| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is mrp [H]
Identifier: 46445888
GI number: 46445888
Start: 360520
End: 361380
Strand: Direct
Name: mrp [H]
Synonym: pc0254
Alternate gene names: 46445888
Gene position: 360520-361380 (Clockwise)
Preceding gene: 46445885
Following gene: 46445889
Centisome position: 14.93
GC content: 38.79
Gene sequence:
>861_bases ATGCCTTTAGAAATGTATCAAGCTATTCCACCTTTAGCTTCTATTAAATCGACTATCGGTATCGCAGCTGGAAAAGGGGG GGTAGGAAAGTCAACTGTTACTGTTAATTTAGCGCTAGCTTTAAAAGGTCTGGGATATCGTATAGGTATCATGGATACAG ATCTTTATGGTCCATCCATCAGGAAAATGTTGCCTGAAGATCGCTTACCTTCTCAAAAAGGAGAAATCATTCAACCTGCG CTCTGCAACGGAATTAAAATGATTTCAATGGCTTATTTTAGAAAAGAGACAGAAGCGACTGCTGTAAGAGCACCTATTGC CAATAGACTAATTTCTCAGTTTATTAATCAGGTAGCTTGGGGTGAGCTAGACTATTTATTGATAGATTTTCCTCCTGGCA CAGGTGATATTCAAATTACTCTAAGTCAAAAATCTCATTTAACAGGGGCCTTATTGGTAACGACACCACAAGAAGTAGCT CTTTTAGATGTGCAGAAAGCTATGTCGCTGTTCAATCAAGTTAAAGTACCAATTGTTGGTATCGTCGAAAATATGAGTTA TTATGTAGACCCCCATTCAAATGAGCCTGTTTATTTATTTGGAAAAGAGGGGGGGAAGCGGTTAGCTCGCGAAACTGGCT ACCCTTGTTTAGGGCAGATACCTTTAGATCCTTTGGTGGGAACTTGTGGGGATAAAGGGAAATCTTTGTTCTCCATGGAT TCTCAATCTGAAAAAGCTGTTACTCTAGCGTTTATTCAATTAGCTCAGTTGCTTGTTGAACAAGTAGAATCTATCCAAAA TCAAATGAATACGACTTTGTCAAATGTCGAGCTTGTTTGGAAGGAAATGAAACATATATGA
Upstream 100 bases:
>100_bases ATAAGTTTTACTAGTCAACCAAAATTCAATGAATTACACTATATTTCATGATCATCTGAATAAAAAAAATTAATTAACGG ATTGTTTATGGGAGTAAGCT
Downstream 100 bases:
>100_bases ATTTACCTATCGCTATTAATCAAATTCTTCAAAAAGATAATCATACTTTTTTAGTTATTTGGAGCGATGGAAAAAAACAG GAATTTCGCTTGAGTCAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MPLEMYQAIPPLASIKSTIGIAAGKGGVGKSTVTVNLALALKGLGYRIGIMDTDLYGPSIRKMLPEDRLPSQKGEIIQPA LCNGIKMISMAYFRKETEATAVRAPIANRLISQFINQVAWGELDYLLIDFPPGTGDIQITLSQKSHLTGALLVTTPQEVA LLDVQKAMSLFNQVKVPIVGIVENMSYYVDPHSNEPVYLFGKEGGKRLARETGYPCLGQIPLDPLVGTCGDKGKSLFSMD SQSEKAVTLAFIQLAQLLVEQVESIQNQMNTTLSNVELVWKEMKHI
Sequences:
>Translated_286_residues MPLEMYQAIPPLASIKSTIGIAAGKGGVGKSTVTVNLALALKGLGYRIGIMDTDLYGPSIRKMLPEDRLPSQKGEIIQPA LCNGIKMISMAYFRKETEATAVRAPIANRLISQFINQVAWGELDYLLIDFPPGTGDIQITLSQKSHLTGALLVTTPQEVA LLDVQKAMSLFNQVKVPIVGIVENMSYYVDPHSNEPVYLFGKEGGKRLARETGYPCLGQIPLDPLVGTCGDKGKSLFSMD SQSEKAVTLAFIQLAQLLVEQVESIQNQMNTTLSNVELVWKEMKHI >Mature_285_residues PLEMYQAIPPLASIKSTIGIAAGKGGVGKSTVTVNLALALKGLGYRIGIMDTDLYGPSIRKMLPEDRLPSQKGEIIQPAL CNGIKMISMAYFRKETEATAVRAPIANRLISQFINQVAWGELDYLLIDFPPGTGDIQITLSQKSHLTGALLVTTPQEVAL LDVQKAMSLFNQVKVPIVGIVENMSYYVDPHSNEPVYLFGKEGGKRLARETGYPCLGQIPLDPLVGTCGDKGKSLFSMDS QSEKAVTLAFIQLAQLLVEQVESIQNQMNTTLSNVELVWKEMKHI
Specific function: Not Known. [C]
COG id: COG0489
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Mrp/NBP35 ATP-binding proteins family [H]
Homologues:
Organism=Homo sapiens, GI157384956, Length=266, Percent_Identity=37.9699248120301, Blast_Score=182, Evalue=3e-46, Organism=Homo sapiens, GI6912540, Length=221, Percent_Identity=42.5339366515837, Blast_Score=170, Evalue=2e-42, Organism=Homo sapiens, GI118572611, Length=273, Percent_Identity=35.1648351648352, Blast_Score=159, Evalue=2e-39, Organism=Escherichia coli, GI87082045, Length=255, Percent_Identity=40.3921568627451, Blast_Score=183, Evalue=1e-47, Organism=Caenorhabditis elegans, GI25143050, Length=259, Percent_Identity=39.3822393822394, Blast_Score=155, Evalue=2e-38, Organism=Saccharomyces cerevisiae, GI6322188, Length=223, Percent_Identity=42.6008968609865, Blast_Score=172, Evalue=8e-44, Organism=Saccharomyces cerevisiae, GI6321347, Length=263, Percent_Identity=34.9809885931559, Blast_Score=146, Evalue=5e-36, Organism=Drosophila melanogaster, GI24667611, Length=258, Percent_Identity=38.3720930232558, Blast_Score=161, Evalue=4e-40, Organism=Drosophila melanogaster, GI221511043, Length=265, Percent_Identity=34.7169811320755, Blast_Score=147, Evalue=9e-36, Organism=Drosophila melanogaster, GI19921440, Length=255, Percent_Identity=32.9411764705882, Blast_Score=112, Evalue=2e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019591 - InterPro: IPR000808 [H]
Pfam domain/function: PF10609 ParA [H]
EC number: NA
Molecular weight: Translated: 31208; Mature: 31077
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: PS01215 MRP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLEMYQAIPPLASIKSTIGIAAGKGGVGKSTVTVNLALALKGLGYRIGIMDTDLYGPSI CCCCHHHHCCCHHHHHHHHEEECCCCCCCCCEEEEEEEEEECCCCEEEEEEECCCCCCHH RKMLPEDRLPSQKGEIIQPALCNGIKMISMAYFRKETEATAVRAPIANRLISQFINQVAW HHHCCCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GELDYLLIDFPPGTGDIQITLSQKSHLTGALLVTTPQEVALLDVQKAMSLFNQVKVPIVG CCCCEEEEEECCCCCCEEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCEE IVENMSYYVDPHSNEPVYLFGKEGGKRLARETGYPCLGQIPLDPLVGTCGDKGKSLFSMD EEECCEEEECCCCCCCEEEEECCCCHHHHHHCCCCEECCCCCCHHHCCCCCCCCEEEECC SQSEKAVTLAFIQLAQLLVEQVESIQNQMNTTLSNVELVWKEMKHI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PLEMYQAIPPLASIKSTIGIAAGKGGVGKSTVTVNLALALKGLGYRIGIMDTDLYGPSI CCCHHHHCCCHHHHHHHHEEECCCCCCCCCEEEEEEEEEECCCCEEEEEEECCCCCCHH RKMLPEDRLPSQKGEIIQPALCNGIKMISMAYFRKETEATAVRAPIANRLISQFINQVAW HHHCCCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GELDYLLIDFPPGTGDIQITLSQKSHLTGALLVTTPQEVALLDVQKAMSLFNQVKVPIVG CCCCEEEEEECCCCCCEEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCEE IVENMSYYVDPHSNEPVYLFGKEGGKRLARETGYPCLGQIPLDPLVGTCGDKGKSLFSMD EEECCEEEECCCCCCCEEEEECCCCHHHHHHCCCCEECCCCCCHHHCCCCCCCCEEEECC SQSEKAVTLAFIQLAQLLVEQVESIQNQMNTTLSNVELVWKEMKHI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]