| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46445677
Identifier: 46445677
GI number: 46445677
Start: 72654
End: 73982
Strand: Reverse
Name: 46445677
Synonym: pc0043
Alternate gene names: NA
Gene position: 73982-72654 (Counterclockwise)
Preceding gene: 46445678
Following gene: 46445676
Centisome position: 3.06
GC content: 35.89
Gene sequence:
>1329_bases ATGATAAATAATACTACTCTTCAAAGTTTAACTGAGGGAGCCTACAGAATTCACAGTTGTCTAAAAGATGGACAGTTTGA CCATGCACAAGCGACACAAGAGGCAGATAATCTTTATCAAGAAGGAGTTCAATTAGTTATTGCTGAAGTCAATTCGAATC CTATTTTTAAAGATGTTGTTTCCCCTGTTGTCTGTAGATTAAATGAGATCGTTTCGTTAGAAGACACTCAACACTTAGCT TCTTTTCATCGATCCTTAAGTAAAGTTTATCGCCTCTTTATAGAGATCACTTGGTACCAATGTTTGCGCCAGGGTTCTTT GCCAACCTGGAACAAAACTCGCGATTCAATTATCACAAATTCTAGAAGCATTCATTCCATTTTGCCAGAAAAAGAAATTG GCACACGGTTTGAATACCGTTGTGCGGAACAAGCAGCTAAATGCTTAACAGTTGTCAAGAGTATTTGGAAGAAATATCCT AATCATATCCTTAATATTGGGGAATCAGCCGAAGGAAGTTCTTTCTTTGGAGTTATAAAAGGTTTTCAAGAGCTTAATAA AGATGTCAAAAAAGACTGGCTTCAAGCATGGTATCCCTATATTCATGAACTACGATGGCTTTCTGCAAATATTAAAACCC AAAAAGATTTTAAAAATATTATTGGAACAAGACTCAAAGACTTTCAGGACAAAGGAAAAAAATACACTGTGTGCTTAGCC CTGACCTTTGTGGATTTGATTAAAAATCCTGGTGTGACTGAAAATGTCAGAAAATTAGCCTCTGAACAGCTTGCAAACCT TTTTCTTCTTAGAGACCAGGATAGATTATCAACGCTTACAGAACGAGCTCTAGGAAAATTTCCAAATGTTAAACTTCTTC AGAAAACTGTCAAAAATGAAGATCGCTATTGGAAAACTCGTTCTCTGATTATGCAGAGTTTAGAAAAGTTAGCTGAAGAT TCGGCTTATAAAGAATATATCCGGGATAGTATAAAAAGTTTAAGAGAGGTTCGAACGCATTCTATCCACGCCGAAGAAAA AGAGGAAATTCAGAAAAGTCTCAAAATATTAGAAGAAGACAAGGAAGAATTTCAGAAGGCTATTGAACAAGATGAGTCAA GCCTGGCAGCTAAAAAAGGGAAAAAGCAACGAGGCGAAGATGATATTGAAGAATTAGAAGCAAAGCTTAAAAACGACATA GAGGAAAAAGGAAATATAGAGCGCGATCTTGAAGCCATGTATTTAGTTGAAAAGGCATTAGAAGAACTTCATGATGAAGA AGAAGAGTATGAAAATCGTCTTGAAGCAATTTGGAATTCCTATAGCTAA
Upstream 100 bases:
>100_bases CTTATCGGGACTACATGAATAAACAAGAAAAAAATTTTAGAGCTTATTAAAAAATGGTTAATTGAATGTTTTAGAAATTA TTACCTTAAGGAGGTTTTTT
Downstream 100 bases:
>100_bases TAATTAGAAAAGATTTGCCTGAGACTTTGTCTTTTGCTTCGAGGGAATAGCTAAAGTGGTTATTTCTGAGAAGCAAAAGG ATTGAAAAAGGGTGGAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 442; Mature: 442
Protein sequence:
>442_residues MINNTTLQSLTEGAYRIHSCLKDGQFDHAQATQEADNLYQEGVQLVIAEVNSNPIFKDVVSPVVCRLNEIVSLEDTQHLA SFHRSLSKVYRLFIEITWYQCLRQGSLPTWNKTRDSIITNSRSIHSILPEKEIGTRFEYRCAEQAAKCLTVVKSIWKKYP NHILNIGESAEGSSFFGVIKGFQELNKDVKKDWLQAWYPYIHELRWLSANIKTQKDFKNIIGTRLKDFQDKGKKYTVCLA LTFVDLIKNPGVTENVRKLASEQLANLFLLRDQDRLSTLTERALGKFPNVKLLQKTVKNEDRYWKTRSLIMQSLEKLAED SAYKEYIRDSIKSLREVRTHSIHAEEKEEIQKSLKILEEDKEEFQKAIEQDESSLAAKKGKKQRGEDDIEELEAKLKNDI EEKGNIERDLEAMYLVEKALEELHDEEEEYENRLEAIWNSYS
Sequences:
>Translated_442_residues MINNTTLQSLTEGAYRIHSCLKDGQFDHAQATQEADNLYQEGVQLVIAEVNSNPIFKDVVSPVVCRLNEIVSLEDTQHLA SFHRSLSKVYRLFIEITWYQCLRQGSLPTWNKTRDSIITNSRSIHSILPEKEIGTRFEYRCAEQAAKCLTVVKSIWKKYP NHILNIGESAEGSSFFGVIKGFQELNKDVKKDWLQAWYPYIHELRWLSANIKTQKDFKNIIGTRLKDFQDKGKKYTVCLA LTFVDLIKNPGVTENVRKLASEQLANLFLLRDQDRLSTLTERALGKFPNVKLLQKTVKNEDRYWKTRSLIMQSLEKLAED SAYKEYIRDSIKSLREVRTHSIHAEEKEEIQKSLKILEEDKEEFQKAIEQDESSLAAKKGKKQRGEDDIEELEAKLKNDI EEKGNIERDLEAMYLVEKALEELHDEEEEYENRLEAIWNSYS >Mature_442_residues MINNTTLQSLTEGAYRIHSCLKDGQFDHAQATQEADNLYQEGVQLVIAEVNSNPIFKDVVSPVVCRLNEIVSLEDTQHLA SFHRSLSKVYRLFIEITWYQCLRQGSLPTWNKTRDSIITNSRSIHSILPEKEIGTRFEYRCAEQAAKCLTVVKSIWKKYP NHILNIGESAEGSSFFGVIKGFQELNKDVKKDWLQAWYPYIHELRWLSANIKTQKDFKNIIGTRLKDFQDKGKKYTVCLA LTFVDLIKNPGVTENVRKLASEQLANLFLLRDQDRLSTLTERALGKFPNVKLLQKTVKNEDRYWKTRSLIMQSLEKLAED SAYKEYIRDSIKSLREVRTHSIHAEEKEEIQKSLKILEEDKEEFQKAIEQDESSLAAKKGKKQRGEDDIEELEAKLKNDI EEKGNIERDLEAMYLVEKALEELHDEEEEYENRLEAIWNSYS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51433; Mature: 51433
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINNTTLQSLTEGAYRIHSCLKDGQFDHAQATQEADNLYQEGVQLVIAEVNSNPIFKDVV CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEHHHCCCCCCHHHHH SPVVCRLNEIVSLEDTQHLASFHRSLSKVYRLFIEITWYQCLRQGSLPTWNKTRDSIITN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHC SRSIHSILPEKEIGTRFEYRCAEQAAKCLTVVKSIWKKYPNHILNIGESAEGSSFFGVIK CHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHH GFQELNKDVKKDWLQAWYPYIHELRWLSANIKTQKDFKNIIGTRLKDFQDKGKKYTVCLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEHHHH LTFVDLIKNPGVTENVRKLASEQLANLFLLRDQDRLSTLTERALGKFPNVKLLQKTVKNE HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHCH DRYWKTRSLIMQSLEKLAEDSAYKEYIRDSIKSLREVRTHSIHAEEKEEIQKSLKILEED HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH KEEFQKAIEQDESSLAAKKGKKQRGEDDIEELEAKLKNDIEEKGNIERDLEAMYLVEKAL HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH EELHDEEEEYENRLEAIWNSYS HHHHCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MINNTTLQSLTEGAYRIHSCLKDGQFDHAQATQEADNLYQEGVQLVIAEVNSNPIFKDVV CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEHHHCCCCCCHHHHH SPVVCRLNEIVSLEDTQHLASFHRSLSKVYRLFIEITWYQCLRQGSLPTWNKTRDSIITN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHC SRSIHSILPEKEIGTRFEYRCAEQAAKCLTVVKSIWKKYPNHILNIGESAEGSSFFGVIK CHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHH GFQELNKDVKKDWLQAWYPYIHELRWLSANIKTQKDFKNIIGTRLKDFQDKGKKYTVCLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEHHHH LTFVDLIKNPGVTENVRKLASEQLANLFLLRDQDRLSTLTERALGKFPNVKLLQKTVKNE HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHCH DRYWKTRSLIMQSLEKLAEDSAYKEYIRDSIKSLREVRTHSIHAEEKEEIQKSLKILEED HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH KEEFQKAIEQDESSLAAKKGKKQRGEDDIEELEAKLKNDIEEKGNIERDLEAMYLVEKAL HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH EELHDEEEEYENRLEAIWNSYS HHHHCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA