| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46445763
Identifier: 46445763
GI number: 46445763
Start: 199698
End: 200579
Strand: Reverse
Name: 46445763
Synonym: pc0129
Alternate gene names: NA
Gene position: 200579-199698 (Counterclockwise)
Preceding gene: 46445764
Following gene: 46445762
Centisome position: 8.31
GC content: 35.26
Gene sequence:
>882_bases ATGAATATAATTAAACTAGAAAATCGAACTGAAGACGGAGAAAAACTAGAGGCTACTTTTGCTCCTGACCATGGACTAAA TCTCATCAGCTTCAAAAGAGGAAATATTGAAGTCATTGAACAATCGACTTGGAATCTTTTTGAAGAGCGATTTGCTGGTT TAGGAGCATTAATTGGTCCACACTTTCATCGCCGACGAGCAGAAAGCCTTCCTAAAATTGCAGATGAAACACTTTTTCCC CACATTGGTAGAGTCAAGGCAAAAGGGACTCAAGACCCATTTTCACATGGTATTGCTCGTTATGCTCCTTGGCAAACGAC ATTTACTCAAACTCAATTAAATGGCCTGCTAACAGGAAAAGATCTCTGGAATGGGGTTCTTCTTTCCACATTAGAAGGAC AGAATTTTAAGTTTGAATTACAAGCTGATTTAACGACGACTGGACTTTCTCTACAACTTTCTATTATTAGTGATACAAAT TCCCTTGTAGGTATTCACTATTACTACTCTCTTCCCAACCATCGAGGGAAAATAACTAGTTTTGTGCAAGATAAAGTGAG AATAGAAGATTGCCTTCAATCGATTCCCTCATTTTGGTCATTTGATTTGAAACAACAATTAGTTTTTGATTTAAAAGAAG AAGCAGATTTTACTTTTAGGCCTTTCCCAGACCCTTTAATGGGAGAAATTTTATTAGAAACAGATACTTATTCTTTAAAA ACACGTTATCAATCTGTTTGTGAAGAAAATTGTTGGCAACTTTATCATCCTAAAGACGCATCATTTGTGTGTATTGAACC AATTAGCTCTCAAAATCCTAAACATCCTAATTTGAACATTAGTCAGCTACAAATTTATTTAGAAATTTTACCCCTTTCTT AA
Upstream 100 bases:
>100_bases TCGAGTAATTTTATATAAAAATTAAATTTTTACTTTGTTAAAAAAGATTTCTTATTCATGATGCACATTTAAAAGAATCT AACCGATAGTTGTTTGCTCC
Downstream 100 bases:
>100_bases GAAGATATAAGATAATAAAAACATGACTGAAAAAGAACCTACAACTACTAATCAAGATTTTTCTTCTCTTAATCTAGATC TTCTCAATAAGAAAAAAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MNIIKLENRTEDGEKLEATFAPDHGLNLISFKRGNIEVIEQSTWNLFEERFAGLGALIGPHFHRRRAESLPKIADETLFP HIGRVKAKGTQDPFSHGIARYAPWQTTFTQTQLNGLLTGKDLWNGVLLSTLEGQNFKFELQADLTTTGLSLQLSIISDTN SLVGIHYYYSLPNHRGKITSFVQDKVRIEDCLQSIPSFWSFDLKQQLVFDLKEEADFTFRPFPDPLMGEILLETDTYSLK TRYQSVCEENCWQLYHPKDASFVCIEPISSQNPKHPNLNISQLQIYLEILPLS
Sequences:
>Translated_293_residues MNIIKLENRTEDGEKLEATFAPDHGLNLISFKRGNIEVIEQSTWNLFEERFAGLGALIGPHFHRRRAESLPKIADETLFP HIGRVKAKGTQDPFSHGIARYAPWQTTFTQTQLNGLLTGKDLWNGVLLSTLEGQNFKFELQADLTTTGLSLQLSIISDTN SLVGIHYYYSLPNHRGKITSFVQDKVRIEDCLQSIPSFWSFDLKQQLVFDLKEEADFTFRPFPDPLMGEILLETDTYSLK TRYQSVCEENCWQLYHPKDASFVCIEPISSQNPKHPNLNISQLQIYLEILPLS >Mature_293_residues MNIIKLENRTEDGEKLEATFAPDHGLNLISFKRGNIEVIEQSTWNLFEERFAGLGALIGPHFHRRRAESLPKIADETLFP HIGRVKAKGTQDPFSHGIARYAPWQTTFTQTQLNGLLTGKDLWNGVLLSTLEGQNFKFELQADLTTTGLSLQLSIISDTN SLVGIHYYYSLPNHRGKITSFVQDKVRIEDCLQSIPSFWSFDLKQQLVFDLKEEADFTFRPFPDPLMGEILLETDTYSLK TRYQSVCEENCWQLYHPKDASFVCIEPISSQNPKHPNLNISQLQIYLEILPLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33506; Mature: 33506
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIIKLENRTEDGEKLEATFAPDHGLNLISFKRGNIEVIEQSTWNLFEERFAGLGALIGP CCEEEECCCCCCCCEEEEEECCCCCCEEEEEECCCEEEEECHHHHHHHHHHHHHHHHHCH HFHRRRAESLPKIADETLFPHIGRVKAKGTQDPFSHGIARYAPWQTTFTQTQLNGLLTGK HHHHHHHHHCHHHHHHHHCCCCCCEECCCCCCHHHCCHHHCCCCCCCHHHHHHCCEEECH DLWNGVLLSTLEGQNFKFELQADLTTTGLSLQLSIISDTNSLVGIHYYYSLPNHRGKITS HHHCCCEEEEECCCCEEEEEEECEEECCEEEEEEEEECCCCEEEEEEEEECCCCCCHHHH FVQDKVRIEDCLQSIPSFWSFDLKQQLVFDLKEEADFTFRPFPDPLMGEILLETDTYSLK HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEECCCCCHHHCCEEEECCCHHHH TRYQSVCEENCWQLYHPKDASFVCIEPISSQNPKHPNLNISQLQIYLEILPLS HHHHHHHHHCCEEEECCCCCCEEEEECCCCCCCCCCCCCHHHEEEEEEEEECC >Mature Secondary Structure MNIIKLENRTEDGEKLEATFAPDHGLNLISFKRGNIEVIEQSTWNLFEERFAGLGALIGP CCEEEECCCCCCCCEEEEEECCCCCCEEEEEECCCEEEEECHHHHHHHHHHHHHHHHHCH HFHRRRAESLPKIADETLFPHIGRVKAKGTQDPFSHGIARYAPWQTTFTQTQLNGLLTGK HHHHHHHHHCHHHHHHHHCCCCCCEECCCCCCHHHCCHHHCCCCCCCHHHHHHCCEEECH DLWNGVLLSTLEGQNFKFELQADLTTTGLSLQLSIISDTNSLVGIHYYYSLPNHRGKITS HHHCCCEEEEECCCCEEEEEEECEEECCEEEEEEEEECCCCEEEEEEEEECCCCCCHHHH FVQDKVRIEDCLQSIPSFWSFDLKQQLVFDLKEEADFTFRPFPDPLMGEILLETDTYSLK HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEECCCCCHHHCCEEEECCCHHHH TRYQSVCEENCWQLYHPKDASFVCIEPISSQNPKHPNLNISQLQIYLEILPLS HHHHHHHHHCCEEEECCCCCCEEEEECCCCCCCCCCCCCHHHEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA