| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46445911
Identifier: 46445911
GI number: 46445911
Start: 387890
End: 389107
Strand: Reverse
Name: 46445911
Synonym: pc0277
Alternate gene names: NA
Gene position: 389107-387890 (Counterclockwise)
Preceding gene: 46445919
Following gene: 46445908
Centisome position: 16.12
GC content: 33.66
Gene sequence:
>1218_bases ATGACATCTCTTGCAAACTTTATATCTGACAGTTGGAACAATTTCTATGAACTAAATGTCTCCTATTATCATTCTCCGGA AGTAAATATAGAAGCTAATATTGATGATTATTCTTTTGACTCTCGCGAACCTGAGCAAGCAAAGCTAGTTGCAGACATTT TAGATTTCCATCTTGAAGTCAATGGTGCTAAAATCGGAGATTTTCTAAAAAAATCCTCTATTATTACCCCTCTAGACAGA TATCTGCTTAAACAAAATCAATTTGAACTTTACTCATCTTGCGATGATGTAGCAGGAGTTGTTCTTGGACATCCTCTGAT TCCTAATTTTCTCATCAAACAAAATTTTTCTATCACGACTTCTTTTGCACATCAAGGATCGGGAAAAATATTTAGATTTT GTTCTGCTGCCCGCGTTCCTTTTTGGCTTTGTCGATTTAAAGACTGGCTTTCACAAGATCGAACGAAAAATATCCGAGTT CCCAATGATGTGTTAAACCCTTTACGGGTTGTAACAATGAAAAAAGCTAGACAATACATAAAAAAACAGCATCTAGATCG GATTGAAGCGTGTAAAGAATACTTATTTCGCCTTCCTGATACCGCAACAAATGCACCAATTCATAAGAAATATGTTGTCA TATCAAAAAAAGTTTCTATTCTCAATCCATATGACAATATCCAAAAATTTATTGATTTAGCAAAAAACAATCCAAATGAA CTAGCTGAAATTCTTAAACAAGTCTGTTTAGTTATTAAGCACACTCATCTAACAGACATGCATATCAATAATATTCGATT TGCAGGCGATGGAAGTAATAAAGTTTATATATTTGACGGCGAGCCAATTGGAGGTCTTTCAGATATTTCTGAACCAGATG TCAAGAAACTATTCAAAGGTACTGACTTCGCGTTCTTTCCTATTTTAGGTATGAGAGTTTTACAAGAATCTTTGAAAGTT GCTTTTTCTGATTATTGCTTTAAAAATAGAGACTACTATGAAGTTCAAAATATTTTTGACAAAGTGATTGATCCCATTGT TGAGTCTATTACTCAGGATAGAATCCGTTATTATACCAAAATCATTATCAGTATTATCTGCCCAGCCGTTCCTTTATTTG TTATTGCTCGCGGCATATCTAATTATGTAGTTAATCATTTCCGCACTAATGATCCCATATTTTTTTTAGCTCATGATCGC TTAGTCAATTCCATCTGA
Upstream 100 bases:
>100_bases TTAAATCAATTAAAGAAAGTTTAATTAATAAATCAGTTTGATTTAAATTATCAGAGTAAATAAAATATTTCTCATAATTA ACTTTATGAGTAACAAAACA
Downstream 100 bases:
>100_bases ATCAAATCCCTTAGAGTTTGTCGAGCTTGCCTCAAGTCCTGAGCAGTCCAAGCTTCAGTAAGCAAACAATAAGATTGTTG TTTTATTGCACTAGTAACTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 405; Mature: 404
Protein sequence:
>405_residues MTSLANFISDSWNNFYELNVSYYHSPEVNIEANIDDYSFDSREPEQAKLVADILDFHLEVNGAKIGDFLKKSSIITPLDR YLLKQNQFELYSSCDDVAGVVLGHPLIPNFLIKQNFSITTSFAHQGSGKIFRFCSAARVPFWLCRFKDWLSQDRTKNIRV PNDVLNPLRVVTMKKARQYIKKQHLDRIEACKEYLFRLPDTATNAPIHKKYVVISKKVSILNPYDNIQKFIDLAKNNPNE LAEILKQVCLVIKHTHLTDMHINNIRFAGDGSNKVYIFDGEPIGGLSDISEPDVKKLFKGTDFAFFPILGMRVLQESLKV AFSDYCFKNRDYYEVQNIFDKVIDPIVESITQDRIRYYTKIIISIICPAVPLFVIARGISNYVVNHFRTNDPIFFLAHDR LVNSI
Sequences:
>Translated_405_residues MTSLANFISDSWNNFYELNVSYYHSPEVNIEANIDDYSFDSREPEQAKLVADILDFHLEVNGAKIGDFLKKSSIITPLDR YLLKQNQFELYSSCDDVAGVVLGHPLIPNFLIKQNFSITTSFAHQGSGKIFRFCSAARVPFWLCRFKDWLSQDRTKNIRV PNDVLNPLRVVTMKKARQYIKKQHLDRIEACKEYLFRLPDTATNAPIHKKYVVISKKVSILNPYDNIQKFIDLAKNNPNE LAEILKQVCLVIKHTHLTDMHINNIRFAGDGSNKVYIFDGEPIGGLSDISEPDVKKLFKGTDFAFFPILGMRVLQESLKV AFSDYCFKNRDYYEVQNIFDKVIDPIVESITQDRIRYYTKIIISIICPAVPLFVIARGISNYVVNHFRTNDPIFFLAHDR LVNSI >Mature_404_residues TSLANFISDSWNNFYELNVSYYHSPEVNIEANIDDYSFDSREPEQAKLVADILDFHLEVNGAKIGDFLKKSSIITPLDRY LLKQNQFELYSSCDDVAGVVLGHPLIPNFLIKQNFSITTSFAHQGSGKIFRFCSAARVPFWLCRFKDWLSQDRTKNIRVP NDVLNPLRVVTMKKARQYIKKQHLDRIEACKEYLFRLPDTATNAPIHKKYVVISKKVSILNPYDNIQKFIDLAKNNPNEL AEILKQVCLVIKHTHLTDMHINNIRFAGDGSNKVYIFDGEPIGGLSDISEPDVKKLFKGTDFAFFPILGMRVLQESLKVA FSDYCFKNRDYYEVQNIFDKVIDPIVESITQDRIRYYTKIIISIICPAVPLFVIARGISNYVVNHFRTNDPIFFLAHDRL VNSI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46684; Mature: 46553
Theoretical pI: Translated: 8.26; Mature: 8.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSLANFISDSWNNFYELNVSYYHSPEVNIEANIDDYSFDSREPEQAKLVADILDFHLEV CCHHHHHHHHCCCCEEEEEEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHEEE NGAKIGDFLKKSSIITPLDRYLLKQNQFELYSSCDDVAGVVLGHPLIPNFLIKQNFSITT CCCHHHHHHHHCCCCCHHHHHHHHCCCHHHHHCHHHHHHHHHCCCCCCCHHHHCCCCEEE SFAHQGSGKIFRFCSAARVPFWLCRFKDWLSQDRTKNIRVPNDVLNPLRVVTMKKARQYI EHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH KKQHLDRIEACKEYLFRLPDTATNAPIHKKYVVISKKVSILNPYDNIQKFIDLAKNNPNE HHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCEEEECCHHHHHHHHHHHCCCHHH LAEILKQVCLVIKHTHLTDMHINNIRFAGDGSNKVYIFDGEPIGGLSDISEPDVKKLFKG HHHHHHHHHHHHHHCCCCEEEECCEEEECCCCCEEEEECCCCCCCCCCCCCHHHHHHHCC TDFAFFPILGMRVLQESLKVAFSDYCFKNRDYYEVQNIFDKVIDPIVESITQDRIRYYTK CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IIISIICPAVPLFVIARGISNYVVNHFRTNDPIFFLAHDRLVNSI HHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEHHHHHHCC >Mature Secondary Structure TSLANFISDSWNNFYELNVSYYHSPEVNIEANIDDYSFDSREPEQAKLVADILDFHLEV CHHHHHHHHCCCCEEEEEEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHEEE NGAKIGDFLKKSSIITPLDRYLLKQNQFELYSSCDDVAGVVLGHPLIPNFLIKQNFSITT CCCHHHHHHHHCCCCCHHHHHHHHCCCHHHHHCHHHHHHHHHCCCCCCCHHHHCCCCEEE SFAHQGSGKIFRFCSAARVPFWLCRFKDWLSQDRTKNIRVPNDVLNPLRVVTMKKARQYI EHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH KKQHLDRIEACKEYLFRLPDTATNAPIHKKYVVISKKVSILNPYDNIQKFIDLAKNNPNE HHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCEEEECCHHHHHHHHHHHCCCHHH LAEILKQVCLVIKHTHLTDMHINNIRFAGDGSNKVYIFDGEPIGGLSDISEPDVKKLFKG HHHHHHHHHHHHHHCCCCEEEECCEEEECCCCCEEEEECCCCCCCCCCCCCHHHHHHHCC TDFAFFPILGMRVLQESLKVAFSDYCFKNRDYYEVQNIFDKVIDPIVESITQDRIRYYTK CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IIISIICPAVPLFVIARGISNYVVNHFRTNDPIFFLAHDRLVNSI HHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA