Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

Click here to switch to the map view.

The map label for this gene is 46445704

Identifier: 46445704

GI number: 46445704

Start: 127768

End: 128007

Strand: Reverse

Name: 46445704

Synonym: pc0070

Alternate gene names: NA

Gene position: 128007-127768 (Counterclockwise)

Preceding gene: 46445705

Following gene: 161611311

Centisome position: 5.3

GC content: 35.0

Gene sequence:

>240_bases
ATGTCCTTAAGTTTGTTGTACGCCAAGCCTGGTGCTTTTAATTTTTTGCGTGCGAAATTGGAAAGTCATACATGGGGAAA
AATAACTTTCGCTTATGATTTTTATGGCCGCAAATTTTTGCCTGCTCTCTCCCCTCAATATGACATTCAATTAAGAACTT
TTGAAAAAATCAAAAATGTGATGGATGGCCTCTATTTTATCACTTTTTTTCCTCCACGAATTTCATATCGATTTGACTAA

Upstream 100 bases:

>100_bases
TGCTCAAATAATCTTAGGGTTTGCCCTTTTTTCTATTGGAAAGGCTGGTAGTCAATTAAATTGAATACACTCAAATTATT
TAGGTATTTATCAACAGACC

Downstream 100 bases:

>100_bases
AGTTTGCAATGAAATTCCATTTTTTCAATATTCTTTATTCATCCGATATGTTAAAGCTCTTGTATAATAAAGGTTTTTAA
AAAATTCAGGAAAGTTCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 79; Mature: 78

Protein sequence:

>79_residues
MSLSLLYAKPGAFNFLRAKLESHTWGKITFAYDFYGRKFLPALSPQYDIQLRTFEKIKNVMDGLYFITFFPPRISYRFD

Sequences:

>Translated_79_residues
MSLSLLYAKPGAFNFLRAKLESHTWGKITFAYDFYGRKFLPALSPQYDIQLRTFEKIKNVMDGLYFITFFPPRISYRFD
>Mature_78_residues
SLSLLYAKPGAFNFLRAKLESHTWGKITFAYDFYGRKFLPALSPQYDIQLRTFEKIKNVMDGLYFITFFPPRISYRFD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9400; Mature: 9269

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSLLYAKPGAFNFLRAKLESHTWGKITFAYDFYGRKFLPALSPQYDIQLRTFEKIKNV
CCEEEEEECCCCCHHHHHHHCCCCCCEEEEEEECCCCEECCCCCCCCEEEEHHHHHHHHH
MDGLYFITFFPPRISYRFD
HCCEEEEEECCCEEEEECC
>Mature Secondary Structure 
SLSLLYAKPGAFNFLRAKLESHTWGKITFAYDFYGRKFLPALSPQYDIQLRTFEKIKNV
CEEEEEECCCCCHHHHHHHCCCCCCEEEEEEECCCCEECCCCCCCCEEEEHHHHHHHHH
MDGLYFITFFPPRISYRFD
HCCEEEEEECCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA