Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46445763

Identifier: 46445763

GI number: 46445763

Start: 199698

End: 200579

Strand: Reverse

Name: 46445763

Synonym: pc0129

Alternate gene names: NA

Gene position: 200579-199698 (Counterclockwise)

Preceding gene: 46445764

Following gene: 46445762

Centisome position: 8.31

GC content: 35.26

Gene sequence:

>882_bases
ATGAATATAATTAAACTAGAAAATCGAACTGAAGACGGAGAAAAACTAGAGGCTACTTTTGCTCCTGACCATGGACTAAA
TCTCATCAGCTTCAAAAGAGGAAATATTGAAGTCATTGAACAATCGACTTGGAATCTTTTTGAAGAGCGATTTGCTGGTT
TAGGAGCATTAATTGGTCCACACTTTCATCGCCGACGAGCAGAAAGCCTTCCTAAAATTGCAGATGAAACACTTTTTCCC
CACATTGGTAGAGTCAAGGCAAAAGGGACTCAAGACCCATTTTCACATGGTATTGCTCGTTATGCTCCTTGGCAAACGAC
ATTTACTCAAACTCAATTAAATGGCCTGCTAACAGGAAAAGATCTCTGGAATGGGGTTCTTCTTTCCACATTAGAAGGAC
AGAATTTTAAGTTTGAATTACAAGCTGATTTAACGACGACTGGACTTTCTCTACAACTTTCTATTATTAGTGATACAAAT
TCCCTTGTAGGTATTCACTATTACTACTCTCTTCCCAACCATCGAGGGAAAATAACTAGTTTTGTGCAAGATAAAGTGAG
AATAGAAGATTGCCTTCAATCGATTCCCTCATTTTGGTCATTTGATTTGAAACAACAATTAGTTTTTGATTTAAAAGAAG
AAGCAGATTTTACTTTTAGGCCTTTCCCAGACCCTTTAATGGGAGAAATTTTATTAGAAACAGATACTTATTCTTTAAAA
ACACGTTATCAATCTGTTTGTGAAGAAAATTGTTGGCAACTTTATCATCCTAAAGACGCATCATTTGTGTGTATTGAACC
AATTAGCTCTCAAAATCCTAAACATCCTAATTTGAACATTAGTCAGCTACAAATTTATTTAGAAATTTTACCCCTTTCTT
AA

Upstream 100 bases:

>100_bases
TCGAGTAATTTTATATAAAAATTAAATTTTTACTTTGTTAAAAAAGATTTCTTATTCATGATGCACATTTAAAAGAATCT
AACCGATAGTTGTTTGCTCC

Downstream 100 bases:

>100_bases
GAAGATATAAGATAATAAAAACATGACTGAAAAAGAACCTACAACTACTAATCAAGATTTTTCTTCTCTTAATCTAGATC
TTCTCAATAAGAAAAAAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MNIIKLENRTEDGEKLEATFAPDHGLNLISFKRGNIEVIEQSTWNLFEERFAGLGALIGPHFHRRRAESLPKIADETLFP
HIGRVKAKGTQDPFSHGIARYAPWQTTFTQTQLNGLLTGKDLWNGVLLSTLEGQNFKFELQADLTTTGLSLQLSIISDTN
SLVGIHYYYSLPNHRGKITSFVQDKVRIEDCLQSIPSFWSFDLKQQLVFDLKEEADFTFRPFPDPLMGEILLETDTYSLK
TRYQSVCEENCWQLYHPKDASFVCIEPISSQNPKHPNLNISQLQIYLEILPLS

Sequences:

>Translated_293_residues
MNIIKLENRTEDGEKLEATFAPDHGLNLISFKRGNIEVIEQSTWNLFEERFAGLGALIGPHFHRRRAESLPKIADETLFP
HIGRVKAKGTQDPFSHGIARYAPWQTTFTQTQLNGLLTGKDLWNGVLLSTLEGQNFKFELQADLTTTGLSLQLSIISDTN
SLVGIHYYYSLPNHRGKITSFVQDKVRIEDCLQSIPSFWSFDLKQQLVFDLKEEADFTFRPFPDPLMGEILLETDTYSLK
TRYQSVCEENCWQLYHPKDASFVCIEPISSQNPKHPNLNISQLQIYLEILPLS
>Mature_293_residues
MNIIKLENRTEDGEKLEATFAPDHGLNLISFKRGNIEVIEQSTWNLFEERFAGLGALIGPHFHRRRAESLPKIADETLFP
HIGRVKAKGTQDPFSHGIARYAPWQTTFTQTQLNGLLTGKDLWNGVLLSTLEGQNFKFELQADLTTTGLSLQLSIISDTN
SLVGIHYYYSLPNHRGKITSFVQDKVRIEDCLQSIPSFWSFDLKQQLVFDLKEEADFTFRPFPDPLMGEILLETDTYSLK
TRYQSVCEENCWQLYHPKDASFVCIEPISSQNPKHPNLNISQLQIYLEILPLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33506; Mature: 33506

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIIKLENRTEDGEKLEATFAPDHGLNLISFKRGNIEVIEQSTWNLFEERFAGLGALIGP
CCEEEECCCCCCCCEEEEEECCCCCCEEEEEECCCEEEEECHHHHHHHHHHHHHHHHHCH
HFHRRRAESLPKIADETLFPHIGRVKAKGTQDPFSHGIARYAPWQTTFTQTQLNGLLTGK
HHHHHHHHHCHHHHHHHHCCCCCCEECCCCCCHHHCCHHHCCCCCCCHHHHHHCCEEECH
DLWNGVLLSTLEGQNFKFELQADLTTTGLSLQLSIISDTNSLVGIHYYYSLPNHRGKITS
HHHCCCEEEEECCCCEEEEEEECEEECCEEEEEEEEECCCCEEEEEEEEECCCCCCHHHH
FVQDKVRIEDCLQSIPSFWSFDLKQQLVFDLKEEADFTFRPFPDPLMGEILLETDTYSLK
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEECCCCCHHHCCEEEECCCHHHH
TRYQSVCEENCWQLYHPKDASFVCIEPISSQNPKHPNLNISQLQIYLEILPLS
HHHHHHHHHCCEEEECCCCCCEEEEECCCCCCCCCCCCCHHHEEEEEEEEECC
>Mature Secondary Structure
MNIIKLENRTEDGEKLEATFAPDHGLNLISFKRGNIEVIEQSTWNLFEERFAGLGALIGP
CCEEEECCCCCCCCEEEEEECCCCCCEEEEEECCCEEEEECHHHHHHHHHHHHHHHHHCH
HFHRRRAESLPKIADETLFPHIGRVKAKGTQDPFSHGIARYAPWQTTFTQTQLNGLLTGK
HHHHHHHHHCHHHHHHHHCCCCCCEECCCCCCHHHCCHHHCCCCCCCHHHHHHCCEEECH
DLWNGVLLSTLEGQNFKFELQADLTTTGLSLQLSIISDTNSLVGIHYYYSLPNHRGKITS
HHHCCCEEEEECCCCEEEEEEECEEECCEEEEEEEEECCCCEEEEEEEEECCCCCCHHHH
FVQDKVRIEDCLQSIPSFWSFDLKQQLVFDLKEEADFTFRPFPDPLMGEILLETDTYSLK
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEECCCCCHHHCCEEEECCCHHHH
TRYQSVCEENCWQLYHPKDASFVCIEPISSQNPKHPNLNISQLQIYLEILPLS
HHHHHHHHHCCEEEECCCCCCEEEEECCCCCCCCCCCCCHHHEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA