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The map label for this gene is scpA [H]

Identifier: 46445845

GI number: 46445845

Start: 305568

End: 306299

Strand: Reverse

Name: scpA [H]

Synonym: pc0211

Alternate gene names: 46445845

Gene position: 306299-305568 (Counterclockwise)

Preceding gene: 46445846

Following gene: 46445844

Centisome position: 12.69

GC content: 31.69

Gene sequence:

>732_bases
TTGTTTATGATTCAAACTTACAATCGTTTCTCTTTAGAAAATTTTGAAGGACCCCTAGAGTTTCTCCTTTCATTGATTCA
AAAAGAAGAAATCAATATTTATGATGTTTCTATTCAAGAGCTCACTCAACAATTTCTAGAAAAATTGAAAGAATGGGAAA
CTCATTATTTAGAAAAAGGAGCCGAATTTGTAGGAAGCGCTTCTTATTTAGTTTGGTTGAAAAGTAAAATGTTGCTACCA
ATTGAGGAACTTTCTTTAGAAGCAGAAACAGTTCAGGAAGATCCTCATTTTGAAATTATTCATCACCTTTTGGATTACTG
TCGTTTTAAGCAAGCTGCTAAAGAACTTTCAGCCAGACAGGATAAGCAACTAGCATGCTATTTCCGGGGAACTTCAGAGA
ATGCGTGGAAAAAACCTTTGGGATTAAAAGATATTTCACTAGAAGAATTATCAATTTTATTTAAGGAAATGACCAAACGT
GCAGAACGAGTGAAAGGAAAAATTCTAGAAGAAAATTGGCGTGTAAGTGATAAAATTCGCTTCATAAAATTACAACTACA
AAAACAATCTTCTTTTCCTTTTGATTATTTATTTTTATCAGATATGCCTCGCTTAGAATTAATTGTCATCTTTTTAGCTA
TTTTAGAATTGATGAAAATTGGAAGTATAGGTATTGGCAAAAATCCCGAATCTCAGGTTTTGGTATATCTTAAGCAAAAG
GATGATAAATGA

Upstream 100 bases:

>100_bases
ATTTTAGATACATGTTAAATGTTTAAATCAACACAATCTCAGTAGCATAAGAAATCAGATTTAGGTATTTTATTCTGCAA
ATACTAGAAAATATAGATTT

Downstream 100 bases:

>100_bases
GTAAAGAGTGGAATTTTTTTCAGGCTGAATTTGCTTTTCCTTCGTCTCGAGATCAAAAACCATCTCCTACTACTTCAACC
TCTATTCATGAAAAACCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MFMIQTYNRFSLENFEGPLEFLLSLIQKEEINIYDVSIQELTQQFLEKLKEWETHYLEKGAEFVGSASYLVWLKSKMLLP
IEELSLEAETVQEDPHFEIIHHLLDYCRFKQAAKELSARQDKQLACYFRGTSENAWKKPLGLKDISLEELSILFKEMTKR
AERVKGKILEENWRVSDKIRFIKLQLQKQSSFPFDYLFLSDMPRLELIVIFLAILELMKIGSIGIGKNPESQVLVYLKQK
DDK

Sequences:

>Translated_243_residues
MFMIQTYNRFSLENFEGPLEFLLSLIQKEEINIYDVSIQELTQQFLEKLKEWETHYLEKGAEFVGSASYLVWLKSKMLLP
IEELSLEAETVQEDPHFEIIHHLLDYCRFKQAAKELSARQDKQLACYFRGTSENAWKKPLGLKDISLEELSILFKEMTKR
AERVKGKILEENWRVSDKIRFIKLQLQKQSSFPFDYLFLSDMPRLELIVIFLAILELMKIGSIGIGKNPESQVLVYLKQK
DDK
>Mature_243_residues
MFMIQTYNRFSLENFEGPLEFLLSLIQKEEINIYDVSIQELTQQFLEKLKEWETHYLEKGAEFVGSASYLVWLKSKMLLP
IEELSLEAETVQEDPHFEIIHHLLDYCRFKQAAKELSARQDKQLACYFRGTSENAWKKPLGLKDISLEELSILFKEMTKR
AERVKGKILEENWRVSDKIRFIKLQLQKQSSFPFDYLFLSDMPRLELIVIFLAILELMKIGSIGIGKNPESQVLVYLKQK
DDK

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003768 [H]

Pfam domain/function: PF02616 ScpA_ScpB [H]

EC number: NA

Molecular weight: Translated: 28652; Mature: 28652

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFMIQTYNRFSLENFEGPLEFLLSLIQKEEINIYDVSIQELTQQFLEKLKEWETHYLEKG
CEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHH
AEFVGSASYLVWLKSKMLLPIEELSLEAETVQEDPHFEIIHHLLDYCRFKQAAKELSARQ
HHHHCCCHHHEEECCCCCCCHHHHHCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
DKQLACYFRGTSENAWKKPLGLKDISLEELSILFKEMTKRAERVKGKILEENWRVSDKIR
CCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEE
FIKLQLQKQSSFPFDYLFLSDMPRLELIVIFLAILELMKIGSIGIGKNPESQVLVYLKQK
EEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECC
DDK
CCC
>Mature Secondary Structure
MFMIQTYNRFSLENFEGPLEFLLSLIQKEEINIYDVSIQELTQQFLEKLKEWETHYLEKG
CEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHH
AEFVGSASYLVWLKSKMLLPIEELSLEAETVQEDPHFEIIHHLLDYCRFKQAAKELSARQ
HHHHCCCHHHEEECCCCCCCHHHHHCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
DKQLACYFRGTSENAWKKPLGLKDISLEELSILFKEMTKRAERVKGKILEENWRVSDKIR
CCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEE
FIKLQLQKQSSFPFDYLFLSDMPRLELIVIFLAILELMKIGSIGIGKNPESQVLVYLKQK
EEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECC
DDK
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]