Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46445819

Identifier: 46445819

GI number: 46445819

Start: 275537

End: 276901

Strand: Reverse

Name: 46445819

Synonym: pc0185

Alternate gene names: NA

Gene position: 276901-275537 (Counterclockwise)

Preceding gene: 46445828

Following gene: 46445817

Centisome position: 11.47

GC content: 32.67

Gene sequence:

>1365_bases
TTGAGTTTAGATTATATGGCACGTTTTTTTGATAAACAACTCTCTTTAATCATTCTTATCTTTTTGATGCCTCTCTTTTT
TCTCCCTAAAATCAACCTCTTAACAGTTGGTTCCGAAACGGCAGGTTTGAGAATTGATGATCTATTTCTCCTTTTCTTTG
GCACACTGTTAATTTGGGCTCACCTTCTTTTAGATAAACGCTTGTACATGATTGAAATTTGGGTGCTCATTTTAACTTTA
TTTGGCATTCTGTCATTTGCTTCTAATCGGTTTTTAATTTCGCTTGGATATCATTTTTTAGATGCAAAAATTTTTTACGC
AGTCCGCCTGCTAGAATATTTTTTATTTTTCTACATTGGAACTTTGGCTTTTCGATTTCATTTGAGTAAAGGCTTTATAC
AAGCGTTCTTTTTATGGAATTTTTTCCTAATGACTTTACAAAAGTTAAATTTAGCAGGAGCTATCACAAATTTAGGATAC
GAAAAAGATGTTTCAACAAGGGTGCAAGGAATCGCCTCTTTCCCTTCCGAGATGGGATTATTACTTAATCTATTATTTTG
CTACATGATATATGATGATAGCTATCGATCGAAAATCATTCAGATATTCCCTCCTTATTATCGCTATTTTCTTCGCAAAA
GCTATTTATATGTTCTGTTTATCGTCATTGGCATTTTTGTGATATTTACAGGTAATCGTATTTCTCTCCTTGCCCATTTG
ATCTGTTTTTTAGGTAAACTCAAACAGGAAATTAATTGGAAATCGATTGGATCTTTTGTTTCTTTGACAATTGCTTTTCC
TCTTTTAATGGGAATCATTATTTATATGGTGATACAAACAGATTCTATCTATAGCCGTAGCGCCAGCCTACTTTCTATAA
AAAATATTCATTTAGCACAAATTGTTTGGGATAAAATTGATCTAACTCAAGATCCCATTAGCAAAAAATTGATAGAGACT
GATGAATATGATATGAGCTGGTGGCTGCGCATCCATAAATGGATTTTTGTGACTAAAGCTTTTGTCAATCATCCTGAAGT
TTATTTACAAGGATTAGGACCTGGATTTGCCTGGTCGGCATTAGATGGAGGAATATTAAGAATCATTGTAGAGTATGGCC
TAATTGGCTCTCTACTTTTTTTCAATTTTTTTAGATCTATTTACAAAATTAACCAACAAATGAAATGGATGACAATTTCT
TTACTCATCAATATGATTTTTTTTGATGCTCACCTCGCTTATAAAACAATGAGTTTTTACTTATTTGCCGCTGGTTACTG
CTTTGAATCTAAGCATAATCACTCTTTAACTGCTAGCTCTACTCGTGCTAACCAGTTAAAACCTGAATTAATATTCTTTT
CTTAG

Upstream 100 bases:

>100_bases
ATGATCGGTCATTAATCGTAAGCTCAAACTAATAAGGTGAGATAGCGAAGATATCCTTTTCAAGATTGGTGGGTTATGCT
TTAATCATCAACTGACACAT

Downstream 100 bases:

>100_bases
TGACAATCTGAGCACTTTAGTTGCCTAATGAGATAGAACAACATTTTATGTTGGGTAAAAGATAGCAATCACATAACTTC
TAAACAAACCTGAAGGAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 454; Mature: 453

Protein sequence:

>454_residues
MSLDYMARFFDKQLSLIILIFLMPLFFLPKINLLTVGSETAGLRIDDLFLLFFGTLLIWAHLLLDKRLYMIEIWVLILTL
FGILSFASNRFLISLGYHFLDAKIFYAVRLLEYFLFFYIGTLAFRFHLSKGFIQAFFLWNFFLMTLQKLNLAGAITNLGY
EKDVSTRVQGIASFPSEMGLLLNLLFCYMIYDDSYRSKIIQIFPPYYRYFLRKSYLYVLFIVIGIFVIFTGNRISLLAHL
ICFLGKLKQEINWKSIGSFVSLTIAFPLLMGIIIYMVIQTDSIYSRSASLLSIKNIHLAQIVWDKIDLTQDPISKKLIET
DEYDMSWWLRIHKWIFVTKAFVNHPEVYLQGLGPGFAWSALDGGILRIIVEYGLIGSLLFFNFFRSIYKINQQMKWMTIS
LLINMIFFDAHLAYKTMSFYLFAAGYCFESKHNHSLTASSTRANQLKPELIFFS

Sequences:

>Translated_454_residues
MSLDYMARFFDKQLSLIILIFLMPLFFLPKINLLTVGSETAGLRIDDLFLLFFGTLLIWAHLLLDKRLYMIEIWVLILTL
FGILSFASNRFLISLGYHFLDAKIFYAVRLLEYFLFFYIGTLAFRFHLSKGFIQAFFLWNFFLMTLQKLNLAGAITNLGY
EKDVSTRVQGIASFPSEMGLLLNLLFCYMIYDDSYRSKIIQIFPPYYRYFLRKSYLYVLFIVIGIFVIFTGNRISLLAHL
ICFLGKLKQEINWKSIGSFVSLTIAFPLLMGIIIYMVIQTDSIYSRSASLLSIKNIHLAQIVWDKIDLTQDPISKKLIET
DEYDMSWWLRIHKWIFVTKAFVNHPEVYLQGLGPGFAWSALDGGILRIIVEYGLIGSLLFFNFFRSIYKINQQMKWMTIS
LLINMIFFDAHLAYKTMSFYLFAAGYCFESKHNHSLTASSTRANQLKPELIFFS
>Mature_453_residues
SLDYMARFFDKQLSLIILIFLMPLFFLPKINLLTVGSETAGLRIDDLFLLFFGTLLIWAHLLLDKRLYMIEIWVLILTLF
GILSFASNRFLISLGYHFLDAKIFYAVRLLEYFLFFYIGTLAFRFHLSKGFIQAFFLWNFFLMTLQKLNLAGAITNLGYE
KDVSTRVQGIASFPSEMGLLLNLLFCYMIYDDSYRSKIIQIFPPYYRYFLRKSYLYVLFIVIGIFVIFTGNRISLLAHLI
CFLGKLKQEINWKSIGSFVSLTIAFPLLMGIIIYMVIQTDSIYSRSASLLSIKNIHLAQIVWDKIDLTQDPISKKLIETD
EYDMSWWLRIHKWIFVTKAFVNHPEVYLQGLGPGFAWSALDGGILRIIVEYGLIGSLLFFNFFRSIYKINQQMKWMTISL
LINMIFFDAHLAYKTMSFYLFAAGYCFESKHNHSLTASSTRANQLKPELIFFS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53021; Mature: 52890

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHCCCCCCCCCCCCCCHHHCCCCCEEEEC
>Mature Secondary Structure 
SLDYMARFFDKQLSLIILIFLMPLFFLPKINLLTVGSETAGLRIDDLFLLFFGTLLIWA
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHH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HHHHHHHCCCCCCCCCCCCCCHHHCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA