALQARIGIKELW
EEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
SWEVDDKNWEILKAQFPDLALRKAITREERFSVLDDLDKTTRSKVDRFAKEAIVRSHPEW
CCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
ILEGLSKVNSQKMNVGLRTTGGKIPFTGLDKKEKRQEFMQLLDHAILGAAPTDDLKAYTA
HHHHHHHHCCHHHCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEC
DNQNYYQIKVLNRAPQSEILTFEEANQDGTMDEVRMKALEKYYLAIREQNPSTYQKENQE
CCCCEEEEEEECCCCHHHEEEHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCC
WKPFKSVRELVADDYFSKVLIALQPAQKTLLASEKETANWSKDQAASLRLYSYVQHIKAR
CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LEKDPSLATLYVKNQELEQKPASLKDQWLLERTNVSLTRQDQKDGINTEEAFILPVTAWS
HCCCCCEEEEEEECCHHHCCCCCCHHHHHHHHCCCCEEECHHHCCCCCCCEEEEEEEECC
NLSTPVNGDLAFFQVKEKGEDVSKKEVAIAEQTKKAQAILSIDAQKVLMHHILDKIKAKD
CCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
AISLSYLQVSQETSTDESALANPDF
CCEEHHEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA