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The map label for this gene is yoqW [H]

Identifier: 46445695

GI number: 46445695

Start: 116938

End: 117600

Strand: Reverse

Name: yoqW [H]

Synonym: pc0061

Alternate gene names: 46445695

Gene position: 117600-116938 (Counterclockwise)

Preceding gene: 46445696

Following gene: 46445694

Centisome position: 4.87

GC content: 34.69

Gene sequence:

>663_bases
ATGTGCGGGCGTTTTACATTGACTGCAGAGGCTATTAATCTATCCGAGCGTTTTGAAATCCCTTTGAAAGAATTCACATG
GCTTCCTCGCTTTAATATAGCTCCTTCCCAATCATGCCTTACGATTTTCATAGAAAATCAACAAAGACAAATCGATTCAA
TGGTTTGGGGATTAATTCCCCACTGGAGCAAAGAAAAAAGATCTAATTATCAAATGATTAATGTGCGTTCTGAAACATTA
AAAAGTAAACCCTCTTTCCAAAATTTATTTAAAACTAGGCGTTGCTTAATCCCTGCGGATGGTTTTTTCGAATGGAAAGC
CACGAGATCAGGAAAAATTCCATTTCGAATCACGTTAAAAAATGGTGATTTATTTGCTTTTGCTGGAATATGGGACATTT
GGAAGGATAAAAATGGAGAAGAAATCAAAAGCTTTGCAATTCTCACCACAGCTTCCAATTCAGTGGTGAATCCTATACAT
AATCGCATGCCTGTTATTCTACAAAAAACAGATGAAGCTATGTGGTTAAATTCTTCTAATCAAATTGCTCTCGAGCAAAT
TCTGCAGAAAACTTATCCATCGAATGAAATTATTTCGTATGAAGTTTCAAATATTGTAAATTTTTGGAAAAATGACTATC
CAATTTGTATTCAGCCTATTTGA

Upstream 100 bases:

>100_bases
GTCTTATCATTCATACATCTAGAAAGAGGAAAATTATAACTTTATAGCATCAAATCCAGAAATTTTTATAATATTAGGAC
TCATAAAATGAGGTTAAAAC

Downstream 100 bases:

>100_bases
TTCACGCCTGCATAAATATAATAATAAAGCAATTGTAAAATAAATTATTGTTTGCAGAAGCCCAAGCAATTTGCAGATAT
ATTTGAAAAAGACTCTCTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MCGRFTLTAEAINLSERFEIPLKEFTWLPRFNIAPSQSCLTIFIENQQRQIDSMVWGLIPHWSKEKRSNYQMINVRSETL
KSKPSFQNLFKTRRCLIPADGFFEWKATRSGKIPFRITLKNGDLFAFAGIWDIWKDKNGEEIKSFAILTTASNSVVNPIH
NRMPVILQKTDEAMWLNSSNQIALEQILQKTYPSNEIISYEVSNIVNFWKNDYPICIQPI

Sequences:

>Translated_220_residues
MCGRFTLTAEAINLSERFEIPLKEFTWLPRFNIAPSQSCLTIFIENQQRQIDSMVWGLIPHWSKEKRSNYQMINVRSETL
KSKPSFQNLFKTRRCLIPADGFFEWKATRSGKIPFRITLKNGDLFAFAGIWDIWKDKNGEEIKSFAILTTASNSVVNPIH
NRMPVILQKTDEAMWLNSSNQIALEQILQKTYPSNEIISYEVSNIVNFWKNDYPICIQPI
>Mature_220_residues
MCGRFTLTAEAINLSERFEIPLKEFTWLPRFNIAPSQSCLTIFIENQQRQIDSMVWGLIPHWSKEKRSNYQMINVRSETL
KSKPSFQNLFKTRRCLIPADGFFEWKATRSGKIPFRITLKNGDLFAFAGIWDIWKDKNGEEIKSFAILTTASNSVVNPIH
NRMPVILQKTDEAMWLNSSNQIALEQILQKTYPSNEIISYEVSNIVNFWKNDYPICIQPI

Specific function: Unknown

COG id: COG2135

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0361 family [H]

Homologues:

Organism=Homo sapiens, GI54607106, Length=271, Percent_Identity=28.0442804428044, Blast_Score=99, Evalue=3e-21,
Organism=Homo sapiens, GI54607104, Length=271, Percent_Identity=28.0442804428044, Blast_Score=99, Evalue=3e-21,
Organism=Escherichia coli, GI48994894, Length=228, Percent_Identity=29.3859649122807, Blast_Score=90, Evalue=1e-19,
Organism=Saccharomyces cerevisiae, GI6323761, Length=199, Percent_Identity=26.1306532663317, Blast_Score=79, Evalue=4e-16,
Organism=Drosophila melanogaster, GI21355761, Length=225, Percent_Identity=28.4444444444444, Blast_Score=88, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003738 [H]

Pfam domain/function: PF02586 DUF159 [H]

EC number: NA

Molecular weight: Translated: 25628; Mature: 25628

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCGRFTLTAEAINLSERFEIPLKEFTWLPRFNIAPSQSCLTIFIENQQRQIDSMVWGLIP
CCCCEEEEHHEECCHHHCCCCHHHCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHCC
HWSKEKRSNYQMINVRSETLKSKPSFQNLFKTRRCLIPADGFFEWKATRSGKIPFRITLK
CCCCHHCCCEEEEEEEHHHHCCCCCHHHHHHHHHEECCCCCCEEEEECCCCCCCEEEEEE
NGDLFAFAGIWDIWKDKNGEEIKSFAILTTASNSVVNPIHNRMPVILQKTDEAMWLNSSN
CCCEEEEECCHHHHCCCCCCCEEEEEEEEECCCCHHCHHHCCCCEEEEECCCEEEECCCC
QIALEQILQKTYPSNEIISYEVSNIVNFWKNDYPICIQPI
CHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCCCCEEEECC
>Mature Secondary Structure
MCGRFTLTAEAINLSERFEIPLKEFTWLPRFNIAPSQSCLTIFIENQQRQIDSMVWGLIP
CCCCEEEEHHEECCHHHCCCCHHHCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHCC
HWSKEKRSNYQMINVRSETLKSKPSFQNLFKTRRCLIPADGFFEWKATRSGKIPFRITLK
CCCCHHCCCEEEEEEEHHHHCCCCCHHHHHHHHHEECCCCCCEEEEECCCCCCCEEEEEE
NGDLFAFAGIWDIWKDKNGEEIKSFAILTTASNSVVNPIHNRMPVILQKTDEAMWLNSSN
CCCEEEEECCHHHHCCCCCCCEEEEEEEEECCCCHHCHHHCCCCEEEEECCCEEEECCCC
QIALEQILQKTYPSNEIISYEVSNIVNFWKNDYPICIQPI
CHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]