Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46445677

Identifier: 46445677

GI number: 46445677

Start: 72654

End: 73982

Strand: Reverse

Name: 46445677

Synonym: pc0043

Alternate gene names: NA

Gene position: 73982-72654 (Counterclockwise)

Preceding gene: 46445678

Following gene: 46445676

Centisome position: 3.06

GC content: 35.89

Gene sequence:

>1329_bases
ATGATAAATAATACTACTCTTCAAAGTTTAACTGAGGGAGCCTACAGAATTCACAGTTGTCTAAAAGATGGACAGTTTGA
CCATGCACAAGCGACACAAGAGGCAGATAATCTTTATCAAGAAGGAGTTCAATTAGTTATTGCTGAAGTCAATTCGAATC
CTATTTTTAAAGATGTTGTTTCCCCTGTTGTCTGTAGATTAAATGAGATCGTTTCGTTAGAAGACACTCAACACTTAGCT
TCTTTTCATCGATCCTTAAGTAAAGTTTATCGCCTCTTTATAGAGATCACTTGGTACCAATGTTTGCGCCAGGGTTCTTT
GCCAACCTGGAACAAAACTCGCGATTCAATTATCACAAATTCTAGAAGCATTCATTCCATTTTGCCAGAAAAAGAAATTG
GCACACGGTTTGAATACCGTTGTGCGGAACAAGCAGCTAAATGCTTAACAGTTGTCAAGAGTATTTGGAAGAAATATCCT
AATCATATCCTTAATATTGGGGAATCAGCCGAAGGAAGTTCTTTCTTTGGAGTTATAAAAGGTTTTCAAGAGCTTAATAA
AGATGTCAAAAAAGACTGGCTTCAAGCATGGTATCCCTATATTCATGAACTACGATGGCTTTCTGCAAATATTAAAACCC
AAAAAGATTTTAAAAATATTATTGGAACAAGACTCAAAGACTTTCAGGACAAAGGAAAAAAATACACTGTGTGCTTAGCC
CTGACCTTTGTGGATTTGATTAAAAATCCTGGTGTGACTGAAAATGTCAGAAAATTAGCCTCTGAACAGCTTGCAAACCT
TTTTCTTCTTAGAGACCAGGATAGATTATCAACGCTTACAGAACGAGCTCTAGGAAAATTTCCAAATGTTAAACTTCTTC
AGAAAACTGTCAAAAATGAAGATCGCTATTGGAAAACTCGTTCTCTGATTATGCAGAGTTTAGAAAAGTTAGCTGAAGAT
TCGGCTTATAAAGAATATATCCGGGATAGTATAAAAAGTTTAAGAGAGGTTCGAACGCATTCTATCCACGCCGAAGAAAA
AGAGGAAATTCAGAAAAGTCTCAAAATATTAGAAGAAGACAAGGAAGAATTTCAGAAGGCTATTGAACAAGATGAGTCAA
GCCTGGCAGCTAAAAAAGGGAAAAAGCAACGAGGCGAAGATGATATTGAAGAATTAGAAGCAAAGCTTAAAAACGACATA
GAGGAAAAAGGAAATATAGAGCGCGATCTTGAAGCCATGTATTTAGTTGAAAAGGCATTAGAAGAACTTCATGATGAAGA
AGAAGAGTATGAAAATCGTCTTGAAGCAATTTGGAATTCCTATAGCTAA

Upstream 100 bases:

>100_bases
CTTATCGGGACTACATGAATAAACAAGAAAAAAATTTTAGAGCTTATTAAAAAATGGTTAATTGAATGTTTTAGAAATTA
TTACCTTAAGGAGGTTTTTT

Downstream 100 bases:

>100_bases
TAATTAGAAAAGATTTGCCTGAGACTTTGTCTTTTGCTTCGAGGGAATAGCTAAAGTGGTTATTTCTGAGAAGCAAAAGG
ATTGAAAAAGGGTGGAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 442; Mature: 442

Protein sequence:

>442_residues
MINNTTLQSLTEGAYRIHSCLKDGQFDHAQATQEADNLYQEGVQLVIAEVNSNPIFKDVVSPVVCRLNEIVSLEDTQHLA
SFHRSLSKVYRLFIEITWYQCLRQGSLPTWNKTRDSIITNSRSIHSILPEKEIGTRFEYRCAEQAAKCLTVVKSIWKKYP
NHILNIGESAEGSSFFGVIKGFQELNKDVKKDWLQAWYPYIHELRWLSANIKTQKDFKNIIGTRLKDFQDKGKKYTVCLA
LTFVDLIKNPGVTENVRKLASEQLANLFLLRDQDRLSTLTERALGKFPNVKLLQKTVKNEDRYWKTRSLIMQSLEKLAED
SAYKEYIRDSIKSLREVRTHSIHAEEKEEIQKSLKILEEDKEEFQKAIEQDESSLAAKKGKKQRGEDDIEELEAKLKNDI
EEKGNIERDLEAMYLVEKALEELHDEEEEYENRLEAIWNSYS

Sequences:

>Translated_442_residues
MINNTTLQSLTEGAYRIHSCLKDGQFDHAQATQEADNLYQEGVQLVIAEVNSNPIFKDVVSPVVCRLNEIVSLEDTQHLA
SFHRSLSKVYRLFIEITWYQCLRQGSLPTWNKTRDSIITNSRSIHSILPEKEIGTRFEYRCAEQAAKCLTVVKSIWKKYP
NHILNIGESAEGSSFFGVIKGFQELNKDVKKDWLQAWYPYIHELRWLSANIKTQKDFKNIIGTRLKDFQDKGKKYTVCLA
LTFVDLIKNPGVTENVRKLASEQLANLFLLRDQDRLSTLTERALGKFPNVKLLQKTVKNEDRYWKTRSLIMQSLEKLAED
SAYKEYIRDSIKSLREVRTHSIHAEEKEEIQKSLKILEEDKEEFQKAIEQDESSLAAKKGKKQRGEDDIEELEAKLKNDI
EEKGNIERDLEAMYLVEKALEELHDEEEEYENRLEAIWNSYS
>Mature_442_residues
MINNTTLQSLTEGAYRIHSCLKDGQFDHAQATQEADNLYQEGVQLVIAEVNSNPIFKDVVSPVVCRLNEIVSLEDTQHLA
SFHRSLSKVYRLFIEITWYQCLRQGSLPTWNKTRDSIITNSRSIHSILPEKEIGTRFEYRCAEQAAKCLTVVKSIWKKYP
NHILNIGESAEGSSFFGVIKGFQELNKDVKKDWLQAWYPYIHELRWLSANIKTQKDFKNIIGTRLKDFQDKGKKYTVCLA
LTFVDLIKNPGVTENVRKLASEQLANLFLLRDQDRLSTLTERALGKFPNVKLLQKTVKNEDRYWKTRSLIMQSLEKLAED
SAYKEYIRDSIKSLREVRTHSIHAEEKEEIQKSLKILEEDKEEFQKAIEQDESSLAAKKGKKQRGEDDIEELEAKLKNDI
EEKGNIERDLEAMYLVEKALEELHDEEEEYENRLEAIWNSYS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51433; Mature: 51433

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure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HHHHCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA