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The map label for this gene is ppaA

Identifier: 46445833

GI number: 46445833

Start: 294072

End: 295085

Strand: Direct

Name: ppaA

Synonym: pc0199

Alternate gene names: NA

Gene position: 294072-295085 (Clockwise)

Preceding gene: 46445832

Following gene: 46445847

Centisome position: 12.18

GC content: 45.96

Gene sequence:

>1014_bases
TTGAGACCTTTAGTGGCTTTACAACATTTAGAACTGGGGTGCTGTAAGCTCACGGACGCTGGATTAGCGCATTTGAAATC
TTTAGTGGCTCTGCAGCATTTGAATCTGAGTTGGTGCGATAATCTCACCGACACTGGATTAGCGCATTTGACTCCCTTAA
CCGCTTTACAGCATTTAAATCTGAGTGTGTGCGGTAAGCTCACGGGCGCTGGATTAGCGCATTTGACTCCCTTAGTGGCT
TTAGAAAATTTAGATCTGAGTCAGTGCGGTAAGCTCACGGACGCTGGATTAGCGCATTTGACTCCCTTAGTGGCTTTACA
ACATTTAGGTATGAGGGGATGCCGTAAGCTCACGGACGTTGGATTAGCGCATTTGAGGCCCTTAGTGGCTTTGCAGCATT
TGGATCTGGATGGGTGCAGTAATCTCACTGATGCTGGATTAGCGCATTTGAGGCCCTTAGTGGCTTTGCAGCATTTAAAT
CTGAAAAGGTGTGATAATCTCACGGACATTGGATTAGCTCATTTGAGGCCCTTAGTGGCTTTGCAGCATTTGGATCTGGA
TGGGTGCAATAATCTCACTGATGCTGGATTAGCGCATTTGACTCCCTTAGTGGCTTTACAACATTTAAATCTGAGGGGAT
GCTTTAAATTCACGGACGCTGGATTAGCGCATTTGACACCCTTAGTGGCTTTGCAGTATTTAAACTTGAGTGATTGCAGT
AATCTCACGGACGCTGGATTAGCGCATTTGAAATCTCTAGTGGCTCTGCAGCATTTGAATCTGAGTTGGTGCAGTAAGCT
CACGGGCGCTGGATTAGCGCATTTGACACCCTTAGTGGCTTTAGAAGATTTAGATCTGAGTCAGTGCGGTAAGCTCACGG
ACGCTGGATTAGCCCATTTGGCACTCTTAACCGCTTTACAGTATTTAAACCTGGAGAGGTGCCGTAAGCTCACGGACGCT
GGATTAGCGCATTTTAAAACCTTGGCAGCTTCAATCTATTTAAACCTTCAATAA

Upstream 100 bases:

>100_bases
ATCTCACGGACATTGGATTAGCGCATTTGAGGCCCTTAGTGGCTTTGCAGCATTTGGATCTGGATGGGTGCAATAATCTC
ACTGATGCTGGATTAGCTCA

Downstream 100 bases:

>100_bases
AAAAAGAAACTTGACGCCGAAAATAAGAGTTACCTGTCCTAAGAAAATAAAGGATGAAGTTTTATTAAAGTTTATTAAGT
CTCATCCAGATAGCCTATTT

Product: putative F-box protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MRPLVALQHLELGCCKLTDAGLAHLKSLVALQHLNLSWCDNLTDTGLAHLTPLTALQHLNLSVCGKLTGAGLAHLTPLVA
LENLDLSQCGKLTDAGLAHLTPLVALQHLGMRGCRKLTDVGLAHLRPLVALQHLDLDGCSNLTDAGLAHLRPLVALQHLN
LKRCDNLTDIGLAHLRPLVALQHLDLDGCNNLTDAGLAHLTPLVALQHLNLRGCFKFTDAGLAHLTPLVALQYLNLSDCS
NLTDAGLAHLKSLVALQHLNLSWCSKLTGAGLAHLTPLVALEDLDLSQCGKLTDAGLAHLALLTALQYLNLERCRKLTDA
GLAHFKTLAASIYLNLQ

Sequences:

>Translated_337_residues
MRPLVALQHLELGCCKLTDAGLAHLKSLVALQHLNLSWCDNLTDTGLAHLTPLTALQHLNLSVCGKLTGAGLAHLTPLVA
LENLDLSQCGKLTDAGLAHLTPLVALQHLGMRGCRKLTDVGLAHLRPLVALQHLDLDGCSNLTDAGLAHLRPLVALQHLN
LKRCDNLTDIGLAHLRPLVALQHLDLDGCNNLTDAGLAHLTPLVALQHLNLRGCFKFTDAGLAHLTPLVALQYLNLSDCS
NLTDAGLAHLKSLVALQHLNLSWCSKLTGAGLAHLTPLVALEDLDLSQCGKLTDAGLAHLALLTALQYLNLERCRKLTDA
GLAHFKTLAASIYLNLQ
>Mature_337_residues
MRPLVALQHLELGCCKLTDAGLAHLKSLVALQHLNLSWCDNLTDTGLAHLTPLTALQHLNLSVCGKLTGAGLAHLTPLVA
LENLDLSQCGKLTDAGLAHLTPLVALQHLGMRGCRKLTDVGLAHLRPLVALQHLDLDGCSNLTDAGLAHLRPLVALQHLN
LKRCDNLTDIGLAHLRPLVALQHLDLDGCNNLTDAGLAHLTPLVALQHLNLRGCFKFTDAGLAHLTPLVALQYLNLSDCS
NLTDAGLAHLKSLVALQHLNLSWCSKLTGAGLAHLTPLVALEDLDLSQCGKLTDAGLAHLALLTALQYLNLERCRKLTDA
GLAHFKTLAASIYLNLQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI22748931, Length=304, Percent_Identity=34.5394736842105, Blast_Score=139, Evalue=3e-33,
Organism=Homo sapiens, GI284447308, Length=326, Percent_Identity=32.2085889570552, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI27734755, Length=280, Percent_Identity=36.0714285714286, Blast_Score=109, Evalue=3e-24,
Organism=Homo sapiens, GI161333852, Length=279, Percent_Identity=27.9569892473118, Blast_Score=102, Evalue=5e-22,
Organism=Homo sapiens, GI296531375, Length=275, Percent_Identity=34.9090909090909, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI6912466, Length=288, Percent_Identity=30.9027777777778, Blast_Score=98, Evalue=8e-21,
Organism=Homo sapiens, GI161333854, Length=330, Percent_Identity=26.0606060606061, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI284447314, Length=241, Percent_Identity=33.6099585062241, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI289666746, Length=216, Percent_Identity=33.3333333333333, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI25151696, Length=307, Percent_Identity=29.3159609120521, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI25151694, Length=307, Percent_Identity=29.3159609120521, Blast_Score=97, Evalue=1e-20,
Organism=Saccharomyces cerevisiae, GI6322549, Length=183, Percent_Identity=31.1475409836066, Blast_Score=72, Evalue=1e-13,
Organism=Drosophila melanogaster, GI17647819, Length=291, Percent_Identity=33.6769759450172, Blast_Score=130, Evalue=1e-30,
Organism=Drosophila melanogaster, GI24662818, Length=238, Percent_Identity=33.6134453781513, Blast_Score=92, Evalue=5e-19,
Organism=Drosophila melanogaster, GI21357913, Length=245, Percent_Identity=33.0612244897959, Blast_Score=88, Evalue=7e-18,
Organism=Drosophila melanogaster, GI161076547, Length=317, Percent_Identity=29.9684542586751, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI161076549, Length=317, Percent_Identity=29.9684542586751, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24652783, Length=317, Percent_Identity=29.9684542586751, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI161076545, Length=317, Percent_Identity=29.9684542586751, Blast_Score=83, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24646754, Length=212, Percent_Identity=32.5471698113208, Blast_Score=66, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35993; Mature: 35993

Theoretical pI: Translated: 7.20; Mature: 7.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPLVALQHLELGCCKLTDAGLAHLKSLVALQHLNLSWCDNLTDTGLAHLTPLTALQHLN
CCCHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHCC
LSVCGKLTGAGLAHLTPLVALENLDLSQCGKLTDAGLAHLTPLVALQHLGMRGCRKLTDV
HHHHHHHHCCCHHHHHHHHHHCCCCHHHHCCCHHCHHHHHHHHHHHHHHCHHHHHHHHHH
GLAHLRPLVALQHLDLDGCSNLTDAGLAHLRPLVALQHLNLKRCDNLTDIGLAHLRPLVA
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHH
LQHLDLDGCNNLTDAGLAHLTPLVALQHLNLRGCFKFTDAGLAHLTPLVALQYLNLSDCS
HHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHCCHHHHC
NLTDAGLAHLKSLVALQHLNLSWCSKLTGAGLAHLTPLVALEDLDLSQCGKLTDAGLAHL
CCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCCCCHHHHCCCHHHHHHHH
ALLTALQYLNLERCRKLTDAGLAHFKTLAASIYLNLQ
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHEEECC
>Mature Secondary Structure
MRPLVALQHLELGCCKLTDAGLAHLKSLVALQHLNLSWCDNLTDTGLAHLTPLTALQHLN
CCCHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHCC
LSVCGKLTGAGLAHLTPLVALENLDLSQCGKLTDAGLAHLTPLVALQHLGMRGCRKLTDV
HHHHHHHHCCCHHHHHHHHHHCCCCHHHHCCCHHCHHHHHHHHHHHHHHCHHHHHHHHHH
GLAHLRPLVALQHLDLDGCSNLTDAGLAHLRPLVALQHLNLKRCDNLTDIGLAHLRPLVA
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHH
LQHLDLDGCNNLTDAGLAHLTPLVALQHLNLRGCFKFTDAGLAHLTPLVALQYLNLSDCS
HHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHCCHHHHC
NLTDAGLAHLKSLVALQHLNLSWCSKLTGAGLAHLTPLVALEDLDLSQCGKLTDAGLAHL
CCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCCCCHHHHCCCHHHHHHHH
ALLTALQYLNLERCRKLTDAGLAHFKTLAASIYLNLQ
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA